Pseudoliparis swirei (Mariana hadal snailfish): 130205792
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Entry
130205792 CDS
T09868
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130205792 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205792 (wdr41)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130205792 (wdr41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD_LRWD1
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
130205792
NCBI-ProteinID:
XP_056289301
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All DBs
Position
15:19375002..19383470
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AA seq
448 aa
AA seq
DB search
MLRWMLGGREAQGSVEKSSVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGERLQELRGHSQQITAMTTFTCEDGPTSLITASSDRSLSLWDPDSGHR
VQTISDLQSSVKCLLVLERLCVWVSGGEELCVWNKDFQLQCQRQNQSDTGITALIELPKN
CIAAAVDKEIVIFRLTVSTDSSMSLAEIRRLTDHQDRIRALINVGDRLFASGSHMGELIL
WDAIDWNIVGYEHILWEESQACSQAEIRLAAPKPSEMSIQHLSTNGRHILAAVGSGLYVY
SVQTKTVVAYRKVAHDSNVLHTMLLSDSELMSCSEDGSVRMWEIQDLPLPGEPASPGFFG
MWNFGRSNKQSGLPSKKITDVPPHIRTLELTGDLIGHSGAVQMFSSFGENGLVTCSTDHL
LILWKNGERQSHLRSLALFQKLEENGGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctccggtggatgctcggtggtcgagaggcgcagggttcagtggagaaaagctctgtg
ttgtgcatcggagaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacatcgttcgatttctggtgcagattgatgacttcagatgtgcctcagccggc
gacgacggcctcgttctggtgtggaacgtcgagaccggggagaggctgcaggagctgagg
ggtcattcccagcagataacggccatgaccaccttcacctgtgaggacggacccacgtcg
ctcatcacggcctcgtcagaccgaagtctcagtctgtgggacccggactcaggccaccgg
gttcagaccatttcagatcttcagtcctccgtcaagtgcttgctggtgctggagcgtctg
tgtgtgtgggtctccggcggggaagagctgtgtgtgtggaacaaagactttcagcttcag
tgtcaacgacagaaccagagcgacaccggaataactgcgttgatcgagctgcccaagaac
tgcatcgcagctgctgtggataaagagatagtcatcttcaggctgacggtctcgacggac
tcctccatgtcattggctgagatccgccgcctgaccgaccaccaggacaggattcgagcg
ctcatcaacgtcggcgaccggctcttcgccagcggctcccatatgggcgagttgatcctg
tgggatgcgattgattggaacatcgtgggctacgagcacatcctgtgggaggagtcgcaa
gcctgctctcaggccgaaatacgattggctgcgcccaaacccagcgagatgtcgattcag
catctgagcaccaacggcaggcacatccttgcggctgtgggcagcggcctgtacgtgtac
agcgttcagaccaagacggtggtggcctacaggaaggttgcccacgactccaacgtccta
cacaccatgctgttatccgacagcgagctgatgtcgtgctccgaggacggcagcgtgagg
atgtgggagatccaggacctgcctctacccggcgagccggcctccccagggttctttggc
atgtggaacttcggccggtccaacaagcagagcggacttccttccaagaagatcacggac
gtcccgccgcacatccggacgctggagctgacgggcgatctgattggacactcgggggca
gtgcagatgttctcgagcttcggggagaacggtttggtgacctgctcgacggaccacctg
ctgatcctgtggaagaacggcgagcggcagtcccacctgcgcagcctggcgctcttccag
aagctggaggagaatggaggactgtga
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