Pseudoliparis swirei (Mariana hadal snailfish): 130205942
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Entry
130205942 CDS
T09868
Symbol
mcm3ap
Name
(RefSeq) LOW QUALITY PROTEIN: germinal-center associated nuclear protein
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130205942 (mcm3ap)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130205942 (mcm3ap)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
130205942 (mcm3ap)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
130205942 (mcm3ap)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
130205942 (mcm3ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
SAC3_GANP
CID_GANP
RRM_1
RRM_PARP14_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130205942
NCBI-ProteinID:
XP_056289515
LinkDB
All DBs
Position
2:4936720..4954151
Genome browser
AA seq
2061 aa
AA seq
DB search
MNPSNPFGSPQSGAFQAPSNATKTGLFPSFGQQTSGIRPQSVGFVPPSAFGQPSVLSQPS
STIFGQPSTQPTSMPATSQAPAFGQPSLGMSSTGFGSSSAPAFGQTGEPDKGSGFGQTPS
FAQPSAFGQPPGFSQQASGFVKQPPAFGQQPSGFAASQMAPVPTAALGQPQPLSFGQSVF
GQPSSTSLPASVFGTAPSVTQSSGFGSSNYSFKPANEAVFKPILNVSPEPAHPQTTSMSS
SPFGSGGSQTASSIINSSGTTATGFSGATSGQLGFSFSQPGAAPSISAQTNNTLATSAPA
NTLQFTFSQPAAPSSSNTKGSTTEPTTPSTFSFVANAHQPQAKSPFGGANVGLPPEFKAR
AETGTEEKGRSVFARLGKGTKRKEDPKVPGEVPEKPAAGGEEEEEEEDEDDVPAVADAPR
HPSKRPLMRSRCPPPGLFGRALSGLRREVTKETEPQASTWEEPESENVHDPGGDVAPTPP
TVQPLTREGLDKAEQSDSTPAPASNPGIATPERRRKSSESLSGMCAADCTAIQCRNVPPS
LNKKDVIEKHFERFGKVNKVLCRPAKNLAIVHFHDHASAAKAKKKGKLLHRHELFLSWQK
KKQSPDEKGSRSAAEKEAEGGSQEDTESKSVSSPLRKPALSSLMAFSRSSPVKKSSIAKS
LQFDSEPQSSERPVPSSLLHLLGLTAETAEDKFRLLEQRDKILRQGRPKRTDLDLSKVFV
GTCPDMCPEKERYMRETRKQLSVFEVLPDPEMVDHSAAIKEYSRSSADQEEPLPHELRPL
PVLSMTMDYLVTQILDQGHDKYRDWYDLVWNRTRAIRKDITQQHLCCPHTVSLIEKCTRF
HVHCAHHLCEERLSTFDAKINNENMTKCLQSLKEMYQDLAMRQVYCPLEAEFRQYSVLLK
LNDGDILREVEQWREEVRNSPEVMLAVQAFTAVNSNNFVRFFKLVKGASYLASCLLHRYF
NQVRAKALSILNIAHTVGPRSTAFPVDDIVRMLMFRSAEETSDFIQQYGLNVNDGVVELS
RIAHQEPDLPLAQKKSEVILAKKTVLIGEVVNGGALPVPLHHTPVCSFDAQNRYRGEGPL
AESTPSQFKAFAAKVEVTVEQVVADMPAGFGLPPAVTGEPAESRDPFGSPEVAHQQQLFQ
PIPQPVRPPSPPPKPRPVYSNEDIMAELNRVIEEVVGAAVMEVAGAGASYATTALAXSSV
QVESLVTEVLGQMLQKMSSAEIELEQERVADEKRKLEEARRRQEHEDLLVQFSFSLRREL
INEVLDETIKETATSEIQQAVEEKSTCVAKCTEQVCTSIVEETLNADVALLVKDLLEAEL
QRILKYIKRWRDVVAVRRQLKRQMRGFPAAPCCVDPRFKLQALAPSAPARPSMADLARGL
VNLGNAGTLALSSTRSLKMREEAIHQMRVHYFYQRLLEERVWEPLDLPALVTENISNPPA
RIFWKAVLLLPSDHESVASLADRILSDWLEVKLGGGGGGSEAREEQPDGALQTLCVTDTL
RDEGQRTHRVHVSIKASRGPLTEDGLSKAEECCELQGTEALIVLLPAMPATEQPGPDEQD
VPLLSALLQLKQLQQASAWHCPLPLAILVPGPECGDTQKLEDALMLRTLVQEGLISEYMF
FFIPETTSDLQGSKRLSQATRWLLARAPPPFPLTCQTLVQLVEAGLGREFSPRVHAHRQD
RVEARLPPQGPAPVVQLYNAVVAHIADEAASRDLGKLSWPPGEFCVRGNRDVVPHLGWNS
AEHLDWLREVILNLQLPAWEQPSATDSWSALCSSIFRYAVQIPVSRSSQPVLMSRLENLL
DRVRGHRHIRTPKSKVARSHWDDEHTRPAFSRIPWDDVLVICIDHKLKDWQVPGPPVCED
AVTDDGEILVYLPTQSSKGFQPPEEWTQALRQTHRERQRETEGADAAACASPSSPSLRQR
LFDSVVEPVEAPTAPLDITHTPTAPELLAHKFLKSLDEEKAESKRFSEQLQRWLDGEALD
HLSTPLFVPSSTLLSMPTTLMHAPTAAVTRRDRSDRAERPQTTPVSMAWRLKELERQILA
SHEEGLACALKLSSLLSIVDD
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatccaatccgtttggcagcccccaaagtggagctttccaagcccctagcaac
gccacgaagaccggtttgttcccgtcgtttggacaacaaacttctggcattcggccccaa
tcggtgggctttgttccgccatcagcgtttggacagccgtccgtcttaagtcagccctca
agtaccatctttggacagccgtctacacagcccacctcaatgcctgcaacaagccaggct
ccagcatttggtcagccatcattgggaatgagtagcacaggcttcggtagtagctctgca
ccagcgtttggacagactggtgaacccgataaaggttcaggatttggccagaccccttcc
tttgcacagccgtcggcgttcgggcagcctccaggtttcagccagcaagcctctggattt
gtcaaacagccaccagcgtttggccaacagccctctgggtttgcagcttcccagatggct
cctgtccccaccgctgctttagggcaacctcagccactgagttttggacagtctgtgttc
ggacagccgtcatctaccagcctccccgccagcgtattcggcacagctccgagtgtgacc
cagagcagcggcttcggatcatccaattacagtttcaagccagccaacgaggcggtgttc
aagcccatcctcaatgtcagtcccgagcccgctcaccctcaaactacttcaatgtccagc
tcaccttttggcagcggcgggtcccagacggcctccagcatcataaatagtagtggcacc
acggcgactggcttctctggggccacgtctggccagctgggcttcagcttctcgcagccg
ggtgcagcgccctctatctccgctcaaaccaataatacacttgcaacgtcagctccagcc
aacacgctgcagttcaccttctcccagccagcagctccctccagctccaacactaaggga
tctaccaccgagcccaccacgccatccacgttcagctttgtagccaacgcccaccagccc
caggcaaaaagcccctttggaggagccaatgttggcctgcctccagaattcaaagctaga
gcagagactggtacagaggagaaagggagaagtgtatttgcacgacttggtaaaggcaca
aagcgaaaggaagatccaaaggtccccggcgaggtcccagagaagcctgccgcaggaggg
gaggaggaggaggaggaggaggatgaggatgatgttccagcagtagcagatgcaccaaga
catccttcaaagaggcccctgatgaggtcccgctgcccaccaccaggcttattcgggaga
gcattaagtggtcttcgtcgagaggtcacaaaggagactgagccgcaggcatcaacgtgg
gaggagccggagagcgaaaatgttcacgatccggggggcgacgtcgctcctactccaccc
acagtgcaaccgctgaccagggaagggctggacaaggctgaacagtcagactcgacgcca
gctccagcctcgaatcccggcatcgcaaccccggagagacgcaggaagagctcggagagc
ctgagtggcatgtgtgccgccgactgcaccgccatccagtgcaggaacgtgcctccatcc
ctcaacaagaaggacgtgatcgagaagcactttgaacgcttcggcaaagtcaataaggtc
ctctgtcggccggccaagaacctggccatcgtgcactttcatgaccatgcatcggcggca
aaggcgaaaaagaaaggcaaacttctgcaccgacacgagcttttcctctcgtggcagaag
aagaagcagagtccagacgagaaagggagcagatcggcggcagagaaggaggcggaggga
ggaagtcaagaggacacagagtccaagtctgtttcctccccactcagaaaacctgcactc
agcagtctgatggccttcagccgcagttctccggtgaagaagtcgtcgatcgcaaagtct
ctgcagtttgactccgagccccagagctcggagcgcccggtgccctcctccctcctccac
ctcctcggcctgacggcggagaccgccgaggacaagtttcgcctcctggagcagagggac
aagatcctgcgtcaaggtcggcccaagaggacggacctggacctgtccaaggtgttcgtg
gggacgtgtcctgacatgtgtccagagaaggagcggtacatgagggaaacgaggaaacag
ctgagcgtcttcgaggtcctcccagatcctgagatggtggatcactcggcagccatcaag
gaatacagtcgctcatcggcggaccaggaagagcccctgccccatgagctgcgccccctg
cctgtgctcagcatgaccatggactacctggtgactcagatcctggaccagggccacgac
aaataccgggactggtacgacctggtctggaaccggacccgcgccatccgcaaggacatc
acccagcagcacctgtgctgccctcacacggtgtcgctgatcgagaagtgcacgcgcttc
cacgtgcactgcgcccaccacctctgcgaggagcgcctgtccacgttcgacgccaagatc
aacaacgagaacatgaccaagtgcctccagagcctgaaggaaatgtaccaggacctggcc
atgcgccaggtctactgccccctggaggcggagtttcgccagtacagcgtgctgctgaag
ctcaacgacggtgacatcctgcgtgaagttgagcaatggcgcgaggaggtgcgtaactcc
cccgaggtgatgttggccgtgcaggccttcacggcggtcaacagcaacaactttgtgcgc
ttcttcaagctggtcaaaggagcgtcctacctcgccagctgcctcctgcaccgatacttc
aatcaggtccgagcgaaagccttgagtatcttgaacatagcccacaccgtggggccgagg
tccacggcgttccccgtggacgacatcgtccggatgttgatgttccgcagcgccgaggag
acgtccgacttcatccagcagtacggcctcaacgtgaacgacggtgtggtggagctgagt
cggatcgcccatcaggagcccgatctgcctctggcccagaagaagtccgaggtcatcctc
gccaagaaaaccgtgttgattggcgaggtggtgaatggaggcgccctgcccgtccctctc
caccacacccccgtctgcagcttcgacgcccagaacaggtaccgcggtgagggccctctg
gccgagtccacgcccagccaatttaaagcttttgctgccaaggtggaagtcacggtcgag
caggtggtggcagacatgcccgctgggttcgggttgcctcccgccgttaccggtgagccg
gcggagtccagggacccgttcggcagcccggaggtcgcccatcagcagcagctgttccag
ccgatacctcagccggtccgaccgccgtcgcctccacccaaacctcggccggtgtacagc
aacgaggacatcatggctgaactaaaccgtgtgattgaggaggtggttggagcagcggtg
atggaggtcgccggcgccggcgccagctatgccacgacggcgcttgcgtaaagcagtgtg
caggtggagtcgctggtgacggaggtgttgggacagatgctgcaaaagatgtcctcagcc
gagatcgagctggagcaggagcgcgtcgccgacgagaaacgcaagctcgaagaagccagg
aggaggcaggagcacgaggacctcctggtccagttcagcttctctctccgcagggagctc
atcaacgaggttttagatgagaccatcaaggagaccgccacctctgagatccagcaggca
gtggaagagaagtcaacgtgcgtcgctaaatgcaccgagcaggtctgcaccagtattgtt
gaggagactctgaatgcagacgtcgctctgttggttaaagaccttcttgaagctgagctg
cagcgcatcctcaagtatatcaaacggtggcgtgatgtggtcgcggtgcgtcggcagctg
aagaggcagatgaggggtttccccgccgccccctgctgcgtggacccgcgattcaaactg
caggctctggctcccagcgcccccgcacggccctccatggccgatctggcccggggtctg
gtcaacctggggaacgccggcaccctggccctctccagcaccagatctttgaaaatgaga
gaagaagcaatccaccagatgagagtccactacttctatcagcggctgctcgaagagaga
gtgtgggagccactcgacctgccggccctggtgacggagaacatctccaacccacccgcc
cgaatattctggaaagctgttctcctcctaccgagcgaccacgagagcgtcgccagcttg
gccgacaggatcctgtccgactggctggaggtgaagctcggcggcggcggcggcgggtca
gaggcgagggaggagcagccagacggcgcgctgcagaccctctgtgtcaccgacacactc
cgggatgaaggacaacgcacccacagagtccacgtcagcatcaaggcgtcccgaggcccc
ctcaccgaagacggcctgtccaaagcggaggagtgctgcgagctccaggggacggaggct
ctgatcgtgttgcttcccgccatgcccgccacggagcagccgggccccgacgagcaggac
gtccctctgctgtcggcgctgcttcagctcaagcagctgcagcaggccagcgcctggcac
tgcccgctgccgctcgccattctggtgccaggaccagagtgcggcgacacacagaaacta
gaagacgccctgatgctgcgcacactggtccaggagggcctgatatcggagtacatgttc
ttcttcatcccagagaccacaagcgacctgcagggatccaaacggctgagccaggctacc
cgttggctgctggcccgggctccgccgcccttcccgctcacctgccagaccctggtgcag
ctcgtagaagccggtctgggtcgcgagttcagccccagggttcacgctcaccgccaggac
cgggtcgaggcgcgcctcccgccccagggccccgcgcccgtcgtccagctgtacaacgcc
gtcgtggcgcacatcgccgacgaagcggcgtcccgggatctcggcaaactctcttggccg
ccgggcgagttctgcgtccgtggtaaccgcgacgtcgtcccccatctgggctggaactct
gccgagcacctcgactggctccgcgaggtcatcctcaacctgcagctgccggcgtgggag
cagccgtctgctacagactcgtggtctgcgctctgctcctccatctttcgctacgccgtc
cagatcccagtctcgcggagcagtcagcccgtcctcatgtcgcgactggaaaacctcctg
gaccgggtccggggccaccgccacatccggacccccaaatccaaggtcgccaggagccac
tgggacgacgagcacacgcgtccggccttcagtcggattccttgggacgacgtgctggtg
atctgcatcgaccacaagctgaaagactggcaggtccccggacccccggtctgtgaagac
gccgtgacggacgatggggagatcctggtttacctgcccacacagtcctcaaagggtttc
cagcccccggaggaatggacccaggccctcagacaaacacaccgagagaggcagcgagag
acggaaggtgcggatgcagcggcctgtgcctcgcccagcagcccgtccctcagacagagg
ttgttcgacagtgtggtggagcccgtcgaggccccgacggccccgctggacatcacgcac
actcccacagcgccagagctcctggcccacaaattcctcaagagcttggatgaggagaag
gccgaaagcaaaaggttctcggagcagcttcagcgctggctggacggtgaagccttggac
cacttgtccactccacttttcgttccatcctcaactctgttgtcgatgcccaccacccta
atgcacgcacccacagctgccgttacacggcgtgatcggtcggacagagcggagcgccct
caaaccacgcccgtatccatggcgtggcgcctgaaggagctcgagcgacagattttggcg
agtcacgaggaagggttggcctgcgcgctgaagctgagtagtctgctgagcatcgttgat
gattga
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integrated database retrieval system
