KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130205671
Entry
130205671         CDS       T09868                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 44
  KO
K24224  cilia- and flagella-associated protein 44
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pswi03037]
    130205671
Cilium and associated proteins [BR:pswi03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   130205671
SSDB
Motif
Pfam: Beta-prop_EML Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_1st WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 130205671
NCBI-ProteinID: XP_056289146
LinkDB
Position
15:7600669..7637817
AA seq 1805 aa
MLEENTTSVGERAESSPTASHGNGEVEQQEVEEGSKKRRSADMYYKYEELHSRPSITPDS
EIPENLLHLSHSFGYDSGRRGNLQLLDDRTLVFIAGNLLVLLDISTKEQKYIRSCSGGGI
GSITAHPSKEYFAVAEKGTQPNIIVYEYPSLRPFCILRGGTERAYSFVNFNPDGSLLAAV
GSAPDYMLTLWDWRKEEVMLSCKAISQEVYRVSFSPYNPRLLTSSGSGHIKFWQTASTFT
GLKLQGVMGHFGKTAATDIEGYVELPDGKVVSGSEWGNLLLWDGNGIKVEICREKGRNCH
AGTVQPFALGDGQLMTFGSDGVVLLWDFESIDTADSTGDGSRFELEPINEIVVGQNVCLS
SVVRSSLPDICFVQDSTGAIWKLNLSFINMTLPECLFSFHAGAIQGLDVSRKSHLMATTT
LDRSVKVFDFLAKRELTSRHFNQGGTALCWAPPLVNQSGSLLVTGFEDGVVRLLELYDPQ
RLQVVTKRKGDAMLSLKQAFKPHNAHVTAIAYERNGEILATGSCDNTVFFFTVGEKYNPI
GFVHVPGPVQALEWSPHSHTESRLLILCQSGHVVEVHSPDPEAHRPTETFQLTELPSRSF
RFRSIKSRIKREEEIARRQVVKEKKKESEEKLKELKKLNAKPEKEEEEEEEEEELPAIYI
PDPPSPLYCGFYSEPGKFWLSMGGFDSGFLYHCKFSEKQDEDPDQRQDEPFDFLPVHSKD
DDPIRSLTFSFNRQLLLCGMHSGFIRVYPLQPGDSSLTSMQAYWALSVHDNQYGHLRHIC
CSHDDHFVLTAGDDGNIFSFSLLPPDELQKGLQKKRATVPSPRVGLENEAKDIVEQAAYS
IETAKQKLQKDRLRREAGLKIAEKRKKLAELQKKFKQLMNDNQNMPEHVRLKPAELQLDR
RFGEQAERVKAQRVREVRKQMGWEEERCSIGLSKLQDWFKDTLEANMVTVVAIGTDHRVS
TYCLPALAEPSSRLRHLRSPSWLDGHKPAGSERRKSRADPAKDSGIEQEELLRCPQARPA
GIMLTNQQVERLRKAAEKAEQAQAKIEKRKQDWARLYAEKPNKDSEDLQDVQAIREAKEN
IGDLKLKSDKTFTLPKHLRMNAERKRTELIGLEENICEKQVEMNGNIVALRDSKIRLVSK
LHAQAQQVQKVQQRLAAHLHCPPPTMPTLLPEETPEKRLQYSNATLKQYRILREQRLQTI
EPEGATHLLEQLEKEMEGEEGKEAQEGTPSLPASSATREEEETAEEKDTALSELEDELRR
EEEVILLYEQNSLLKQIESSVCQFDAELMLLRHQKLCLDWQLKMADLRQLTLYQELLILK
EFDRREDSLQENLNGRIKEESSITSDLEEFNEELELKQGDIAQLHEKEKTLTAAFQASLG
KENKFEEFLTKVFKKKIKRIKIEDQTGSKGEQKXHKXDCVMLCSEEEDSDEDDDWDDDYD
EGTEDGGAALDDNHCPPGCEPELFEKTLQLRERRLDLEELLVEKKKSAEVLKKECDTLVK
KEKSMKTSRKAAEDDLELINREKQQKMNELDVVVPLRLHQIKFVLNGSVPSDLSPALVLG
MTELDRLQKRIKQLHAEKSQQKDLYCEAHKHQGRLVHDRRVMDANIQVLEKNCKELMMLK
FGRLVNLETLQALSGNRTLEELKQQKFLRELADAKEIKHWDMKVEEAHRALMEVTRCNTE
LLLRMTTLLDQKKELENKLNARQKKMGRQFQDNRRRVDQEEIRRLVGLVKTQSQQAEALR
REIGLLSRQGGHVLPPGRAPLPPLALLPTLRGRTHTRLLSRQGGCILPPGPPPLTPLSAT
PANKD
NT seq 5418 nt   +upstreamnt  +downstreamnt
atgttggaagaaaacacaacttctgttggtgagcgggcggagagctcaccgacagcgtca
catggaaacggtgaagtggagcagcaggaggttgaagagggatcgaagaagcggcgctcg
gcagacatgtactacaagtatgaggaacttcactccagaccgtccatcacacctgactct
gaaatcccagagaacctcctgcacctctctcactcctttggctatgacagtgggcgcagg
gggaacctgcagctcctggacgacaggactctggtctttatagcagggaacctgctcgtc
ctgttggacatttccaccaaggagcagaaatacatccgctcctgcagcggaggaggaatc
ggctccatcacggcacaccctagcaaggagtactttgctgtcgcagagaagggaacgcag
cccaacatcatagtatatgaatatccctcgctacgaccgttctgcatcctcagaggcggt
acggagcgggcgtacagctttgtgaattttaaccctgatgggagcctgctggccgctgtg
ggaagcgcacccgactacatgctgacgctgtgggactggaggaaggaggaagtaatgctg
agctgcaaggccatttctcaggaggtctaccgagtcagcttctccccatataacccgagg
ctgctcacatcatcaggatctggacacatcaagttctggcaaacggccagcacattcaca
ggccttaagttgcaaggagttatgggacattttgggaaaactgcagcgactgatattgag
ggctatgtggaacttcctgatggaaaggtggtgtctggctcagaatggggtaacttgttg
ctgtgggatgggaatggcatcaaggtggagatttgccgtgagaaggggcggaactgccat
gcggggacggtacaacctttcgccctgggagatggacagctgatgacgtttggctctgat
ggagtggtcctgctttgggactttgagagcatcgacactgccgacagtaccggcgacggc
agcaggtttgagcttgagcccataaatgagattgtggttggacagaacgtctgcctctcc
tctgtggtgaggagctccttgcctgacatctgttttgttcaggattccactggagccatc
tggaaactgaatctttcattcatcaatatgactcttccagagtgcctgttttccttccac
gccggggcgatccagggcctggatgtgtcaaggaaatctcacctgatggccacgaccact
ctcgaccgttcagtcaaagtttttgacttcctcgccaaaagagagctgaccagcagacac
ttcaatcagggtggaactgctctctgctgggctccacctttggtgaaccagagcggaagt
ttactggtgacaggcttcgaggatggggttgtacggttactggagctgtacgaccctcaa
aggctgcaagtggtcaccaagcgcaaaggagatgccatgctgagcctcaaacaggccttc
aaaccccataatgcccatgtaactgctattgcatatgagcgaaatggagagatcttagcc
actgggagctgtgacaacactgtgttctttttcaccgtcggggaaaaatacaaccccatc
ggctttgtccacgttcctgggccggtgcaggcgctggagtggtctcctcattctcacact
gaaagcaggctgctcatcctgtgtcagagtggtcatgtggtcgaggttcacagtcctgat
ccggaggcacataggccaaccgaaaccttccagctgactgaattgcccagcagatctttc
aggttcaggagtatcaaatctcgaatcaagagagaggaggaaatcgcaagacgtcaagtc
gtaaaggagaagaagaaagagagtgaggagaagttgaaagaattaaagaagctgaatgca
aaaccagagaaagaagaagaagaagaggaggaagaagaagagttgcctgctatctacatc
cctgaccccccaagtcctctctactgtggcttctactcagagcctggcaaattctggctg
tccatgggtggcttcgactcaggtttcctgtatcactgtaagttctctgagaagcaggac
gaggatccggatcagcggcaggatgagccgttcgacttcctgcctgtccacagcaaagat
gacgaccccattcgctctctcaccttcagcttcaacaggcagctgctgctttgtggcatg
cactcaggcttcatcagggtttaccctctgcagcctggagacagcagcctcacctccatg
caggcctactgggctctcagtgtccacgacaaccagtacggacacttgcggcacatctgc
tgtagccatgacgaccactttgtgctgaccgcaggagatgacggcaacatcttctccttc
agcctccttcccccagatgagctacagaaaggcctgcagaaaaagagggccacggttcct
tcacccagggtgggtcttgagaatgaggccaaagacattgtggaacaagctgcctacagc
atagaaacggccaagcagaagctgcagaaggaccgtctgcgtcgggaggctgggctgaag
attgctgagaagcgcaagaagctggccgagcttcagaagaagtttaaacagctgatgaat
gacaaccagaatatgcctgagcatgttcgcctgaaacctgcggagctgcaactggaccgg
cgtttcggtgagcaggcagagagggttaaggcccagcgggtgagggaggtcagaaagcag
atgggctgggaggaggagcgctgcagcatagggctcagcaaactgcaggactggttcaag
gacactctggaggccaacatggtgactgtggttgccatcggcaccgaccatagagtctcc
acttactgtctgccggcactcgcagagccttcctcccggcttagacatctgaggagtccc
agctggctcgatggacacaaacctgctggatcagaacgcagaaaatcaagagccgatcct
gcaaaagacagcggcatagaacaggaggagctgctgcgctgcccacaagctcgtccagca
ggaataatgctgacaaatcagcaggtcgagaggctcagaaaggctgcagagaaagctgaa
caagctcaagccaagatagagaagaggaagcaagattgggcccgactttacgcagagaag
ccaaacaaggacagtgaggatctacaggatgttcaggccatccgtgaagccaaagagaac
atcggagacttaaaactgaagtcagacaaaacctttacgttgccgaaacacctgaggatg
aatgctgagaggaagagaacagagctgataggcctggaggaaaatatctgtgagaagcag
gttgagatgaatggaaatatcgtggcgttgcgggactccaagattcgtctcgtgtctaag
ttgcatgctcaggctcagcaggtccagaaggtccagcagcgtctggcggcccatcttcac
tgtcctccacctaccatgcccactttactaccagaggaaaccccagagaagaggctgcag
tacagcaacgccaccctgaagcaatataggattctgagggaacagaggttgcagaccatt
gagccggagggagccacacatttactggagcagctggagaaagagatggaaggagaggag
ggaaaagaggcccaggaagggactcccagtctgccagcttcatctgcaaccagagaagaa
gaagagacggcagaggagaaagacacagcactgagcgagctggaagatgagctccggagg
gaggaggaggtcatactgctgtatgagcagaactctctgttgaagcagatagagagttcg
gtgtgtcagtttgatgcagagctcatgctgctgcgtcaccagaagttgtgtctcgactgg
cagctgaagatggccgacctccgtcagctgacgctctaccaggagctgctgatcctgaag
gagttcgacaggagggaggacagtctgcaggagaacctcaacggacgcattaaggaggag
agcagtattacgtctgacctggaggagtttaacgaagagctggaactgaagcagggagac
atagctcagctgcatgagaaagaaaagactctaactgctgccttccaggcttcattgggc
aaagaaaacaagttcgaagagtttctgacaaaagtcttcaagaagaagatcaaacgcatt
aagattgaggatcagacaggaagtaaaggtgagcagaagtaacacaagtgagattgtgtg
atgctgtgcagtgaagaggaggacagtgatgaagacgacgactgggatgatgattatgac
gagggcacagaggacggaggagcagctctggacgacaatcattgcccaccaggctgtgag
ccagagttgtttgagaaaacactgcagttgcgtgagcgtcggctggacctggaggaactg
ctggtggagaagaagaagagtgctgaagtgctaaagaaggagtgcgacacactcgtcaaa
aaggagaaatcgatgaagaccagccggaaggcagccgaggacgacttggagttgatcaac
agggagaagcagcaaaagatgaacgagctggatgtggtggtccctctcagattgcaccag
attaagtttgttttaaacggatcggtgccgtctgacctgagcccggcgctggtgctgggc
atgacggagctcgacaggctgcagaagcgcatcaagcagttgcatgcggagaagagtcag
cagaaagatctgtactgtgaggcacacaagcatcagggcaggcttgttcacgaccgcagg
gtaatggacgccaacatccaggtgctggagaagaattgcaaggagctgatgatgttgaaa
tttgggaggctggtgaatctggagactctccaggcgctgtcggggaacaggacgctggag
gagctcaagcagcagaaattcctcagagaattggcagacgctaaggaaatcaaacactgg
gatatgaaggtagaagaggcacatcgggctctgatggaggtaaccaggtgtaacacagaa
cttctcctccgcatgaccaccctcttggaccagaaaaaggaactggagaataaactcaac
gccaggcagaagaaaatgggcagacagttccaggataacaggagacgtgtggatcaggag
gagattcggaggctcgtggggctggtgaaaacccaatcccagcaggcagaggccctcagg
agagagattggcctcttgtctcgtcaaggaggccacgtcctccccccaggccgggccccg
ctgccaccgctcgcccttttgcccaccctcagaggccgcacccacactcgcctcttgtcc
cgtcaaggaggctgcatccttccgcccggcccgcccccacttacccccttgtccgccaca
ccagcaaacaaggattaa

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