Pseudoliparis swirei (Mariana hadal snailfish): 130205898
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Entry
130205898 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04217
Necroptosis
pswi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130205898
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130205898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205898
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130205898
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130205898
Multi subunit type E3
LUBAC complex
130205898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
ANCHR-like_BBOX
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
130205898
NCBI-ProteinID:
XP_056289399
LinkDB
All DBs
Position
16:2088223..2107554
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AA seq
1104 aa
AA seq
DB search
MSSPESVQMEEVRRRSQSLLSSSGSAQDVKAEVQTMAALPLPLSEKYRHLGVEAMLAENT
TCRNTQEVLESLSRLVKALSILEKYGCNLTSPARPRYWRSVKHNNPVFRTTVDAIKGGRT
VLFLYGYTSQQSDGLSFPDDVTQPDAGLVAAVTLEVMTLRTEVDMLLKGSHPHPENFRDI
IPFILQQVPVVPLVVQDKPAAAVEEEEEEEEEEPADRPAPDPGGQPLKPATGELRRAPVI
SVRADRKLTPPPPAGGCSLCGAASSLVCSSCDGRTFCDACDDLFHRLPARANHRRAAPPV
GVCTICSCSHALCDPCDALFHAHPDHRGHRRGATTSSPSLSPWACSRCTTVNEMRAVLCA
TCERPRLAAAAPEVAAPVPTSPSAEWRCKSCTVANAGSSILCEVCERPRLATRPPAAALA
PPGPGAPAEPGAQWMCQYCTYVNSSATGLCEMCNLSSRDSAGASLPRSLQQTKDQPPPEG
PRPPPEGSRGHLEGPQLGPGGHLEAKRQKTMREDGLHLVQQIREAERRGVSAEEVYAAIC
MCGGSNTDPCDWLTSELPHLLDEICAMAASVQVERDGEEAEPRGVKLSRAEAKTAWLAAR
GDTERAVRQMLRDRQVKMKELRSLGFREAPRCEEALRLSGGEVKGALSLLQRPLLEPFHQ
RIWADQPEPPIDPKHPDKQRTCRRLLALYDLPSWGRCELVLALLQEPDVTSSLEDVVQAV
KESQDKDFIRRLLINECPCCLSNFPRSKMQSLTSCQCSVCHECFGQHFTVAVRDRHIRDM
VCPVCGEPDINESEQLDSYFSTLDIQLRNCLEADVYELFHKKLTEHALMKDPKFLWCCHC
TSGFINDGDQLKVTCPSCFRSFCARCKKPWEAQHQDLSCEQFQQWKRDNDPDHQRQGLAG
FLRDNGITCPSCRFQYALTKGGCMHFSCLQCRYQFCSGCNNPYHKTVCKAAQCSYTGLHA
HHPRDCLFYLRDWEPARLQALLQRSGVDFNTDPSDAAQGALCYVMEQKDEDGQQIDSPCG
HRAETGRAGLCEKHYKEYLVSLVNAHSLDPAPLYEAGELTRACERYLVDTQRAAGGEEDD
DLYHARLLKKLTEVPLGETVPRNK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccctgagtctgtccagatggaggaggtgaggaggaggtcccagtctctcctc
tcctcctcgggttcagcccaggatgtgaaggcggaggtccagaccatggccgccctcccc
ctgcctctgtcggagaagtaccgccacctgggggtggaggccatgttggcggagaacacc
acctgccgcaacactcaggaggtcctggagtctctgagtcggctggtcaaggccttgagc
atcctggagaagtacggctgtaacctgacgagtccggcccggccccggtactggaggagc
gtcaagcacaacaacccggtcttcagaaccacggtggacgccatcaagggcggccgcacc
gtcctgttcctgtacggttacaccagccagcagagcgacggtctcagtttccccgacgac
gtcacccaaccagacgccggcctggttgccgcggtgacgctggaggtcatgaccttacgc
accgaggtggacatgctgctgaagggctcacatcctcaccccgagaacttccgggacatc
atccccttcatcctgcagcaggttccggtcgtgccgcttgttgtccaggacaagccggcc
gccgcggtggaggaggaggaggaggaggaggaggaggagccggctgaccgaccggcgccg
gaccccggaggacagcctctgaaaccagcaacaggtgagctgcgacgcgccccagtgata
agcgttcgtgccgacaggaagttgacgcccccccccccagcgggcggctgcagcctgtgc
ggcgccgcctcctccctggtttgctcgtcatgtgacggacggacgttctgcgacgcctgc
gacgacctcttccaccgcctgcccgccagagccaatcacaggagggccgcgccgccggtg
ggggtctgcaccatctgctcctgcagccacgcactgtgtgacccctgtgacgcgctgttc
cacgcacaccccgaccaccgggggcaccgcaggggggccacgacctccagcccgtccttg
tctccgtgggcgtgctctcgctgcaccacggtgaacgagatgcgcgccgtcctctgtgcg
acctgcgagcgacctcggctcgcggccgccgccccagaggtcgcggcgcccgtccccacg
tcgcccagcgcggagtggcgctgtaagagctgcacggtggccaacgccggcagcagcatc
ctgtgcgaggtgtgtgagcgcccccgtctggccacgcggccgcccgccgccgccctggcg
ccgcccggcccgggagccccggctgagcccggagcccagtggatgtgccagtactgcacc
tacgtgaactccagtgccaccgggctttgtgagatgtgcaacttgtcgtccagagactcc
gccggagcttctctgcctcgctcactccagcagaccaaagaccagcccccccccgagggg
ccccgacccccccctgagggatcccgaggccacctagagggaccccaactgggaccaggg
ggccacctggaggcaaaacgccagaagacgatgagggaggacggcctccacctcgtccag
cagatcagagaagccgagcgccgcggcgtcagcgccgaggaggtgtacgccgccatctgc
atgtgcggcggcagcaacaccgacccctgtgattggctgacgtcggagctgccgcacctg
ctggacgagatctgcgccatggcggcctccgtccaggtggagagggacggcgaggaggcg
gagccaagaggcgtgaagctgtccagagccgaggccaagacggcctggctggcggcgagg
ggagacacggagagagccgtgagacagatgctgagagacagacaggtcaagatgaaggag
ctccgctctctgggcttcagggaggccccccgctgtgaggaggccctccggctgagcggg
ggggaagtgaagggcgcattgtctctgctgcagcgccccctgctggagccgttccaccag
cgtatctgggctgaccagcccgagccgccgattgaccccaagcacccggacaagcagagg
acgtgccgccgcctgctggcgctgtacgacctgcccagctgggggcgctgtgagctggtg
ctggcgctgctgcaggagccggacgtcacctcctcgctggaggacgtggtgcaggccgtg
aaggagtcccaggacaaggacttcatccggcgcctcctcatcaacgagtgcccctgctgc
ctcagcaacttcccccgcagcaagatgcagtccctgacctcctgccagtgctccgtgtgc
cacgagtgcttcgggcagcacttcacggtcgccgtgcgcgaccgccacatccgggacatg
gtgtgccccgtgtgcggcgagccggacatcaacgagtcggagcagctggacagctacttc
tccacgctggacatccagctgcgtaactgcctggaggccgacgtctacgagctgttccac
aagaagctgacggagcacgcgctcatgaaggaccccaagttcctctggtgctgccactgc
acctcaggcttcatcaacgatggcgaccagctgaaggtcacgtgtccgtcgtgtttcagg
agtttctgcgctcgctgcaagaagccttgggaggcccagcaccaggacctgtcctgtgag
cagttccagcagtggaagcgagacaacgacccggatcaccagagacaaggactggccggc
ttcctgagggacaacggcatcacctgcccttcctgcaggttccagtacgctctcactaaa
ggaggctgtatgcacttcagctgcttacagtgccgctaccagttctgcagcggctgcaac
aacccctaccacaagacggtctgtaaggcggctcagtgcagctacaccgggctccacgct
caccacccacgggactgtctgttctacctgagggactgggagccggcccggctgcaggcg
ctgctgcagaggagcggcgtggacttcaacacggacccttcagacgcagcgcagggcgcc
ttgtgctacgtgatggagcagaaggacgaggacgggcagcagatcgattccccgtgcggc
caccgcgccgagacgggccgcgccgggctctgcgagaagcactacaaggagtacctggtg
agcctggtcaacgcccactctctagaccccgcccccctctacgaggccggagagctgact
cgcgcctgtgagcgctacctggtggacacgcagagagcggcgggcggcgaggaggacgac
gacctctaccacgctcgactgctcaagaaactgacggaggttcctctcggagaaacggtt
cctcggaataaatag
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integrated database retrieval system
