Pseudoliparis swirei (Mariana hadal snailfish): 130205896
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Entry
130205896 CDS
T09868
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130205896 (erbin)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Menin
Motif
Other DBs
NCBI-GeneID:
130205896
NCBI-ProteinID:
XP_056289394
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All DBs
Position
16:209717..276404
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AA seq
1286 aa
AA seq
DB search
MSKRSLFVRLVPCRCLRGEEEAVTSLDYSHCSLEAVPKEVFGFEKTLTELYLDANQIEEL
PKQLFNCQLLQRLSLPDNDLTVLPAAIANLLHLRELDVSKNSIQEFPENIKNCKVLTVVE
ASVNPISRLPDGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMH
KLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGSLKQLSYLDVSKNS
LEMVDEQICGCENLQDLLLSNNALTQLPGSIGSLKRLSALKVDENQLMYLPDSVGGLSAL
DELDCSFNEIEALPSSIGQCGAIRTFAADHNFLSVLPPEMGNWKNATVLFLHSNKLEGLP
EEMGDMHKLKVVNLSNNKLRNLPYSFTRLHQLTAMWLSENQSKPLIPLQKEEDPETHKTV
LTNYMFPQQTRTEDYVPSSDSESFNPALWEEQRKQRAQVAFECDEDQDERETPPREGNLK
RYPTPYPGELKSMVKTAQCVAHRLREDESGGEAARNPIGVQAVGVKVIEAPDPDGSASDA
ESQISTNTSGQNQNPSATEPKDTSDSSGARKAPSGPPGGADHEDTLDSDELSDEEEEMKM
AEMRPPLIQISINAPKVVTLSKEAKDDADSLLDDTVANSNQNNSNCSSPSRMSDSVSLTT
DSSQDDSLGTRPFLPESRLEDQNMNRAPASGPPLHNGNGSESSLQALLKSPPDKMADYDL
SLAFMEKRLDNGVESYGEWDQINMNVSGPPADNTAGSGDPVTPDGDDNVDESLLNGNRRA
ANGDTSLSRSSEELSPGRRGRPGAPAHSGGHTEAPADSGGHTGGAGLKLYSFDGDGEDSY
DAAGGGARGQSVIVRSKSASQLGAPPAPRAPPGSSASSLNLLCSAQPPPGRLPPPQYNVQ
YSSSGVPREALWRTAVPPEGCLAPPPHSLANTNYSNRNQAPPYALQQRPPPPPVDMWTRE
RPPPRSATLQRQSSSASTASVDSAADPRRGDYLTYRDIHTLARGPLAMSHAMQRPLSART
YSVDVPGAPPRSLGPSGPRPRELPERTVSVSDFHHQQGGGPAARPGARSEHSLLDGPGVV
PPDWRDQVMRHIEAKKMEKSAPFRSCNAMGGPPPGGSLYGSHGSLGGRDGAPHAGFSDDV
FPQGQQSYSVEHHRQGPLLMARHASREQLIDYLMLKVSHGPPGAPRAPQDALQQEIHVKM
EKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEGPASMILQPGDKILQANGYNFVNI
DHLHAVSLLKTFPNTVDMLIVREASA
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgcagcctgtttgtgcgcctggtgccgtgccgctgcctgcgcggcgaggag
gaggcggtgacgtcgctcgactactcccactgcagcctggaggcggtgcccaaggaggtg
ttcggcttcgagaagacgctgacggagctctacctggacgccaaccagatcgaggagctg
cccaagcaactgtttaactgtcagttgctccagcgcctgagcctccccgataacgacctg
acggtgctgccggcggccatcgccaacctcctccacctccgggagctcgacgtcagcaag
aacagtattcaggagttcccggaaaacatcaagaactgcaaagtcctgacggtcgtggag
gcgagcgtcaaccccatctccaggctccccgatggcttcacgcagctcctcagcctcacg
cagctctacctgaatgacgccttcctggagttcctcccggcgagcttcggcaggttgact
aagctacagatcctggagctgagggagaaccagctgaagatgttgcccaagagcatgcac
aagctcacccagctggagaggctggacctggggagcaacgagttcactgaagtgcctgag
gttctggagcagctgactgggatcaaggagttgtggatggacggcaacagactgacgttt
ctacctgggatgctgggctcgctgaagcagctgtcctacctggacgtgtccaagaacagc
ctggagatggtggacgagcagatctgcggctgcgagaacctccaggacctcctgctgtcc
aacaacgcgctcacacagctgcccggctccatcggttctctgaagcggctgtcggccctg
aaggtggatgagaaccagctgatgtacctgcccgactccgtgggggggctgagcgctctg
gacgagctggactgcagcttcaatgagatcgaggcgctgccctcgtccatcggtcagtgc
ggcgccatccggaccttcgcggcggatcacaacttcctcagcgtgctgccccccgagatg
ggcaactggaagaacgccacggtgctgttcctccactccaacaagctggagggtctgccc
gaggagatgggcgacatgcacaagctcaaggtcgtcaacctcagcaacaacaagttgagg
aacctcccctacagcttcacccggctccaccagctgacggccatgtggctgtcggagaac
cagtcgaagcccctcatccctctgcagaaggaggaggacccggagacccacaagaccgtg
ctgaccaactacatgttcccccagcagaccaggaccgaggactacgttcccagctccgac
tcggaaagcttcaacccggctctgtgggaggagcagcgcaagcagcgcgcccaggtggcc
ttcgagtgcgacgaggaccaggacgagagggagacccccccgagggaggggaacctgaag
cgctaccccacgccgtaccctggcgagctgaagagcatggtgaagacggcccagtgcgtg
gcccaccggctgagggaggacgagtcgggcggcgaggcggcgaggaaccccatcggggtc
caggccgtgggggtcaaggtgatcgaggcgccggaccccgacggctcggcatcggacgcc
gagtcccagatctccaccaacacgtcgggccagaaccagaacccgtccgccacggagccc
aaggacacgtcggactcctccggcgcccgcaaggccccgtccggaccaccggggggcgcc
gaccacgaggacacgctggactctgacgagctgtccgatgaagaggaggagatgaagatg
gcggagatgaggccaccgctcatccagatctccatcaacgcgcccaaagtggtgacgctg
agcaaggaggccaaagacgacgctgactccctattggacgacaccgttgccaacagcaac
cagaacaacagcaactgctcgtccccgtcgcgcatgtccgactccgtgtctctgaccacg
gacagcagccaggacgactcgctgggcacgaggcccttcctccccgagagccggctcgag
gaccagaacatgaaccgggccccggcctccggccccccgctccacaacgggaacggctcg
gagtcgtcgctccaggcgctcctgaagagccccccggacaagatggccgactacgacctg
tcgctggcgttcatggagaagaggctggacaacggcgtggagtcgtacggcgagtgggac
cagatcaacatgaacgtgtccgggccgcccgccgacaacacggccgggagcggtgacccc
gtgaccccggacggggacgacaacgtggacgagagcctcctgaacgggaaccggcgggcg
gccaacggcgacacgtctctgtcgcgcagcagcgaggagctgtcgccgggcaggaggggc
cggccgggggccccggctcacagcggcggccacacggaggccccggctgacagcggcggc
cacacggggggggcgggcctcaagctgtactccttcgacggcgacggcgaggactcttac
gacgcggcgggcggcggcgctcggggccagagcgtcatcgtgcggagcaagtcggccagc
cagctgggggccccccccgcgccgcgggccccccccggctcctcggcgtcctccctgaac
ctgctgtgctccgctcagcccccccccggccggctcccccccccgcagtacaacgtgcag
tactccagcagcggcgttcccagagaggcgctctggaggacggccgtgcccccggagggc
tgcctggccccgcccccccactcgctcgccaacaccaactactccaaccgcaatcaggcg
cccccgtacgccctccagcagaggccgcctcccccccccgtggacatgtggactagggag
cgcccccccccgcggagcgccaccctgcagcggcagagcagctccgcttccacagcctcc
gtcgactccgcggccgacccgcggcgcggcgactacctgacgtaccgggacatccacacg
ctcgccaggggcccgctggccatgagccacgccatgcagcggcccctgtcggcgcgcacc
tacagcgtggacgtgccgggggcccccccccggagcctgggcccctccgggccgcggccc
cgcgagctcccggagaggaccgtgtccgtcagcgacttccaccaccagcagggcggcggc
ccggccgcgaggcccggcgcccggtccgagcactcgctgctggacgggccgggggtggtg
ccgcccgactggagggaccaggtgatgcggcacatcgaggccaagaaaatggaaaagagc
gcgccgtttcgctcctgtaacgccatgggcgggcccccgccgggcggctcgctctacggc
agccacggctcgctgggcggtcgggacggagcgccccacgctggcttcagtgatgacgtg
tttccacaaggacagcagagctacagcgtggagcaccacagacaggggcctctgctgatg
gcccgccacgcctccagggagcagctcatcgactacctgatgctcaaggtctcccacggg
cccccgggggccccgcgagccccgcaggacgcgctgcagcaagagatccatgtgaaaatg
gagaagaatcccgagctgggtttcagtatctcaggaggagtgggcggccgggggaatccg
ttccgaccagacgacaacggtatatttgtgacgagggttcaacctgagggaccggcgtcc
atgatccttcagcctggagacaaaatcctacaggcgaacggctataactttgtgaacatc
gaccacctgcacgccgtgtccctcctgaagacgttccccaacacggtggacatgctgatc
gtaagagaagcgtcggcgtag
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