Pseudoliparis swirei (Mariana hadal snailfish): 130205751
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Entry
130205751 CDS
T09868
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi00514
Other types of O-glycan biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130205751 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130205751 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130205751 (cercam)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130205751 (cercam)
Glycosyltransferases [BR:
pswi01003
]
O-Glycan biosynthesis
O-linked Gal type
130205751 (cercam)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
130205751
NCBI-ProteinID:
XP_056289233
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Position
15:complement(11280238..11289897)
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AA seq
590 aa
AA seq
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MLLRFLSVGALVFLAEGYFSEEMFPEESKMQHPTVVIAILARNSAHSLPYYLGALERLNY
PKDRVSVWAATDHNTDNTTAILKEWLTYMQKFYHDVEWRPMDQPTSYVGESGPKHWPNSR
YEYVMKLKQAALDFARKRWADYILYADTDNILTNPETLNLMMAENKSAVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMIHSTMLLDLRKEGMTKLAFFPPHTDY
SWPYDDIIVFSFSCRAAEVQMYLCNKERYGYLNVPAKPQQTLEDDRLNFVHVHLESMIDG
PPMRPSRYVYMFPKQRDLMGFNEIYLINLRRRTDRRDRMLFSLNELEIDVKVVDAVDGNA
LNSTDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYFIWKETVDLQMNMTLVLEDDIR
FQANFKRRVLRLMEEVKQVELDWDIIYFGRKQVNPGKEEAVEDVHNLVMADYSFWTLSYA
ISLQGAQKLLDAEPLSKMLPVDEFLPIMYDKHPNEDYKSHFPNRNVRAFSTRPLVVQPCH
YAGDPQWVSDTETSTLWDDDAVRTDWRGSHKNLKGAPPSDMLSAAYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttactgcgcttcctctcggtcggggccttggtcttcctcgccgagggctacttttcg
gaggagatgttcccggaggagtcgaagatgcaacatccgacggtggttatcgctatctta
gccagaaacagcgcgcactcgctgccctattacctcggggctctggagagactcaactac
cccaaagaccgcgtctccgtgtgggcggccacggaccacaacacagataacaccaccgcc
atactgaaagagtggctaacctacatgcagaagttctaccacgatgtagagtggagacca
atggaccagcccacgtcctacgtaggagagtcgggtccgaagcattggcccaatagcaga
tatgagtacgtgatgaagctgaagcaggcagcgctcgactttgccaggaaacgctgggcc
gattacatcctgtacgccgacacagacaatatcctcaccaacccggaaaccctcaacctg
atgatggcagagaacaagtcagccgtcgctcccatgctggactctcagggagcgtactcc
aactactggtgcggtatcaccccacagggatattaccggcggacagcagagtacttcccc
acccgccatcgccacagactgggctgctaccccgtgcccatgatccactccaccatgctg
ctggatttaaggaaggaaggcatgacgaaactggccttcttcccgcctcacacggactac
tcgtggccctacgatgacatcatcgtgttctccttctcgtgccgggctgcagaggtacag
atgtatctgtgtaacaaggagcgctacggctacctgaacgtcccggccaagcctcaacaa
accttggaagatgaccgccttaactttgtccacgtccatcttgagtccatgattgatggt
cctccaatgcgcccctcacgatacgtctatatgttccccaaacagagagacctcatgggc
ttcaatgagatatatctgattaatctgcgacggcgtacggaccggagagaccggatgctg
ttctctctgaatgagcttgagattgacgtcaaggtggtagacgccgtggatggaaatgca
ctgaacagcactgacattaagatcctgggtgtggacctgctgccaggctactatgacccg
ttctctggacgcactctcaccaaaggagaggtgggctgcttcctcagccactacttcatc
tggaaggagacggtggacttgcagatgaacatgacgctggtccttgaagacgacattcgt
ttccaggccaacttcaagcgacgagtcctcagactgatggaggaggtgaagcaggtggag
ctggactgggacatcatatactttggcaggaagcaggtgaatcctggaaaggaggaggcg
gtggaggacgttcacaacttggtgatggccgactactcgttttggactctgtcctacgcc
atctccctgcagggagcccagaaactgctcgacgctgagccgctgtccaagatgcttccg
gttgatgaattcctccccatcatgtatgacaaacatcccaatgaggactacaagtcccat
ttccccaacagaaatgtacgcgccttcagtacacgcccccttgtggtccagccgtgtcac
tacgccggcgatccccagtgggtgagcgacacagagacgtcgactctgtgggacgatgac
gctgtccgcaccgattggaggggttcccacaagaacctgaaaggggcgccgccgtccgac
atgctgtcagctgcctacaaggatgaactttag
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