Pseudoliparis swirei (Mariana hadal snailfish): 130205672
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Entry
130205672 CDS
T09868
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205672 (kcmf1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130205672 (kcmf1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130205672 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
TFIIA
Zn_SUZ12
DUF6244
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
130205672
NCBI-ProteinID:
XP_056289147
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Position
15:complement(17505725..17514191)
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AA seq
389 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLYYGGDTFSVEQPQSFTCPYCGKMGYTETSLQEHITSEHAETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGLGGPRARRTNMHFTSGSTGG
LSSSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQLE
RQQAQTARQQVETGRHATRRGNNQGSSGNAIPPPNTATANSAGAGENNPSSSSHSSQFLL
ARLNDPKMSEAERQFLEGERADRSLFVQELLLSTLMHEESSSSDEEERRDFGDFGAMGCV
DIMPLDVALENLQLRERSFMGKEPPPPPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacacgagggtgtgagctgcgatgcgtgtttgaaagggaacttcagaggaaga
cggttcaagtgtttaatttgctacgactacgacctgtgcgcgtcgtgctacgagagcgga
gccaccacgacgaggcacaccacagagcaccccatgcagtgtatattaacccgggtcgac
tacgacttgtattatggaggagacactttttcagtagagcaaccccagtcattcacatgt
ccttactgtggcaagatgggctacacggagacgtccctccaggagcacatcacctcggaa
cacgcagagacttccacagaagtgatctgtccgatatgtgccgccttgccaggaggggat
cccaaccatgtcacagatgactttacagctcacctcacacttgaacacagagcgccaaga
gatttagacgagtccagcagtgtccggcatgtacgcaggatgttccaccctggacgagga
ctgggcggccccagagcgcgacggacaaatatgcactttactagcggctccacgggggga
ctctcctcctcctcatcacagagctccacctacacccccagtaacagagaggccatggac
ccaattgcagagttgttgtctcagctgtcaggcgtgcggcgtgcggcaggcgggcaaatc
aactcctcggggccctcggcctcgcagctccagcagctccagatgcagctgcagctggag
cggcagcaggcgcagacggcgcggcagcaggtggagacgggccgccacgcgacacgccgc
ggcaacaaccagggcagctctggcaacgccatccctccgcccaacacggcaaccgccaac
tctgccggcgcgggtgaaaacaatccctcgtcctcatcccacagctcccagttcttatta
gcacggttgaacgaccccaagatgtccgaagcggagcggcagtttctcgaaggggagcgc
gccgaccgcagcctgtttgtccaggagctgcttttgtccacgctgatgcacgaggagagc
tcctcgtcggacgaggaggagcggcgagacttcggcgacttcggggccatgggctgcgtg
gatatcatgcctttagacgtggcgctggagaacctccagctcagggagcgcagctttatg
gggaaggagcctcctccaccgcctctttga
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