Pseudoliparis swirei (Mariana hadal snailfish): 130205790
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Entry
130205790 CDS
T09868
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205790 (rnf34b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130205790 (rnf34b)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130205790 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
PI3K_1B_p101
zf-RING_5
DUF4887
DUF4746
eIF-3c_N
BUD22
Motif
Other DBs
NCBI-GeneID:
130205790
NCBI-ProteinID:
XP_056289295
LinkDB
All DBs
Position
15:12731810..12746111
Genome browser
AA seq
425 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGTVRAQQPGFGTGAGPFRFAPSTGYSTYPPTSSGSAGQ
LCKACGLAFSVFRRKHICCDCKKGFCALCSVLQENLRCCTTCHLLHCTAFQRPRLMQLRV
KELRQYLLLRNISTDTCREKEDLVDLVLCHQSTRESPRPVAQRPVAQRPVAERPVAEDED
EDEDDEEDEEDTHEEEEEEEEDEGGDDTHSLHSLPHSRAASPPSATHSPSDQSALSASQG
DVLSPSDSSGTSSQEQEDTPTASLLNLEPTENVMEVSPATQRRIRASLSDLDNEEAIENL
SVRQLKEILARNFVNYSGCCEKWELLERVHRLYRENEQNRKSMVDVSLTAVVAYPPPPCK
SGVGDGVKAQLAADDNLCRICMDAIIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAV
HVFKS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcatcgtccatgtgggcgtcatgctgcgggctgctgaacgaggtgatg
ggcacgggcacggtgcgggcgcagcagccaggctttggaacaggggcggggcccttccgc
ttcgcccccagcaccgggtactccacctacccccccaccagctcggggagcgccggacag
ctgtgcaaggcttgcggactggccttctctgtcttcaggcgcaagcacatctgctgtgac
tgtaagaagggtttctgcgccctgtgctcggtgctgcaggagaacctgcgctgctgcacg
acctgccacctgctgcactgcacggccttccagaggcctcggctcatgcagctccgagtg
aaagagctgcggcagtacctgctgctgcgcaacatctccaccgacacgtgcagagagaaa
gaggacctggtggacctggtgctgtgtcatcagagcaccagggaatccccgagaccagtg
gcgcagagaccagtggcgcagagaccagtggcggagagaccagtggcggaggatgaggat
gaggacgaggatgatgaggaagacgaagaggacacacatgaggaggaggaggaggaggaa
gaggatgaagggggagacgacacacacagccttcactcgctcccccactcgcgcgccgcc
tcacccccctcagccacgcactccccctccgaccagtcggcgctctccgcctctcaggga
gacgtgctcagcccaagtgacagctcggggaccagcagccaggagcaggaggatactcca
acagcgtctctcttgaacctggagcccacggaaaatgtcatggaggtcagtccggcgaca
cagaggaggatcagggcctcgctgtctgatctggacaacgaagaggcgatagaaaacctc
tccgtccgccagctgaaagagattctcgccaggaactttgtcaattactccggctgctgt
gagaagtgggagctgctggagagggtgcatcgactgtatcgagaaaatgagcagaacagg
aaatccatggtagatgtgagcttaacagcagtggttgcatatcctccacctccctgcaaa
agtggagttggagatggtgtcaaggctcagctggcggctgatgacaacttgtgtcgcatc
tgcatggacgccatcatcgactgcgtgctgctggaatgtggtcacatggtaacctgcacc
aaatgtggaaagaggatgagcgagtgccccatctgcaggcagtacgtcgtgcgggccgtg
cacgtcttcaagtcttaa
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