Pseudoliparis swirei (Mariana hadal snailfish): 130205929
Help
Entry
130205929 CDS
T09868
Name
(RefSeq) nebulin-like
KO
K25865
nebulette
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130205929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205929
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130205929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
SH3_9
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
130205929
NCBI-ProteinID:
XP_056289488
LinkDB
All DBs
Position
16:complement(2016079..2060871)
Genome browser
AA seq
2166 aa
AA seq
DB search
MENKEEKKVEEKKVNIKEEENKKKVEKKEEKVEKEEKKEEENEEVEMKEEKVVEEQKEEE
KVEKKEEKLQRALESELSSGPRPPLPDPAFNRRCSLLLSDVQYRGSVKKDSSSSSLYSLL
PQTNETQFVKELTEIQSQNKYTEEGKKEMRSSLFSQLPETIELQRAKALQQVQSQNQYTE
DARRKASISLYSQLADAPEIQHAVEMSQMHSQVNYRPKVLVKGAPSSLYSQLPDTTETQF
NRELTEMQSEMRYKRRTPERSLYSTLPETLDTLHAKRASELQSQLRYKEKPSGAALFQRL
PETPETARAREASERLSQVKYKEEGKKEMSVSLYSLLPETIDTRHAREAAHLQSQVKYKD
AVRQQSQSSLYHQLSETTETQRAKQQSELQSQNKYQEAGKREASAPLYSLLPHTMETLHA
KDAARLLSEVKYKESAKKEAAGSLYSTLADTSQTSFAREMTNMQSENKYKEDGRRSLPQS
FYSQLPETLDTQFNREVTELQSQMKYKEAGKRDSSSLFSVLPETLETQHAREASLLQSEL
KYKQRSKGDAPSLFHLMPETLDTQFARQQTEMQSEVKYKEDGKKEMSVTLFSLLPDTLHS
QHAKGLTDMQSQAKYKEAGRKQASTPLYHRLPETLETQHAKEASQLQSQVVYKEAVKKEL
PCPVYHQLADTPETQLARELTDMQSQNKYKEEGLRSASQSFYSQLPQTAETQFAQSVSEL
QSEVKYRTSGRRAAGGCLHSVLPETLETQHARQASQIQSQVKYRDPVQQPSSRFSGPPQT
LQTELAKEATELQSQVKYRAEAKKEASSSLYHLLPETAETHFARRMSELQSENKYKQDKE
ELPNSLFSLLPETLTTQFVKEMKETHSQVKYKQDGKQLTSLYSKLPETLETKHAKEATEL
QSENKYKDGGRKEMTLSLYAQLPETLETQFNREMSDIQSANKYKESSRKLQATSLYSQLP
ETNDTQFTREVTDMQSEVRYKAAGRSDASGSLYSKLPETLDTRHAKEASRLQSQVRYKQD
GLKEAGVSLYHQLPETTDTQLAKEQRDVCSEVKYRADGRKQSSLNLFSLLPETPETRFAK
RMSEMQSENKYKQDKEELPNSLFSLLPETLTTQFVKEMKETHSQVKYKEAGKKEASSSLY
HQLPETLETRRVKEVTGLQSENQYRRSGQRAAASSLYARLPQTAETQLAAKMSELQSENK
YREDGLRSRQQSAYSTLPQTAETQFHRTVSDLQSEARYKEASRKEASSCLYHQLPVTMET
LHAKEATELQSQVKYKEEGKKEQSTNLYSTLPQTEETRSARAAMELQSERKYKQSGGPET
SCSFQRMAETRDTAFVKHVSELQSENKYKQDKEELPNSLFSLLPETLTTQFVKEMKETHS
QSKYKEASKKDLGSSLYSVLSETKDTQHAREQTQLHSEKAYREEGKKEAGSSLYALMPQT
IHTAFSRELSRTQSDKSYKEQYNRDKGKSSFSSMRRLPEVDHAMEVARNQSDVSYRTHTD
QLHRYRSAADRPDLLHAAHATRLASSVAYKSSTNQLVYSDRSLLDRTDIQHAKQASELAS
QVKYKESFDRDLKGQRPHYNPLDCLSFKHTQAAGALASQVKYRSPQEPGGGSALPNLLQL
EHLLHASKLQSNVEYKKKSKEVKAQYHTGTVEQLLHQENARHSQVKYQEEHRRSRGSSQM
EFGDTEMYKVSKEAQRMQSEREYRRDYEEQIKGKSLMDVDQTPGYLTACHASSLLSEKEY
RKDPESQTDQLREHSYGTVTDTPELLHAAYLKDVYSQKKYRGEAELLKGRCSLGAETPEM
QRVKNNQRHISSLQYCWDSKLMRGLVSSVTDTPEIVLARDNAKRVSEVCYREEVGRGTAV
TDTPEMERVRRNQDNISSVKYRQSWVKTSSVGVTPELERVRQNQENISSVKYQRGLREMK
ASSTGLDTPEYRRVRRSQDSVSMAKYHEDFKRARARGCTPARGCTPGLDEPGMERYQRAN
QTLAEAGYGKGIRPQAMETDRRPGGIIVDLKAWRTDPGSIFDVDPLEDEVQSKSLRRMSE
RLERRPFSRQSVGSLTSDLWDRSSADTPAPVLPGAYHHQGAVQQHGYMHQTSMSSVRSVA
SPPHAGALRVFRALYDYAAQDHDEVSFRDGDVIVNAQPIDEGWMYGTVQRTGKSGMLPAN
YVEGCN
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaggaggagaagaaggtggaggagaagaaggtaaacattaaggaggaggag
aataagaagaaggtggagaagaaggaggagaaggtggagaaggaggagaagaaagaggag
gagaatgaggaggtcgagatgaaggaggagaaggtggtggaggagcagaaggaggaggag
aaggtggagaagaaggaggagaagctccagcgagctctggaatcggagctctcctccggg
cccaggcctcctctccctgaccccgccttcaacaggaggtgcagcctgctcctcagcgac
gttcagtacagaggaagcgtgaagaaggactcctcctcctcctctctttactctctgctg
cctcaaaccaacgagactcagtttgtcaaggagctgacggagatccagagtcagaacaag
tacacagaggaagggaagaaggagatgaggagcagcttgttctctcagctccccgaaacc
atcgagctgcagcgggccaaggccctgcagcaggtccagagccagaaccagtacacggag
gacgccaggaggaaggcctccatctctctctactctcaactcgccgacgctccagaaatc
caacacgctgtggagatgtctcagatgcacagccaggtgaactatcggcccaaggtgctg
gtgaagggagcgccctcctcgctctactctcagctgcctgacaccacggagacccagttc
aacagagagctgacggagatgcagagcgagatgaggtacaagcggaggacaccggagcgc
tctctgtactccactctgccggagactctggacacgctgcacgccaaacgggcgtctgag
ctgcagagtcagctgaggtacaaggagaagccgagcggcgccgctctgttccagcggctg
ccggagacgccggagacggcccgcgcccgggaggcctcggagcggctcagccaggtgaag
tacaaagaggaggggaagaaggagatgagcgtcagcctgtactcgctgctgccggagacc
atcgacacgcggcacgccagagaggcggcgcacctgcagagccaggtgaagtataaagac
gccgtgaggcagcagagccagagcagtttgtaccatcagctctcggagaccacggagact
cagcgggccaagcagcagtctgagctgcagagccagaacaagtaccaggaggcggggaag
agggaggcgagcgcgcctctgtactcgctgctgcctcacaccatggagacgctgcacgcc
aaggacgccgcccggctgctcagcgaggttaaatacaaagagagcgccaagaaggaggcg
gccggctcgctctactccacgctggccgacacgtctcagaccagcttcgccagagagatg
accaacatgcagagcgagaacaagtacaaggaggacgggaggaggagccttcctcagagc
ttctactctcagctcccggagacgctcgacacccagttcaacagagaggtgacggagctg
cagagccagatgaagtacaaagaagcaggaaagagagactccagctctctgttctccgtt
ctaccagaaactctggagacgcaacatgccagagaggcctccctgctgcagagtgagctg
aagtacaagcagagatcaaagggcgacgcccccagcctgttccacctgatgccggagacc
ctggacacgcagttcgcccggcagcagacggagatgcagagcgaggtcaagtacaaggag
gacgggaagaaggagatgagcgtcaccctgttctccctgctgcccgacaccctccactcc
cagcatgcaaaggggctgaccgacatgcagagccaggccaagtacaaggaggccggcagg
aagcaggcgtccacgccgctgtaccaccggctgcccgagaccctggagacgcagcacgcc
aaggaggcctcgcagctgcagagccaggtggtctacaaggaggctgtgaagaaggagctg
ccgtgtccggtctaccaccagctggccgacaccccggagacgcagctcgcccgcgagctc
acggacatgcagagccagaacaagtacaaggaggaggggctgaggagcgcctctcagagt
ttttactctcagcttcctcaaaccgccgagacgcagtttgcccagagcgtctctgagctg
cagagcgaggtgaagtaccggacgtcggggcgccgggccgccggcggctgtctgcactcg
gtgctgccggagactctggagacccagcacgcccgacaggcctcccagatccagagccag
gtgaagtacagagaccccgtgcagcagcccagcagcaggttctccggcccgcctcagacc
ctccagacggagctcgccaaggaggccacggagctccagagtcaggtgaaatacagagcg
gaggcgaagaaggaggcgtcctcctcgctctaccacctcctccccgagacggccgagacg
cacttcgccagacggatgtcggagctccagagcgagaacaagtacaagcaggacaaagag
gagctgcccaactcgctgttctctctgctgccggagacgctgaccacgcagtttgtgaag
gagatgaaggagacgcacagccaggtgaagtacaagcaggatgggaagcagctgacttct
ctttactccaaactacctgaaactctggagaccaaacacgctaaagaagcaacggagctg
cagagtgaaaacaagtacaaagatggaggacggaaggagatgacgttgtctctatacgcc
cagctgcccgaaaccctggagacgcagttcaaccgagagatgagcgacatacagagcgcg
aacaaatacaaggagagcagcaggaagcttcaggccaccagcctctactctcagctccct
gagaccaacgacacccagttcaccagagaggtcaccgacatgcagagtgaggtcaggtac
aaagcggcggggcggagcgacgcgtccggctcgctgtactcgaagctgcccgagactctg
gacacgcggcacgccaaggaggcgtctcggctgcagagccaggtgcggtacaagcaggac
ggcctgaaggaggccggcgtgtctctgtaccaccagctccccgagaccaccgacacacag
ctggccaaggagcagagggacgtgtgcagcgaggtgaagtaccgagccgacggcaggaag
cagagctccctcaacttgttctcgctgctccccgagacgccggagacccggttcgccaag
cggatgtcggagatgcagagcgagaacaagtacaagcaggacaaagaggagctgcccaac
tcgctgttctctctgctgccggagacgctgaccacgcagtttgtgaaggagatgaaggag
acgcacagccaggtcaagtacaaggaggcaggaaagaaggaggcgagcagttctctgtac
caccagctgcccgagaccctggagacgcggcgcgtgaaggaggtcacggggctgcagagc
gagaaccagtacaggcgcagcgggcagcgggccgcagcctccagtctctacgcccgcttg
ccgcagacggccgagacgcagctcgccgccaagatgtcggagctgcagagcgagaacaag
tacagggaggacgggctgaggagccgccagcagagcgcctactccacgctgccgcagacg
gccgagacgcagttccacagaaccgtctcggatctgcagagcgaggccaggtacaaggag
gcgagcaggaaggaggcgagcagctgtctgtaccaccagcttccggtaaccatggagacg
ctgcacgccaaagaggcgactgagctgcagagtcaggtgaagtacaaggaggaggggaag
aaggagcagagcaccaacctttactccaccctgcctcagacggaggagaccaggtcggct
cgagccgccatggagctgcagagtgagcgtaaatacaagcagagcggcggcccggagacg
agctgcagcttccagcgcatggcggagaccagagacacggcgttcgtgaagcacgtgtcg
gagctgcagagcgagaacaagtacaagcaggacaaagaggagctgcccaactcgctgttc
tctctgctgccggagacgctgaccacgcagtttgtgaaggagatgaaggagacgcacagc
cagagtaaatacaaggaggcgagtaagaaggatctgggcagctctctgtattctgtgctg
tcagagaccaaagacactcaacatgccagagagcagacccagctgcacagcgagaaggcg
tacagggaggagggcaagaaggaggcgggcagcagcctgtacgccctgatgccccaaacc
atccacacggcgttctccagagagctgagccggacgcagagcgacaagtcctataaggag
cagtacaaccgtgacaaggggaagtcgagcttctcctccatgaggaggctcccggaggtg
gaccacgccatggaggtggccaggaaccagagcgatgtcagctacaggactcacacagac
cagctgcaccggtaccgctcagccgccgaccggccggacctgctgcacgccgcccacgcc
acgcggctggccagcagcgtggcctataagagcagcaccaatcagcttgtgtacagcgac
cgctccttattggacagaacagacatccagcacgccaagcaggcctcagagctggccagc
caggtgaagtacaaggagagcttcgacagagatttaaagggccagcgtcctcattacaac
cctctggactgtctgtccttcaagcacacgcaggccgccggggccctggccagtcaggtg
aagtacaggtccccccaggagccgggcgggggctccgccctgcccaacctgctgcagctg
gagcacctgctgcacgccagcaagctgcagagcaacgtggagtacaagaagaagtccaag
gaggtgaaggctcagtaccacacgggcacggtggagcagctcctccaccaggagaacgcc
cggcacagccaggtgaagtaccaggaggagcacaggaggagcagagggagctcccagatg
gagtttggagacactgagatgtacaaagtgtcgaaagaagctcagaggatgcagagcgag
agagagtacaggagggactatgaggagcagattaaaggtaaatccttgatggacgtggac
cagacccccggatacctgacggcctgccacgccagcagcctgctgagcgagaaggagtac
cgtaaggacccggagagccagacggaccagctcagagaacactcctacgggacggtgaca
gacacacctgagctgctgcacgccgcctacctcaaagacgtctacagccagaagaagtac
cggggcgaggcggagctcctgaagggccgctgcagtctgggggcggagactccggagatg
cagcgcgtgaagaacaaccagagacacatcagctctctgcagtactgctgggactcgaag
ctgatgagaggcctcgtgtcttcagtcaccgacacgccggagatcgtcctcgccagagac
aacgccaagcgggtcagcgaggtctgctacagggaggaagtgggtcgtggcaccgccgtc
accgacacacctgagatggagcgagtccgacgtaaccaggacaacatcagctcggtgaag
tacaggcagagttgggtgaagacctccagtgtgggagtgactccagaactggagcgagtc
cgacagaaccaggagaacatcagctcggtgaagtaccagcgcgggctgcgggagatgaag
gccagcagcaccgggctggacacacctgagtaccggcgggtcaggaggtcacaggactcc
gtctccatggccaagtaccacgaggacttcaagcgtgcgcgcgctcgcggctgcacgccc
gctcgcggctgcacgcccggattggacgagcccggcatggagcgctaccagagggccaat
cagacgctggcggaggcgggatatgggaaagggatccgcccacaagcgatggagacggac
aggcggccgggaggcatcatcgtggacctgaaggcgtggcggaccgacccgggctccatc
tttgacgtggaccccctggaggacgaggtccagtccaagagcctccgccggatgtccgag
cggctcgaacgccggccgttctcccggcagtccgtcggctcgctgacctctgacctctgg
gaccgcagcagcgccgacacccccgctcccgtcctccccggagcgtaccaccaccagggg
gcagtgcagcagcacggctacatgcaccagaccagcatgtcgtccgtgagatccgtcgcc
tcccccccgcacgccggcgccttgcgcgtcttccgggcgctgtacgactacgcggcccag
gaccacgacgaggtttccttccgggacggagacgtcatcgtcaacgctcagcccatcgac
gagggctggatgtacggcaccgtgcagcgcaccggcaagtcgggcatgctgcccgccaac
tatgtggagggctgcaactag
DBGET
integrated database retrieval system
