Pseudoliparis swirei (Mariana hadal snailfish): 130205826
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Entry
130205826 CDS
T09868
Symbol
lrrc8aa
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Aa
KO
K22038
volume-regulated anion channel
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130205826 (lrrc8aa)
Ion channels [BR:
pswi04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
130205826 (lrrc8aa)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_At5g56370
Sp-CxC
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130205826
NCBI-ProteinID:
XP_056289356
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Position
15:complement(17881552..17893527)
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AA seq
814 aa
AA seq
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MIPITELRYFADTQPAYRILKPWWDVFTDYISVIMLMIAVFGGTLQVTQDKMICLPCKWV
VNKSCETMPVLNVSAADASEPRGIQYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLIHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVESDPKPLGKMNGSLD
KPSCVSEDVEASVPMLQRTKSRIEQGIIDRSDTGVLDKKEGEQAKALFEKVKKFRIHVEE
GDIVYRLYIRQTIIKVIKFILIISYTAYYVRFITFSVVCTVNLQKLTGYSTFYCAHPLAT
LFKILACFYISLVVVYGLICMYTLCWMVSRSLKRYSFESIREESSYSDIPDLKNDFAFML
HMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFMLG
GIPDTVFDLVELEVLKLELIPDVTIPPIIAQLSSLREMWLYHTMVKIDAPALAFLRETLK
SLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAHNNRYVVIDGLRELKRLKVLRLKNNLT
KLPQVVTDVGVHLQKLSVNNEGTKLMVLNSLKKMVNLTELELVRCDLERIPHSIFSLHNL
EEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLTHLERLYLNRNKIEK
IPSQLFFCNKLRFLDLSHNNLTRIHADVGFLQNLQYFAVTANRIETLPSELFKCKKLRTL
NLGNNCLQTLPSRFGELTGLTQLELRGNRLECLPVELGECRLLKRSSLVVEEDLFNTLPP
EVKEQLCRADKEQAVTSWGPDDEPREAGPSCCHT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatcacagagctccggtactttgctgacacgcagccagcgtaccgcatcctg
aagccatggtgggacgttttcaccgactacatctcggtcatcatgctgatgatcgccgtg
ttcggcggcacgctgcaggtcacgcaggacaagatgatctgcctgccgtgcaagtgggtg
gtcaacaagtcctgcgagaccatgcccgtgctcaacgtgagcgccgccgatgcctcggag
cccaggggcatccagtacgacctggaccgccatcagtataactacgtcgatgcggtctgc
tacgagaacaaactgcactggtttgccaaatatttcccctacctggtgctaatccacacc
cttatcttcctggcctgcagcaacttctggttcaagttcccccgcaccagctccaaactg
gagcactttgtctccatcctcctcaagtgcttcgactccccgtggacgaccagggctttg
tccgagacggtggtggagagcgaccccaagccgctgggcaaaatgaacggctccctggat
aagccctcgtgcgtgagcgaggacgtcgaggccagcgtgcccatgctccaacggaccaag
tccaggatcgagcaaggaatcatcgaccgctcggacaccggggtgttggacaagaaggaa
ggggagcaggccaaggctctgtttgagaaggtgaagaagttcaggatccacgtggaggag
ggcgacatcgtgtaccgcctttacatccgccagaccatcatcaaagtcatcaagttcatc
ctgatcatcagctacacggcctactacgtccgcttcatcaccttcagcgtggtgtgcacg
gtgaacctgcagaaactcacgggctacagcaccttctactgcgctcaccccctggccacg
ctcttcaagatcttggcctgtttctacatcagcttggtggtggtgtacggcctcatctgc
atgtacaccctgtgctggatggtcagccgctccctcaagcgctactcctttgaatccatc
cgcgaggagagcagctacagcgacatccccgacttgaagaacgactttgccttcatgctg
cacatgatcgaccagtacgacccgctctactccaagcgcttcgccgtgttcctgtcggag
gtgagcgagaacaagctgcggcagctgaacctgaacaacgagtggacgctggagaagctg
aggcagcgcatcaccaagaactcccaggagaagctggagctgcacctcttcatgctcggc
ggcatcccggacaccgtgttcgacctggtcgagctggaggtgctcaagctggagctcatc
cccgacgtcaccattccgccgatcatcgcccagctctccagcctgagggagatgtggctc
tatcacacgatggtgaagatcgatgcgccggctctcgccttcctgcgggagaccctgaag
tcccttcacatcaagttcaccgacatcaaggagatcccgctgtggatctacagcctgaag
aacctcagcgagctgcacctcaccgggaacctgagcgcgcacaacaaccgctacgtcgtc
atcgacgggctccgggagctcaagaggctcaaagtgctgcggctgaagaacaacctgacc
aagctgccgcaggtggtgacggacgtgggcgtgcacctccagaagctctccgtcaacaac
gagggcaccaagctgatggtgctcaacagcttgaagaagatggtcaacctgacggagctg
gagctcgtccgctgcgacctggagcgcatcccgcactccatcttcagcctgcacaacctg
gaggagatcgacctgaaggacaacaacctgaagaccatcgaggagatcatcagcttccag
cacctgcaccggctggtgtgcctgaagctgtggtacaaccagatcgcctacatccccatt
cagatcggaacgctgacccacctggagaggctgtatctgaaccggaacaagatcgagaag
atccccagtcagctgttcttctgcaacaagctgcgcttcctggacctgagtcacaacaac
ctgacccgcatccacgcggacgtgggcttcctccagaacctgcagtacttcgctgtgacg
gcaaaccggatcgagactttgccctcggagctcttcaagtgcaagaagctgcgcactctg
aatctggggaacaactgcctgcagacgctgccgtcgcgcttcggggaactcaccgggctg
acccagctggagctgagaggcaaccgcctggagtgtctcccggtggagctcggcgagtgc
cggctgttgaagaggagcagtctggtggtggaggaggacctgttcaacacgctgccgcca
gaggtcaaggagcagctctgcagggccgataaggagcaagcagtgaccagctgggggcca
gacgatgaacccagagaggccggtccttcctgttgccacacgtag
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