Pseudoliparis swirei (Mariana hadal snailfish): 130205957
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Entry
130205957 CDS
T09868
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
pswi04114
Oocyte meiosis
pswi04120
Ubiquitin mediated proteolysis
pswi04141
Protein processing in endoplasmic reticulum
pswi04310
Wnt signaling pathway
pswi04340
Hedgehog signaling pathway
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130205957
04120 Ubiquitin mediated proteolysis
130205957
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130205957
04350 TGF-beta signaling pathway
130205957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205957
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
130205957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
130205957
NCBI-ProteinID:
XP_056289534
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Position
16:2778278..2799034
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AA seq
784 aa
AA seq
DB search
MSSNRTQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSVPPAKPSKKSTTPGGAQFVGLELYKRLKEFLKNYLTSLLKDGEDLMDEGVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIERERNGETINTRLISGVVQSYVELGLNEEDAYAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL
EIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPMDSPLGGVQI
MDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVT
NCFKNRYTLQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILVQVLQILLKSKLLVME
DENANVDEVDFKPDTVIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQ
AAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTY
SYLA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaaccggacccagaacccccacggactgaaacagataggcctggaccagatc
tgggacgacctgcgggcgggcatccagcaggtgtacacgcggcagagcatggccaagtcg
cgctacatggaactctacacacatgtatataactattgtaccagcgtgcaccagtccagc
cagggccgcggctcggtgccgccggccaagccctccaaaaagtccaccacgccgggcggc
gctcagttcgtgggcctggagctctacaagcggctcaaagagttcctgaagaactacctg
accagcctgctcaaggacggcgaggacctgatggacgagggcgtgctgaagttctacacg
cagcagtgggaggactaccgcttctccagcaaggtcctcaacgggatctgcgcctacctc
aaccgccactgggtccggcgggagtgcgacgagggacgcaagggcatctacgagatctac
tcgctggcactagtgacctggagggagtgtttattccgacccctcaacaagcaggtaacg
aacgcggtgctgaagctgatcgagcgggagaggaacggggagaccatcaacacccggctg
atcagcggcgtggtccagtcttatgtggagctgggtctgaacgaggaggacgcctacgcc
aagggcccgacgctgtccgtgtacaaagagtactttgagtgccagttcctcaccgacacc
gagcggttctacacgcgcgagagcaccgagttcctgcagcagaacccggtcaccgagtac
atgaagaaggcggaggctcgtctgctggaggagcagcggcgtgtgcaggtctacctccac
gagtccacccaggacgagctggccaggaagtgcgagcaggtgctcattgagaaacacctg
gagatcttccacacggagttccagaacctgctggacgccgacaagaacgaagatctgggc
cggatgtacaacctggtctcgcggatcacggacggtttgggcgagctgaagaaacttcta
gagactcacatccacaaccagggcctggccgccatcgagaagtgcggcgaggcggcgctc
aacgaccccaaagtgtacgtgcagacaaccctggacgtccacaagaagtacaacgccctg
gtcatgtccgccttcaacaacgacgccggcttcgtggccgcactcgacaaggcttgcggc
cgcttcatcaacaacaacgccgtgacccgcatggctcagtcgtccagcaagtccccggag
ctgctggcccggtactgcgactccttactgaagaagagctctaaaaacccagaggaggcg
gagctagaggacacactcaaccaagtgatggttgtgttcaagtacatcgaggacaaagac
gtcttccagaagttctacgccaagatgctcgccaagcgcctcgtccaccagaacagcgcc
agcgacgacgccgaggccagcatgatctccaagctgaagcaagcgtgcggcttcgagtac
acgtccaaactgcagcggatgttccaggacatcggagtcagtaaagacctcaacgagcag
ttcaagaagcacctgaccaactctgagcctatggactctcctctgggcggcgtccagata
atggacttcagtatccaggtgctcagctccgggtcctggccgttccagcagtcctgcacc
ttcgcgctgccttccgagctggagcggagctaccagcgcttcacggcgttctacgccagc
cggcacagcggcaggaagctgacgtggctctaccacctgtccaaaggagagctggtcacc
aactgcttcaagaacaggtacacgctgcaggcctccaccttccagatggccatcctgctg
cagtacaacacggaggacagctacaccgtccagcagctgacggacagcacgcagatcaaa
accgacattttggttcaagttctgcagattttgttaaaatcgaagcttctggtgatggag
gacgagaacgccaatgtggacgaagtggatttcaaacccgacaccgtcatcaaactcttc
ctcggatacaagaataagaagctgagggtgaacatcaacgtgccgatgaagactgagcag
aagcaggagcaggagacgactcacaagaacatcgaggaggaccgcaagctcctcatccag
gctgccatcgtgaggatcatgaagatgaggaaggtcctgaagcaccagcagcttctggct
gaagtgctgaaccagctgtcttccaggttcaagcccagagtccccgtcatcaagaaatgc
atcgacatcctgatagagaaggagtacctggagcgagtggacggtgagaaggacacgtac
agctacctggcctga
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