Pseudoliparis swirei (Mariana hadal snailfish): 130205755
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Entry
130205755 CDS
T09868
Symbol
syk
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04625
C-type lectin receptor signaling pathway
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130205755 (syk)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130205755 (syk)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130205755 (syk)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
130205755 (syk)
Protein kinases [BR:
pswi01001
]
Non-receptor tyrosine kinases
SYK family
130205755 (syk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
ABC1
Kdo
Haspin_kinase
RIO1
YrbL-PhoP_reg
Fn3_SaeA_3rd
Motif
Other DBs
NCBI-GeneID:
130205755
NCBI-ProteinID:
XP_056289238
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All DBs
Position
15:1883646..1901665
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AA seq
622 aa
AA seq
DB search
MADAVNTLPFFYGNITREEAEDYLRQANVGNGIYLIRQSRNYLGGFALSVLHSGHCYHYT
IEREPNDTYAIAGGKSHRTPVGVIDYHSQEMDGLVCLLKKPCNRPKNMQPKIGPFEDLKE
KLIREYVTQTWNLMGAALEQAIISQRPKLEKLISTTAHEQMPWFHGSITREDSEPRLLSG
PRTNGKFLIRQRDSGGSYALCLLHERQVMHYRVDRDGSGKLSIPDGKKFDTLWQLVEHYS
YKPDGLLRVLTEPCSRPEGETGLIGRPPLPRDPPGITSALQNAAGGIFSKLRTVPIPGIK
KNRGSRHTSDNLNSYETSVPNNQAASKDAMPMDTQVYESPYADPDELRSSTVERSQLFLE
DGELGSGNFGTVMRGTYKMRKTEKQVAVKILKNEDNNQSVHEEMLREASVMQQLDNPYIV
RMIGICEAENLMLVMELAELGPLHKFLQKNKQTSVRNITELVHQVSIGMRYLEEHHFVHR
DLAARNVLLVTQHYAKISDFGLSKALAEEHSYYKAKGHGKWPVKWYAPECINYLKFSSKS
DVWSFGVLMWEAYSYGQKPYKGLKGNDVMQMIEGGRRMDAPGSCPPEMYELMRTCWTYTA
EDRPAFNVVEPRLREYYYDIAQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctgtgaacacgctgcctttcttctacggcaacatcacccgggaggaggcg
gaggactacctgcgccaggccaacgtgggaaacggcatctacctgatcaggcaaagccgg
aactacctgggcggcttcgcgctgtccgtgttgcattcgggccactgctaccactacacc
atcgagagggagcccaacgacacgtatgccatcgccggggggaagagccacaggaccccc
gtgggcgtgatcgactaccactcgcaggagatggacggcctggtgtgtttgctgaagaag
ccctgcaaccggcccaagaacatgcagcccaagatcgggcccttcgaggacctgaaggag
aaactgatccgggagtatgtgacgcagacgtggaacctgatgggtgccgctctggagcag
gccatcatcagccagaggcctaagctggagaagctcatttccaccacggctcacgaacag
atgccgtggttccacgggtccatcaccagggaggactcggagccccgcctcctgagcggc
ccgcgcaccaacgggaagttcctgatccgtcagagggactccggtgggtcctacgctctg
tgtttacttcatgagcgtcaggtgatgcactaccgggtggaccgggacggctcggggaag
ctctccatcccggacgggaagaagtttgacaccttgtggcagctggtggagcactactcc
tacaagccggacgggctgctgcgggtgctcacggagccgtgttcgaggcccgagggagaa
accgggctgattggccggcccccgctcccacgggacccccccgggatcacgtcggccttg
caaaatgcagcaggtggaattttctccaaactcagaactgttcccattcctggtataaag
aagaaccgaggatctcgacacacctcagataatctcaattcttatgaaaccagcgtgccc
aacaaccaagcagccagcaaagacgccatgccgatggacacgcaggtgtacgagagtccg
tacgccgacccggacgagctgaggagttctacggtggagcgcagccagctgttcctggag
gacggggaactgggctccgggaacttcggtaccgtgatgaggggaacctacaagatgagg
aagaccgagaagcaggtggcagtcaagatcctgaagaacgaggacaacaaccaatcggtg
cacgaggagatgctgcgggaagccagcgtgatgcagcagctggacaacccgtacatcgtg
aggatgatcgggatctgcgaggcggagaacctcatgctggtgatggagctggccgagctg
ggcccgctgcacaagttcctccagaagaacaaacagaccagcgtgaggaacatcacggag
ctggtccaccaggtgtccatcgggatgcgctacctggaggagcaccacttcgtccacagg
gacctggcggcccgcaacgtgctgctggtcacgcagcactacgccaagatcagcgacttc
ggcctctccaaggccctcgcggaggagcacagctactacaaggctaaaggtcatgggaag
tggcccgtgaagtggtacgctcctgagtgcatcaactacctaaagttctcctccaagagc
gacgtgtggagcttcggggttctgatgtgggaggcgtactcctacggccagaaaccatac
aagggcttgaaaggaaacgacgtgatgcagatgattgaaggcgggcggcgcatggacgcc
ccgggcagctgccctccggagatgtacgagctgatgaggacctgctggacgtacacggcg
gaggaccggcctgcattcaacgtggtggagcccagactacgagagtactactacgacatc
gcccagtga
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