Pseudoliparis swirei (Mariana hadal snailfish): 130205922
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Entry
130205922 CDS
T09868
Symbol
cdk13
Name
(RefSeq) cyclin-dependent kinase 13
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130205922 (cdk13)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
130205922 (cdk13)
2.7.11.23 [RNA-polymerase]-subunit kinase
130205922 (cdk13)
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: CMGC group
CDK family
130205922 (cdk13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
130205922
NCBI-ProteinID:
XP_056289466
LinkDB
All DBs
Position
16:complement(6039714..6048767)
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AA seq
1404 aa
AA seq
DB search
MPNSELLREGRGRSPSAQRNANRQDRRSKPGSGGAAAAIAQRDRHREKSRSSASGRKKRR
PTKGRDAWPAGAKGDPGGDRKGTFDKDAELRTLVEYDDVSSQSERFSGSPSPKLDRLSDG
DLGDYNGPASPEKSHPRGREAACVGKDARAPSERSKPEKEPSRKKERQSRERDASKVRGG
GGGSIGVSKNPRDTARSNDRNGKRTSAAPSAQSSQSAEKKDSKGPKSKPRSEKETPSAYR
EAPQSYRDEREDLRPHKKSPGFKAESPYGTSHPYNYQSPAGYNQQISRRSPTYGSKRLSP
SSKYYSRDGDGYGAYGVSKSPTSYSSNKRKRSPTSPAKWRRSPSYGRHSPFEQGEFGASP
YGTRRRSRSPYRKSHSPDVRRSARSRSRSPYSSTRHSRSRSHHRHSRSRSRPSSLSPSTL
TFKTSLAAELSKQKKVKAAAAAKAKNSSDASTPTAGSLSAPQPSPKSNHAPRKGRPPSPP
PPEKGPRTPTQSLPPSPPDGSAKRTAEQPAGRDVKGKDDSVNRDKRKAAAGGQSKDKERA
TGPPTSALSSLPLTLAVLEHVTKGESLKDSLLSVKKKSEKKAHQLLSDLPLPPELPGGTS
SPRSPPDDKKSPTLQRRPKICGPRHGEIKQTEIDWGKRCVDKFDILGITGEGTYGQVYKA
KDKDTAEMVALKKVRLDNEKEGFPITAIREIKILRQLNHKSIINMKEIVTDKEDALDFKN
DKGAFYLVFEYMDHDLMGLLESGLVHFNESHIKSFMRQLLEGLDYCHKKNFLHRDIKCSN
ILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSSGC
ILGELFTKKPIFQANQELAQLELISRICGSPCPAVWSDVIKLPFFNTMKPKKHYRRRLRE
EFAFIPPSALDLFDNMLNLDPNKRCTAEQALCSEFLKGVDPDKMAPPDLPLWQDCHELWS
KKRRRQKQMPEEAAAPKAPRKELGPDDSRNNTPQGLPAPGGAKAQNTSASAPPDKKAPTS
QLTQEQLAVLLNFLGQPKSSINAAQFVQGSKVNQETLQQLSKALAPPNPAEPPPPSAPAK
PPQPAAPAGVPRTPPMPKPPSPPVSATSGVQDGESSAAAAATQTAVTMLLAQLLQARQAP
RQEASGGGAEGAHPAGAAAPGGQPRPAEVKKPTEPIPVSPAGEAGGVSILPPSQRPPEPP
EPPPHADLDYRQPPPEPKTGHAAPIASADGGDGGRPPEPGYPPLPTAEGPGYGGDYIHPP
PPPFTPAGFGDAYMGHMLDGGLPPHALRDVFGGRRSAAGSSSAAGVLAPDPFPRGHGVAR
PDSMVFTGDQDHRFTYNHSPLPAEGQPNPGAIHLYNHAMARTDGGPPLGQPWGSPSQAGA
PPLPLGFVPHVNSAATIRGRGLPF
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattcagagctgctgcgtgagggtcggggtcggagcccctcggctcagagaaat
gctaacaggcaggacaggcggagtaaaccggggagcggtggagctgccgccgccatcgct
cagcgagacagacaccgagaaaagagtcggtcgtcggcttctgggaggaagaaacgcagg
ccgaccaaggggagagacgcgtggcccgcgggggcgaaaggagaccccggcggtgaccga
aagggcacgtttgacaaagacgccgaacttcggacattggtcgagtacgacgacgtgagc
tcccagtcggagcggttctctggcagcccctctccgaagctggaccgactcagcgacggg
gacctcggcgactacaacggaccggcgtccccggagaagagccacccgagaggccgggag
gcggcgtgcgtcggcaaagacgcgcgagcaccgtccgagaggagcaagccggagaaggag
ccgagcaggaagaaggagcgccagagccgcgagagagacgcctcgaaagttcggggtgga
ggtggaggtagcattggggtctctaaaaatcccagagacactgcaaggagcaatgaccga
aatggcaaaaggacatctgcggccccctcagcccagtcctcgcagtctgcagagaagaag
gattcaaaagggccgaaaagtaaaccgcgatctgagaaagagacgccgtctgcatacaga
gaggcgccacaatcgtacagagacgagcgagaagacctcaggccacacaagaaaagtccc
ggtttcaaagcggagagtccctatgggacgtcccatccgtacaactaccagtctcctgct
ggttataaccagcaaatatcgagaagaagcccaacctatgggagcaaaagactctctccc
agttccaagtattacagccgggatggagatggctacggggcgtacggcgtgtccaagtca
cccacgtcgtactccagcaacaaaaggaagcggtccccaacgagcccggcgaagtggcgg
cggtctccgagttacgggcgccacagtccgtttgagcaaggagagttcggcgcaagtccg
tatggaacccgcaggagatcacgaagtccgtacagaaagtcccatagtccagatgtgagg
cgctctgctcgatcgcggagcaggagtccgtattcatccacgagacattcgcgctctcgt
agccaccaccgccactcccgctcccgcagtcgcccctccagcctctcgccgagcacgctc
accttcaaaaccagcctcgccgctgaactcagtaagcagaaaaaggtcaaagctgcagcg
gcggccaaggccaagaactccagcgacgcgtctactccgaccgcgggttccttgtcggcg
cctcagcccagccccaagtccaaccacgcgcccagaaagggccgccctccctctccgccg
ccgccagagaaaggtcccagaacccccacgcagagcctgcccccgtcgccccccgacggg
tcggccaagaggaccgccgagcagccggccggaagagacgtcaaggggaaggatgactcc
gtaaatcgggacaaaaggaaagcggcagccggcggtcagagtaaagacaaggagcgagcc
acgggtccacccacctccgctctgtcgtccctaccgctgaccctcgcggttctggagcac
gtgactaaaggagaaagcttgaaggacagcttgctctccgtgaagaaaaagtcggagaaa
aaggcccatcagctgctttccgacttgcctctcccccccgaactccccggtggcacgtct
tcgccgcgcagcccgcccgacgacaaaaagtccccaactcttcaacgaagaccaaaaatc
tgcgggccaagacacggcgagattaagcaaaccgagatcgactggggcaaacgctgcgtg
gataaattcgatatacttggaatcacgggggaaggcacctacggccaggtgtacaaagct
aaagacaaagacaccgctgaaatggtggctctgaagaaagttcgtctggacaacgaaaag
gagggcttcccgatcaccgccatccgagagattaagattttgcggcagctcaaccacaag
agcatcataaacatgaaggagatcgtcacggacaaggaggatgctctggatttcaagaat
gacaaaggcgctttctatcttgtgttcgaatacatggaccacgacctgatgggcctgctg
gagtccggcctcgtccatttcaacgagagccacatcaagtccttcatgcgacagttgctg
gagggcctcgactactgccacaagaagaacttcctgcacagagacatcaagtgctccaat
attttgctcaataacaaaggtcaaataaagctggccgactttggtctcgctcgactctat
aactctgaagagagtcgtccatacaccaataaagtgattacactatggtaccgcccccct
gagctacttttgggagaagagagatacacgccggctatagacgtgtggagcagcggatgc
atccttggggaactgttcacaaagaaacccatctttcaagccaatcaggagcttgcccag
ttggagctcatcagccgaatatgcggcagcccctgtcctgccgtctggtcggacgtcatc
aaacttccattcttcaacaccatgaaaccaaagaagcattacaggaggcggctacgggag
gagtttgctttcatccccccgtctgccctggacctgtttgacaacatgttgaacttggac
cccaacaaacgctgcacggccgaacaagcgctgtgcagcgagttcctgaagggcgtggac
ccggacaagatggccccgccagatcttccactgtggcaggactgtcacgagctgtggagt
aagaaacgccggcggcagaagcagatgccggaggaagcggcggcccccaaggcgccccgc
aaagagctgggccccgacgacagccgcaacaacacccctcagggcctcccggcccccggc
ggcgccaaagctcagaacacgtctgcttctgcgccgccggacaaaaaggccccgacctcc
cagttgacccaggagcagctggcggtgctcctgaacttcctgggccagcccaagagctcc
atcaacgcggcccagttcgtccagggctcgaaggtcaatcaggaaacgttacagcagctc
tccaaagccctggcgccccccaaccctgctgagcccccccctccgtcggcgccggcgaag
cctccccagcccgccgcccccgcgggcgtgccccgcacccccccgatgcccaagcctccc
tcgccccccgtgtccgcgacgtcgggcgttcaggacggcgagtcgtccgccgccgccgcc
gccacgcagacggccgtgacgatgctgctggcccagctcctccaggctcggcaggcgccg
aggcaggaggcgagcgggggcggggcggagggcgcccaccccgctggagccgcggcgccc
ggggggcagccgcggccggcagaggtcaaaaagccaacagagcccatccccgtttctcca
gcgggtgaagcgggcggtgtttccatcctgccccccagccagaggcccccagagcccccc
gagccgcctccgcacgccgacctggactaccggcagcctccgccggaaccgaagacgggc
cacgcggcgcccatcgcttctgcagacggaggcgacggcgggagaccgccggagcccggc
tacccgcctctccccaccgccgagggccccgggtacggcggggactacatccacccgcct
cctccgcccttcactcccgcggggttcggggacgcttacatgggccacatgctggacggc
gggctgccccctcacgctctgagagatgtgtttggcggacgccggtcggccgccggctcc
tcatccgccgccggcgtcctggccccggaccccttcccccggggccacggggtcgccagg
cccgacagcatggtgttcacgggggaccaggaccaccgcttcacctacaatcacagcccg
ctgcccgcggaggggcagcccaaccccggcgccatccacctgtacaaccacgccatggcg
aggacggacggcggcccgcctctggggcaaccctggggctccccttcccaagcgggggcc
ccgccgctccccctcggcttcgtcccgcacgtcaactcggcggcgacaatcagggggcgg
ggcctgcctttctga
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