Pseudoliparis swirei (Mariana hadal snailfish): 130205934
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Entry
130205934 CDS
T09868
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130205934 (ascc3)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130205934 (ascc3)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130205934 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Pua-like
Motif
Other DBs
NCBI-GeneID:
130205934
NCBI-ProteinID:
XP_056289492
LinkDB
All DBs
Position
16:20643400..20812742
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKREDVTEQLYDLKTKRLKRRERFAREGLTWKKIFHFCSEHQDK
VKQQSASQELKNLLLAAKEIVGTEHGQAAIESAAVFLFETFHNTDHVGTEETRAIKQMFG
PFPSSAAEASCACVARLVAQLGDSRVENFIQTVCSRPNPQRGSAFGRNIAFSHDCYALDP
LEDLPCSGTQEDSTSLDFLNFLNNQQSERRAGEEEGSSSGRALSSRDDEAVLRTEVEKFL
DGGNMISSSPEELCTSLFEMLASHKSNDELQNELFELLGPEGLDMISVLLRRRAAIVDSL
LSIPTDRTSYPADMSRLVGGEGTKPTYGCQVTIQSEQEKQMMKMYRREEKRERKRGKGID
DSDFSDAALTFDPREMRIQREQALLTARREPVLSRERVYERIRYPNVYDCYAEATKMPAF
VGGARLLLPEGIRRENTKMYEEVEIPPSQPMAIGFEEKPIFIAELDEIAQLVFKGMTSLN
RIQSLVYETAYNTNENLLICAPTGAGKTNIAMLTVLHEIHQHIQGGVIKKDEFKIIYVAP
MKALAAEMTKYFSKRLQPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
TFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLHDMEEVCYNKVLVQVKNGHQV
MVFVHARNATVRTGMGLIEMAKNHGETSFFQPVQGSDYGHCEKQVQRSRNKEMKEMFPEG
FGIHHAGMLRSDRSLMESMFSKGHLKVLICTATLAWGVNLPAHAVIIKGTQIYNAKRGTL
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDSLSDNL
NAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPSLLLYRKELVVESG
RKLDKAKMIRFEERTGYFASTDMGRTASHFYITYNTIETFNELFNSQRTEADILSIVSKA
EEFDQLKVRDEEMEELEQLMCNYCELPAAGGVENGYGKVNILLQTYISRGEVDSFSLISD
LSYVAQNAARIVRALFEIALRKRWPTMTYRLLTLCKMIDKRLWGFGHPLRQFHNLSHIVL
NRLEEKKLTVEKLKEMEKDEIGHMLHHVNVGLAVKQCVHQIPAITMEANIQPITRTVLRV
RLVVTPDFRWSDQVHGSVGEPWWLWVEDPINDHIYHSEHFLLQKKQVVTGEPQHIVFTIP
IFEPLPSQYYIKVVSDRWLGAEAICIINFQNLILPERHPPHTELLDLQPLPVTALCNREY
ESLYKFTHFNPIQTQIFHTLYHSDTNVLLGAPTGSGKTIAAEMAMFRVFNMYPNAKVVYI
APLKALVRERIEDWKVRFEEQLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARD
LADWLGIKQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLSALDLIAFLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGL
HHAGLHERDRRTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTKRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAE
IAAGTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDVSHESINKFLSKLVQKSLRELECS
YCIEIKEDDRTIEPLTYGRIGSYYYLKHQTIGTFKERLKAEMPIQELLSILTEAEEYAEL
PVRHNEDQLNSQLAQQLPLQVNPRSYDSAHTKTHLLLQAHFSHAALPCPDYTTDTKTVLD
NTIRICQAMLDVAANEGWLVTAISICNLVQMIIQGRWLHDSSLLTLPHVEQQDLYLFRKW
ANRKGRSNTGGFNLPIEGLPELIAACDGKESVFAAIVGQEFESSQIAEAWSFLSHLPVLQ
VHMSVKGWWERGQEQTERPLPAAGANPKEASGWLDVHADQEYVLQVSLRRMNLGQQRRKQ
DSKAQAPRFPKNKDEGWFLVLGEVDRKELLAVKRVGYVRHHSAVSVAFYTPERTGKCIYT
LYLMSDSYLGLDQQYDIHLNVTAASITAQVNTEVSDSVMDRSGKASGTR
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggctcactggggctctgcgctccttctccaacgtcagcaagagggag
gacgtcactgagcagctctatgacttgaagaccaaacgactgaagagacgggagcggttt
gccagagagggtctgacatggaagaagattttccatttctgctccgagcatcaggacaaa
gttaaacagcaatctgccagtcaggaactgaagaacctccttctggcagccaaggaaatt
gtggggaccgaacacggccaggcagccattgaaagtgctgccgtctttctgttcgagacc
ttccacaacaccgaccatgtgggcacagaggagacccgggccatcaaacagatgttcggc
cccttcccgtcgtctgcagccgaagcctcctgcgcctgcgtggcccgcctggtggctcaa
ctcggagattcccgagttgagaacttcatccagaccgtgtgctcccgtcccaacccccaa
cgaggctcggcttttggacgcaacatcgccttctcgcatgactgctacgcactggaccct
ctggaggacctgccctgctccggcacccaggaggatagcacaagtctggacttcctcaac
ttcctcaacaaccagcagagcgagaggagggccggcgaggaggaggggtccagctcggga
agagctctgagctctcgggacgacgaagccgtccttcggactgaggtggagaagtttctg
gatggcggcaacatgatctcgtccagcccagaggagctgtgcacctccctgtttgaaatg
ctggcctcccacaagagcaacgacgagctgcagaacgagctgttcgagctgctgggccca
gaggggctggatatgatctccgtcctcctccggcgccgggcggccatcgtcgactccctc
ctcagcatcccgactgacaggaccagctacccagcagatatgagccggctagtcggtgga
gaaggcaccaagcccacctacgggtgccaggtgacaatccagtcagagcaggagaaacag
atgatgaagatgtaccgccgggaggagaagagagagaggaagagaggcaaagggatagac
gacagcgacttttccgatgccgccctgacctttgaccccagagagatgagaatccagcgg
gagcaggccctgctgacggcgcggcgggagcccgtgctgagcagagagcgggtgtacgaa
cgcattcgctaccccaacgtctacgactgctacgcggaggccacgaagatgccggcgttt
gtgggaggagccaggttgctgctacccgagggaatccgcagagagaacaccaagatgtat
gaagaggtggagatcccacccagccaacccatggccatcggctttgaagagaagcccatc
ttcatcgctgagctggatgagatcgcccagctggtgttcaaggggatgacgagtctgaac
cggatccagtccttggtctacgagacggcctacaacaccaacgaaaaccttctcatctgc
gccccgaccggcgccggcaagaccaacatcgccatgctgaccgtcctccacgagatccac
cagcacattcagggcggcgtcatcaagaaggatgaattcaagatcatatacgtggctccg
atgaaggccttggcagccgagatgactaaatacttcagtaagcgattgcagccactgggc
atcgccgttaaagaactcactggagacatgcagctcaccaaaggagagatcctacgaaca
cagatgttggtcacgaccccggagaagtgggacgtcgtgaccaggaaaagtgtcggagat
gtggctctctcccagattgtgcgtctcctaatcttggatgaagtgcacctcctccatgaa
gaccgaggaccggtactggagagcctggtggcccggaccatcagacaggtggaatccacc
cagagtatgatcaggatcctgggactatcagccaccctgcccaactatctggatgtggcc
accttcctgcacgtcaacccctacatcggcctcttcttcttcgacagtcgcttcagaccg
gtgcccctcggacaaacctttgttggcatcaaatccacgaacaagatccagcagcttcat
gacatggaggaggtgtgttacaacaaagttctggtgcaggttaaaaacggtcatcaggtg
atggtgttcgtccacgctcgtaatgccacagtgaggacgggcatggggctgatcgagatg
gcaaagaaccacggagagacgagcttcttccaaccggtgcagggttcagactacggccac
tgtgagaaacaggtccagcgctccaggaacaaggagatgaaggagatgttccccgaaggc
tttggcatccatcacgccggcatgctgcggtccgaccgcagcctgatggagagcatgttc
tccaagggccacctgaaggtgctgatctgtactgccaccctggcctggggagtgaacctg
ccggcgcatgcagtcatcatcaagggcactcagatctacaacgccaagcgcggcaccctg
gtggatctgggcatcctggacgtcatgcagattttcgggcgcgccggtcgcccccagttc
gacaagtacggcgagggcaccatcatcaccacccacgacaagctgagccactacttgacg
ctgctcacccagcagaaccccatcgagagtcagttcctggacagcctgtccgacaacctc
aacgccgagatcgctcttggaacggtgaccaacgtggaggaggcagtgaagtggctcagt
tatacttacctttatgttcgcatgagggctaaccctctggcttacggcatcaaccacaag
gcctatcagatggatccgtccttgctgctgtacagaaaggagctcgtggtggagtcaggc
agaaagctggataaggcaaagatgatccgcttcgaagagcgcactggctacttcgcctcc
actgacatgggcaggaccgccagccacttctacatcacatacaacaccatagagacattc
aatgaactgttcaactctcagcggacagaagctgacatcctcagtatcgtctccaaggcc
gaagagttcgatcagcttaaggtccgtgatgaggagatggaggagctggaacagttgatg
tgtaactactgtgagctgccggctgcaggtggggtggagaacggctacggcaaggtcaac
attctgctccagacgtacatcagccgaggagaggtggacagcttctcactcatctcggac
ctgtcgtacgtggcccagaatgctgctcgcatcgtcagggccctgtttgagattgccctg
aggaagcggtggccgacgatgacctaccgactgctcaccctctgcaagatgatcgataag
cgtctgtggggctttggccaccctctccgccagttccacaatcttagccacattgtgcta
aaccgcctggaggagaagaagctcactgtggaaaagctaaaggaaatggagaaggatgag
attggtcacatgctgcaccacgtcaacgtcggcctcgcagtcaaacagtgtgtccaccag
atccccgccatcacgatggaggccaacattcagccaatcacacgcaccgtcctacgggtt
cgtctcgtcgtcacgcccgactttcgctggagcgatcaggtccacggctcggtgggcgag
ccgtggtggctgtgggtggaggatcccatcaatgatcacatctaccactctgagcacttc
ctcctacagaagaaacaggtggtgacaggagagcctcagcatatagtcttcaccatcccc
atctttgagccgctgccctcccagtactacatcaaagtggtgtctgaccgatggctcggg
gccgaggccatctgcatcattaacttccagaacctcatcttacccgagagacacccccca
cacactgagctgctggacctgcagccgctgccggtgacggctctgtgtaaccgggagtac
gagagcctgtacaagttcacccacttcaaccccatccagactcagatcttccacacgctc
tatcacagcgacaccaacgtcctgctgggggcgccaacgggctctgggaaaaccatcgcc
gcagaaatggccatgttccgggtcttcaacatgtatcccaacgctaaggtggtgtacatc
gccccgctgaaagccctggtcagagagaggatcgaggactggaaggtcaggtttgaagag
caactggggaagaaagtggtggagctgacgggtgacgtgactccagacatgagagcgatc
gctcaggccgacctcatcgtcaccacgccggagaagtgggacggagtgagccgaagctgg
cagaacaggagctacgtccagaaagtagccattctcatcatcgacgagatccacctgctg
ggtgaggacagaggtccggtgttggaggtcatcgtgtcccggaccaacttcatctcctcc
cacacatcgaagaccgtccgagtcgtgggcctgtccaccgcgctggccaacgctcgagac
ctcgccgactggctgggaatcaaacaggtgggtttgtttaacttccgtccgtctgtacgc
cccgtaccgctggaagttcacatccacggtttccccgggcaacactactgcccccgcatg
gccagcatgaacaagcctaccttccaagcgatacgtagccactcccccgccaagccggtg
ctgattttcgtctcctcccggcggcaaacccgactgtctgctctcgacctcatcgccttc
ctggccacagaggacaaccccaagcagtggctgcaccaggacgagagagagatagaggcg
atcatcgccacggtgcgggattccaacctgaagctgacgctggcctttgggatcggcttg
catcacgccggcctgcacgagagggacagaaggacggtggaggagctgttcgtcaactgt
aagattcaggttctgattgccaccagtactctggcttggggggtgaacttccctgctcac
ctggtggtcgttaagggaactgaatactttgatggcaaaaccaagcgctacgtggactac
cccattacagatgttctgcagatgatggggcgagcaggtcggcctcagtttgatgaccag
ggcaaagccgttatcctcgtccatgacatcaagaaggacttctacaagaagttcctctat
gagccgttccccgtcgagtccagcctcctcagtgtgctgtcagaccatctgaatgctgag
attgctgcaggaaccatctcatccaaacaggatgcaatggactacatcacctggacctac
ttcttcaggcggctggtgatgaacccgagttattacagcctagaagacgtcagccacgag
tccattaacaaattcctgtccaagctcgtccagaaaagcctgcgggagctggagtgctct
tactgcatcgagataaaggaggatgaccggaccattgagccactgacctacggtcgcatc
ggatcctattactacttgaagcatcagaccatcggcacatttaaagagcgcctgaaggcg
gagatgcccattcaagagttgctctctattctgacggaggcagaagagtatgccgagctt
cccgtcagacacaatgaggaccagctgaacagccagctggctcagcagctccccctgcag
gtcaacccgcgctcctacgacagcgcccacaccaagacccatctgctgctgcaggcccac
ttcagccacgccgcgctgccgtgccctgactacaccaccgataccaagacggtactggac
aacacgatccgaatctgtcaggcgatgctggacgtagctgccaatgaaggctggctcgtt
acggccatcagcatctgcaacctggtgcagatgatcatccagggccgctggctgcacgac
tcctcgctactgacgctgccacatgttgaacaacaagacctctatctgttcagaaaatgg
gcaaacaggaaggggaggagcaacacgggaggcttcaacttgccaatcgaagggctacct
gagctgattgctgcctgcgacggaaaggaaagtgttttcgctgccatcgtcggtcaggag
tttgaatcaagtcagattgccgaggcctggtccttcctgagtcacctccccgtgctgcag
gtgcacatgagcgtgaagggctggtgggagcggggccaggagcagacggagcgcccgctg
ccagcggcgggggccaacccgaaggaggcgagcggctggctggacgtccacgccgaccag
gagtacgtcctgcaggtgtctctgcggcgcatgaacctgggccagcagaggaggaagcag
gacagtaaggcacaggcgccccggttccccaagaacaaggacgagggctggttcctggtc
ctgggagaggtggatcgcaaggagctgctggcggtcaagcgggtcggatacgtgcgccac
cactcggccgtgtccgtggccttctatacacccgagaggactggaaagtgtatctacaca
ctgtacctgatgagtgacagctacctgggtctggaccagcagtacgacatccacctgaac
gtgacggcggccagcatcacggctcaggtcaacacggaggtgtcggactcggtgatggac
cggtcagggaaagccagcggcaccagatga
DBGET
integrated database retrieval system
