Pseudoliparis swirei (Mariana hadal snailfish): 130205802
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Entry
130205802 CDS
T09868
Symbol
si:ch211-243g18.2
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205802 (si:ch211-243g18.2)
04147 Exosome [BR:
pswi04147
]
130205802 (si:ch211-243g18.2)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
130205802 (si:ch211-243g18.2)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130205802 (si:ch211-243g18.2)
Exosomal proteins of other body fluids (saliva and urine)
130205802 (si:ch211-243g18.2)
Exosomal proteins of colorectal cancer cells
130205802 (si:ch211-243g18.2)
Exosomal proteins of melanoma cells
130205802 (si:ch211-243g18.2)
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Baculo_PEP_C
BLOC1_2
Laminin_II
Gp58
ParB
ATG16
HR1
Motif
Other DBs
NCBI-GeneID:
130205802
NCBI-ProteinID:
XP_056289313
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All DBs
Position
15:11869660..11878053
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AA seq
426 aa
AA seq
DB search
MTSGMSMRSFSMSRQPSFSSRSLMDTGRSRSRASVSFTASSSLNRSASINQDLNGPTSLQ
INGLHDNNVNDKEAMKSLNNRLASYLDKVHSLERANADLEDKIKLIMVHRIPKGHDHDSM
MVQAHAVEEELRNRTLENARLMLEIDNAKLAADDFRVKWETELVMSQSVERDCLALKKAK
TDHELIIASLKVDLDTLTEELFFLKKNYDEELEQMRSRIAKDEVTVEVDSAKGPELGTIL
SDLRSQYEGIVKQNREQTEQWYCKKLETVQTTVKENTDALRSVQNELVERQRSLQNLEME
LEGLQKQVGALDSNLTETGHKYASEMELLQLTLNQLEDDLSELRLDMQRTKNDYEQLLRI
KQNLEMEIATYRSLLEGEEEVKEVPPPPKKPDIRTRKIVKVITQTVIDGKVVEESHEEEH
IEEKMK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacctccggcatgtcaatgagaagcttctctatgagtcgccagccctccttttccagt
cgctccctgatggacaccggccgctctcgctcccgcgcttcggtgtctttcactgcaagc
agctctctgaatcgttcggcctccatcaaccaggatctcaacgggccaacaagcctgcaa
attaatggccttcacgacaacaacgtcaacgataaggaagccatgaagagcctgaacaac
cgtctggccagctacctggacaaggtgcattccctggagcgcgccaacgcagacctggag
gacaagatcaagctgattatggtccaccgcattcccaaaggtcatgaccatgattccatg
atggtccaagctcatgccgttgaggaagagttgaggaacaggaccttggaaaatgctcgt
ctcatgttagagatcgacaacgctaaactggctgctgatgacttcagagtcaagtgggag
acagaactggtgatgtctcagtctgtggagcgagactgtcttgctctgaagaaggccaag
accgaccacgagctgatcatagcctccctgaaagtagatctggacaccctgacagaagaa
ctgttcttccttaagaaaaactacgacgaggaactggagcagatgaggtctcgcattgcc
aaagatgaggtgactgtggaggtggactcggccaaagggccagagctgggcaccatcctg
tccgacctgcgttcccagtatgaggggattgtcaagcagaacagggaacaaacagagcag
tggtactgcaagaagctggagacggtgcagactaccgtgaaggagaacaccgatgctctg
agaagtgttcagaatgagctggtcgagaggcagcgctccctgcagaacctggaaatggag
ctggagggtctgcagaaacaggtaggggcactggacagtaacttgactgagacgggccat
aaatacgcctctgagatggagctgctgcagctcaccctgaaccagctggaggacgatctc
tcggagctcaggctggacatgcagcgcaccaagaacgactacgagcagctcctccgcatc
aagcagaacctggagatggagatcgccacttacaggagcctgttggagggagaggaggaa
gtcaaggaagttcctcctccaccaaaaaagccggacattcgcaccaggaagattgtgaag
gtgataactcagacggtgatcgacggcaaggtggtggaagaatcccacgaggaggagcat
atcgaggagaagatgaaataa
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