Pseudoliparis swirei (Mariana hadal snailfish): 130205808
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Entry
130205808 CDS
T09868
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130205808 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130205808 (dcp2)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
130205808 (dcp2)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130205808 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
130205808 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
130205808
NCBI-ProteinID:
XP_056289321
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All DBs
Position
15:1598437..1605413
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AA seq
398 aa
AA seq
DB search
MFSTNMETKRVEIPTGLLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAVFHHCPFLLPHGEDVQKILEQWKEYKMGVPTFGAIMLDEALENALLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKDRISKDRYLEQKITDQLVRLY
IIPGVSKDTKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPL
REWINRLKGESTDSDEDFTTSGSTPGRPSDGTRSKSRRLTGPEAFPGDGSAKHKQQKTLE
QLSPYELHQNPNVKSNGKKCPDSSHGANNQPGKPSLKEDNKRLQPRRLQDSFERDTAPPR
GSSGLQAARGRDLEDLASAKAFLNFKFDRDAVMKCFDY
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaccaacatggaaaccaaacgagtggagatccccaccggcttgctggacgac
ctgtgcagccggttcatcctgcacatccccagtgaggagagggacaacgccatccgggtg
tgcttccagatcgagctggcccactggttctacctggacttctgcatgcagaacacgccg
ggagctccgcactgcggcatcagagacttcgccaaggcggtgttccaccactgtccgttc
ctgctgcctcacggggaagatgtccagaagatcctggagcagtggaaggagtacaagatg
ggcgtccccaccttcggagcaatcatgctggacgaagctctggaaaacgcgctgctggtt
caggggtacctcgccaagtcgggatggggcttcccgaagggcaaagtgaacgaggacgag
gcgcctcacgactgcgccgtgcgggaggtgctggaggagacgggcttcgacatcaaggac
cgcatcagtaaggaccgctacctggagcagaagatcacggaccagctggtgcggctctac
atcatcccgggcgtgtccaaggacaccaagttcaaccccaagacccgcaaggagatccgg
aacatcgagtggttccccattgagaagctgccgtgtcaccggaacgacatgacccccaag
tccaaactgggactggcccccaacaggttcttcatggccatccccttcatcaggccgctc
cgtgagtggatcaaccggctgaaaggagaatccacagacagcgacgaggacttcacgacc
agcggcagcaccccggggcgaccttcagacggcacccggtcgaagtcgcgccgcctcacg
ggccccgaggcgtttccaggagacggctctgccaaacacaagcagcagaagacgctggag
cagctgagcccgtacgagctccaccagaacccaaatgttaaaagcaacgggaagaaatgt
cccgactcgtcccacggagccaacaaccagccggggaaaccctcgttgaaagaagacaat
aaaagacttcaaccccgaagactgcaagacagctttgagagagacacggctcctccgcgc
ggctccagcggcctgcaggcggcgcgcggcagagacctcgaggacctggcgtccgccaag
gccttcctcaacttcaagttcgacagagacgccgtcatgaagtgcttcgactactga
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