Pseudoliparis swirei (Mariana hadal snailfish): 130205719
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Entry
130205719 CDS
T09868
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130205719 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130205719 (myo5b)
04131 Membrane trafficking [BR:
pswi04131
]
130205719 (myo5b)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130205719 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205719 (myo5b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130205719 (myo5b)
mRNA cycle factors
P-body specific factors
130205719 (myo5b)
Membrane trafficking [BR:
pswi04131
]
Others
Actin-binding proteins
Myosins
130205719 (myo5b)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130205719 (myo5b)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130205719 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF6105
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
130205719
NCBI-ProteinID:
XP_056289192
LinkDB
All DBs
Position
15:21599010..21637977
Genome browser
AA seq
1740 aa
AA seq
DB search
MSVNELFTKFTRVWIPDPEDVWRAAEITRDYKEGEPLLHLKLEDETPLEYPVGPKRNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYEQLHIYG
EEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSTRDSNVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRQYHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCACASSPEFKDLGLTSAEDFIFTSMGENISIEGVD
DAKDLEKTREAFTLLGIKEASQSSLFKVVASILHLGNINISLNRGGDSCHVSKDDLHLQH
FCRLLGLELPQMEHWLCHRKLVTASETYVKSMSGPQAENARGALAKLLYARLFTWIVGHI
NKALLTSAKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
ELIPWTLIDFYDNQPCIDLIEARLGVLDLLDEECKVPKGTDQNWAQKLFKQHSSSAHFQK
PRMSNISFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHDKDDVAP
QKSSRVSVRPAKPAPRGPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKEA
FSFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLLKKSDMTADRKLVCKT
LLETLVKEPDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIKIQKTVRGWLQRVRYRKV
HKMAATLQRYGRGYLARRHADFLRLSRAALVCQKQFRMARDRRAFLRERRAVVTIQAFTR
GMFTRRIYHEFLLHHKALLIQKTVRGWLQRRRFLRARRAAVTVQCSFRQLLARRRLQQMK
VEARSAERLKKLNTGMENKIVQLQRKMDDKSKELRTQNDQLLQVNSGLGSEVNKLQKQLE
QVKSRQVAGGGAGGGAQISSLQEELDRLREELQEASAQRKRMEEDHGNEKMSLQQRVEQL
ETENAELKREKEEMNQRSGEGSTEAQEALQKELDDERQRYQNHLNEFTRLEQRYDNLKEE
LSLSKFQPGHRRNLSNLSSQESDSNYPSVCSSEVGDTEDSIQLVEEMGVEKAAMDIGLFM
KLQKRVRELEQERKRLQLSLEKMEALGKRRDSRSSPSEQEMADQVYNNLKRQELESENKK
LKNNLNELRRSIAERASQSDSPNELQDGYNVLLSQLRSANEELDGRKEEVLILRTQLVSH
AQQQEERELVESSKVPEVNSSNEPVDKEEAFKAYHGLCESKNSRQDWCSLNEDGELGLAY
QGLQQVSRLLEAQLQTQARQHRDELEALHTQIELLRADIEKKQELLNYTAALSPEARVEY
SIQQEITRLTNDNLDLKELVEKLEKNEKKLKKQLRIYMKKVQELEAERSCWFQKNNADFE
MTSFWLANTSRLLHCLKQYSGDEVFMTQNTSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQ
LIRVAEEVIQPMIVSAMLESESIPSLAGYRKRSSSIDFNGGSSYTLEALIRQLGQFHSTM
QDHGLDPEIVGQVARQLFHCINNYTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWLRGNNL
FQSKAAAALNPIIQAAQLLQVKKKTSQDAEAICSLCTALSTQQIVKILNLYTPLNEFEER
VTVAFIRSIQNRPPQSTDPPQLLMDTKHMFPVLFPYTPSALSLETLQIPASLGLDFLIRV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacgagctgttcacgaagttcacgcgggtctggatccccgacccggaggac
gtgtggagggctgcagagatcaccagggactacaaggagggggagccgctgctgcacctg
aagctggaggatgagacgcctctggagtaccccgtgggccccaagaggaaccccctcccc
ttcctgcgtaaccccgacatcctggtgggagagaatgacctcacggccctcagctacctg
cacgagccggcagtgctgcacaacctgaaggtccgattcctggagcccaaccacatctac
acctactgcggcatcgtgctggtggccatcaacccgtacgagcagctgcacatctacggc
gaggaggtgatccgggcctacagcggccagaacatgggcgacatggacccgcacatcttc
gccgtggccgaggaggcctacaagcagatggccagagatgagaggaaccagtccatcatc
gtgagcggcgagtctggcgccggcaagacggtgtcggcgaagtacgccatgcgcttcttc
gccacggtgggcggctccacccgcgacagcaacgtggaggagaaggtgctcgcctccaac
cccatcatggaggccatcggcaacgccaagaccacgcgcaacgacaacagcagccgcttc
gggaagtacatccagatcggcttcagccggcagtaccacatcatcggagccaacatgagg
acctacctgctggagaagtcccgcgtggtgtttcaggctgaggaagagaggaactatcac
atcttctaccagctgtgtgcctgcgccagctcaccagagttcaaagacctcggcctcacc
agtgcagaggatttcatcttcacgtcgatgggggaaaacatctccatcgagggagtggac
gacgctaaagacctggagaagaccagagaggccttcacgctgctgggcatcaaggaggcc
agtcagagcagcctcttcaaggtggtggcctccatccttcacctgggcaacattaacatc
agcctgaaccgaggaggagactcctgtcacgtctcgaaggacgacctccacctgcagcac
ttctgccggctgctggggttggagctgccccagatggagcactggctgtgccacaggaag
ctggtcacggcctcagagacctacgtgaagagcatgtcgggccctcaggcggagaacgcc
cgcggcgcgctggccaagctgctctacgcccgcctgttcacctggatcgtagggcacatc
aacaaggcgctgctcacctccgccaagcagcactccttcatcggggtgctggacatctac
ggcttcgagaccttcgaggtgaacagcttcgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagttcaactcccatgtgtttaagctggagcaggaggagtacatgaag
gagctgatcccctggaccctcatcgacttctatgacaaccagccgtgcatcgacctcatc
gaggctcgcctgggggtcctggacctgctggacgaggagtgtaaagtgcccaaggggacg
gaccagaactgggcccagaagctcttcaagcagcactccagcagcgctcacttccagaag
cctcgcatgtccaacatctccttcatcatcatccacttcgctgacaaggtggagtatcag
tgtgaaggcttcctggagaagaaccgggacacggtgtacgaggagcagatcaacatcctg
aaggccagtcagttccagctggttgcagatctgtttcatgacaaggacgacgtggccccc
cagaagtcctccagagtgagcgtcagaccagcaaagccggctcccaggggccccaacaaa
gagcacaggaagaccgtggggcatcagttccgcagctccctgcacctcctcatggagacc
ctgaacgccacgactcctcactacgtccgctgcatcaagcccaacgacttcaaggaggcc
ttctcgttcgattccaagcgtgcggtgcagcagctccgagcctgtggagttctggagacg
atccggatcagtgcagccgggtacccatccaggtggacgtacccagacttcttcagccgg
taccgagtgttgctgaagaagtccgacatgacggccgacaggaagctggtgtgtaagacg
ctgctggagacgctggtcaaggaacccgacatgttccagttcgggaagacgaagatcttc
ttccgggcggggcaggtggcgtacctggagaagctccgggccgaccggttccgctcggcc
tgcatcaagatccagaagacggtgcgcggctggctgcagagggtccggtaccgcaaggtc
cacaagatggccgccacgctgcagagatacggccggggatacctggcccgcaggcacgct
gacttcctgcgtttgagccgagccgccctcgtctgtcagaagcagttccgcatggcgaga
gacagacgggcgtttctgagagagagacgggcggtggtcaccatccaggccttcaccagg
ggcatgttcacccgccggatctaccacgagttcctcctgcaccacaaggcgctgctgatc
cagaagacggtgcgcggctggctgcagcggcggcgcttcctgcgggcgcggcgcgcggcg
gtgacggtgcagtgctccttcaggcagctgctggcccgacggaggctgcagcagatgaag
gtggaggctcgctcagcggagaggctgaagaagctgaacacggggatggagaacaagatc
gtccagctgcagaggaagatggacgacaagtccaaggagctccggacccagaacgaccag
ctgctgcaggtgaacagcggtttgggctccgaggtcaacaagctgcagaagcagctggag
caggtgaagagtcgccaggtagcagggggaggagccgggggaggagctcagatctcctcc
ctgcaggaggagctggacaggctgagggaggagctacaggaagcgtcggcccagaggaag
aggatggaggaggaccacggcaacgagaagatgagtctccaacagcgggtggagcagctg
gagacggagaacgctgagctgaagagggagaaagaagagatgaaccagaggtctggagag
ggcagcactgaggctcaggaggcgctgcagaaggagctggatgatgagaggcagcgctac
cagaaccacctcaacgagttcaccaggctggagcagaggtacgacaacctgaaggaggag
ctgtctctgagcaagttccaacccggccaccggaggaacctgtccaacctgagcagccag
gagtcggactccaactacccgtccgtctgcagctcggaggtgggagacaccgaggactcc
atccagctggtggaggagatgggcgtggagaaggcagcgatggacatcggtctgttcatg
aagctgcagaagagagtgagagagctggagcaggagaggaagaggctgcagctcagcctg
gagaagatggaggcgctcggcaagcgcagggactccaggagttccccctcggagcaggag
atggctgaccaggtctacaacaacctcaagagacaggagctggagtctgagaacaagaag
ctgaagaacaacctgaacgagttgaggaggtccatcgccgagcgagcgtcccagagcgac
tcgcccaatgagctgcaggacggctacaacgtgctgctcagccagctgcgctcggccaat
gaggagctggacggtcgcaaggaggaggtccttatcctgaggacgcagctcgttagccac
gcccagcagcaggaggagagggagctcgtggaaagcagtaaagttcctgaagtgaacagc
agcaacgagccggtggacaaagaggaggcgttcaaagcctatcacgggctgtgtgagtcc
aaaaattcccggcaggactggtgttctctgaatgaagatggagagctgggtttggcttac
cagggcctccaacaagtgtccaggctgctggaggcccagctgcagacccaggcccggcag
caccgggacgagctggaggccctgcacacgcagatcgagctgctgagggccgacatcgag
aagaagcaggagctcctgaactacacggccgcgctgtccccggaggccagggtggagtac
agcatccagcaggagatcaccaggctcaccaacgacaacctggacctcaaggagctggtg
gagaagctggagaagaatgagaagaaactaaagaagcagctcaggatctacatgaagaaa
gtccaggagttagaggctgagaggtcctgttggttccagaagaataacgcggactttgag
atgacgtccttctggctggccaacaccagccggctgctccactgcctgaagcagtacagc
ggagacgaggtgttcatgacccagaacaccagcaagcagaacgagcactgcctgaagaac
ttcgacctggccgagtaccgacaggtgctgagcgacctttccatccagatctaccagcag
ctcatcagggtggccgaggaagtcatccagcccatgatcgtgtcggccatgttggaaagt
gagagcatccccagcctggcgggatacaggaaacgctcgtccagcatcgacttcaacgga
ggcagcagctacaccctggaggccctgatccgccagctgggtcagttccacagcaccatg
caggaccacggtctggaccccgagatcgtgggtcaggtggcgcgacagctcttccactgc
atcaacaactacaccctcaacaacctgctgctgcggaaagacgtgtgctcctggagcacc
ggcatgcagctcagatacaacaccagtcagatggaggagtggctgcgggggaacaacctg
ttccagagtaaagctgcagccgccctgaaccccatcatccaggccgctcagctgctgcag
gtcaagaagaagacgagccaggacgccgaggccatctgctcgctgtgcaccgccctcagc
acgcagcagatcgtgaagatcctgaacctctacactcctctgaacgagtttgaagagaga
gtcaccgtggccttcatcaggagcatccagaaccgtcctccgcagagcaccgacccgcct
cagctgctgatggacaccaagcacatgttccccgtcctcttcccgtacacgccgtctgct
ctcagcctggagacgctgcagatccccgcctccctcggcctggacttcctcatcagggtc
tga
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integrated database retrieval system
