Pseudoliparis swirei (Mariana hadal snailfish): 130205926
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Entry
130205926 CDS
T09868
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130205926 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130205926 (cnot9)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130205926 (cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
130205926
NCBI-ProteinID:
XP_056289480
LinkDB
All DBs
Position
2:complement(4914578..4920642)
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AA seq
300 aa
AA seq
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MLATGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSC
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPPQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgacgggagcagctgtaactaacgtcacagctctggcccaggtagaccgggag
aaaatctaccaatggatcaatgaattgtccagtccggagacgagagaaaatgccttgctg
gagctgagcaagaaacgcgagtctgtgccagacctggcgccgatgctctggcactcctgt
ggcaccattgctgccctgttgcaggaaatcgtgaacatctatccatcaataaacccacct
acgcttacagctcaccagtctaacagagtgtgcaatgccctggcactgctgcagtgcgtt
gcctcgcacccagagacacggtcggcctttcttgctgctcacatccctcttttcctttac
ccctttctgcacactgtgagcaaaacacgtccgtttgagtacctgcggcttaccagcctc
ggagttataggtgccctggtcaaaacggatgaacaggaagtgattaacttcctcctcacc
actgaaatcatcccgctatgtctccgcatcatggaatcagggagcgagctctccaagacg
gttgctactttcatactgcagaagatcttgttggatgacaccggtctggcttatatatgc
cagacgtacgaacgcttctcccacgtggccatgatccttggcaagatggtgctgcagctc
tctaaagaaccatcagctcgcctgttgaagcacgtcgtccgctgctacctccgcctctca
gacaatctcagggccagagaagccctgcgccagtgtctgcccgaccagctgaaggacagc
acctttgcccaggtgctgaaggacgacaccaccaccaagcgctggctggcacagctggtg
aagaacctccaggagggccaagtcaccgacgccagaggcatcccactggcaccgccacag
tga
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