Pseudoliparis swirei (Mariana hadal snailfish): 130205662
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Entry
130205662 CDS
T09868
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog
KO
K06788
coxsackievirus and adenovirus receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03267
Virion - Adenovirus
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
130205662
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130205662
04517 IgSF CAM signaling
130205662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130205662
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
CTX family
130205662
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Ig_2
Ig_PDGFR_d4
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
130205662
NCBI-ProteinID:
XP_056289137
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Position
15:4770623..4785149
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AA seq
369 aa
AA seq
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MSGDSRSRLRAAFFPPWWSASLLCAASLLTTEWKCARGMRVTSTGPQTIHQAEGGSVSLG
CRYTASPSDSGELDIEWTAVSPDATHEDQTLLSYTSGTIHIHGYLALARGLRFAAPDPST
GDASISIAPLSPAHSATYRCKVRKSPGVDTRKVTLVVMVKPSVPECWVEGAELVGGAVSL
HCKSWRGSAPLEYSWRRESAAPLPAASTQDVVTGELRITNHSQSNAGFYRCEAHNAAGAQ
HCGVSLRAERPPNRAAILVGTAVGSLLFIFVLLVFIGILYWKLSDRHVVTGELRITNHSQ
SNAGFYRCEAHNAAGAQHCRVSLRAERPPNRAAILVGTAVGSLLFIFVLLVFIGILYWKL
SDRRRSEEL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagacagtcgcagccgtttgagagccgccttcttcccgccctggtggtccgcc
tccttgctttgcgctgcaagtctcttgaccacagaatggaaatgtgcacgagggatgcgg
gtgacatccacgggtccacagaccatccatcaggcggagggagggagcgtgagtttgggc
tgcaggtacacggcgagcccttcggacagcggagaactcgacatcgagtggaccgcggtc
agtccggacgccacgcacgaggaccagacgctcttgtcgtacaccagcggaactatacac
atccacggttacctcgcccttgccagagggcttcgctttgccgctcctgacccctcgacg
ggcgacgcgtcgatctcaatcgctccgctgtcgcctgctcatagtgcgacttaccggtgc
aaagtgaggaaatcacctggagtggacacgcgcaaggtgacgctggtggtaatggtgaag
ccgtcggtgcccgagtgctgggtggagggagcggagctggtggggggggcggtgtctctg
cactgcaagtcgtggcgaggctccgcccccttagagtacagctggaggagagagagcgcc
gcccccctccctgctgccagcacgcaggacgtcgtgaccggggagctgaggattaccaat
cactcgcagagcaacgcgggattctaccgctgtgaggcgcacaatgcagccggagcccag
cactgcggggtcagcctgagagcagagaggcccccaaacagagcggcaattctcgtcggc
acggccgtgggttccctgctcttcatcttcgtcctgctcgtcttcatcgggatcctctat
tggaagctgagcgacagacacgtcgtgaccggggagctgaggattaccaatcactcgcag
agcaacgcgggattctaccgctgtgaggcgcacaatgcagccggagcccagcactgccgg
gtcagcctgagagcagagaggcccccaaacagagcggcgattctcgtcggcacggccgtg
ggttccctgctcttcatcttcgtcctgctcgtcttcatcgggatcctctattggaagctg
agcgacagacgtcgctctgaggagctctga
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