Pseudoliparis swirei (Mariana hadal snailfish): 130206045
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Entry
130206045 CDS
T09868
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130206045 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206045 (asap1b)
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130206045 (asap1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
Ank_4
BAR
SH3_9
SH3_1
SH3_2
Ank_3
Ank_5
PH_8
A2L_zn_ribbon
DUF4404
Motif
Other DBs
NCBI-GeneID:
130206045
NCBI-ProteinID:
XP_056289717
LinkDB
All DBs
Position
16:7171329..7223503
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AA seq
1147 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVNVLEEGLDQDRTSLQKVKKSVKA
IYNSGQDHVQNEENYTQALDKFGSNFISRDNPDLGTAFVKFSSLTKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKEDSQSKQGGYSMHQLQGN
KEFGCEKKGYLLKKSDGLRKVWQRRQCSVKGGMLTISHATSNRQPVKLNLLTCQVKPSSE
DRKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALHMAFRGEQSGGGEDGLDDLTK
AIIEDVLRMPGNEVCCDCGASDPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKL
GTSELLLAKNVGNSSFNEIMEGNLTSPSPKPTPSSDMTVRKEFINAKYVDHKYARKTCTS
ASAKMIDLFEAVQSRDLLSLIQVYAEGVELMEPLPEVGPESGETALHYSVRTADQTSLHL
VDFLVQNSGNLDKQTEWGNTALHYCSMFEKPECLKLLLRGKPATDITNQNGETALDVARR
LRNPQCEEALVQAAEGKFNPHIHVEYEWSLRLEEMDESDDDLDDKPSPIKKDRSPRPQSF
CHSSSLSPHDKLSLPGFISQRDKQQRLSYSAFTNQMYSASTDLTSSPVADGPPLPPRNLG
KAPPPPGPPATLTPGGSSTLSKKRPPPPPPGHKRTLSDPPSPLSHSPHSKGGLTGGSDST
PPPVSKMSPVSNKFEGIPQQQSSTSSNTKSTLGPRVLPKLPQKVALRKIDTIHHPSMDKP
SLPPEVFQKSPSAAEPPQKAPLADRPQPGDLPPKPQPSELPPKPGELPPKPQLSDLPPKP
QLGDLPPKPQLKDLPPKPQLADIPPKPGPAEPSSRPHPSEVQRPQTQPPPPPQTHPPAQT
HPQPQTQPQPPAQPPDSPSPSQQANIGTPTPQAAEDTNGTPAGTAETPVPLPRKINTILN
VQGKSKTRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGEPDRKGVFPMS
FVHILSD
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcaaatatcggtgtccgagtttctctcggagacgacagaggattacaattcc
ccgacaacatccagcttcaccacccgactgcagagctgcaggaacacagtgaacgtgctg
gaggaggggctggaccaggaccggacgtccctgcagaaagtgaagaagtctgtgaaggcc
atctacaattcaggacaagaccacgtccagaatgaagagaactacactcaggctctggac
aaatttggcagcaacttcatcagccgtgacaaccccgacctgggaacggcttttgtcaag
ttctcctccctcaccaaggagctgtctgcgctgctgaagaacctgctccagagcctcagc
cacaatgtgatcttcaccctggactcgctactgaagggcgatttgaaaggcgtgaaaggg
gacatcaagaagcccttcgacaaagcatggaaggactacgaggccaagtttacaaagatc
gagaaggagaagcgagagcacgccaagcaacacggaatgatccgcaccgagatcaccggg
gcggaaatcgccgaggagatggagaaggagaggcgtctctttcagctccagatgtgcgag
tacctgatcaaagtaaatgagatcaagaccaagaaaggagtggacctcctccagaacctg
attaagtattaccacgcacagtgcaatttcttccaagatggcttgaagacagccgataag
ctgaagcagtacatcgagaagctcgcggcggatctctacaacatcaagcagactcaggat
gaggagaagaagcagctgactgccctgcgggatctgatcaagtcctccctccagctggac
cagaaggaggactcgcagagtaagcaggggggctacagcatgcaccagctgcaggggaac
aaggagtttggctgtgagaagaaaggctacctgctgaagaagagtgacgggctgaggaag
gtgtggcagaggaggcagtgctcagtgaaggggggcatgctcaccatctctcatgccaca
tccaacaggcagccggtcaaactcaacctgctcacctgccaggtgaagcccagttctgag
gacaggaagtgctttgatctcatttcccataaccggacatatcatttccaagctgaagat
gaacaggagtttgtcatctggatctcggtgctgaccaacagtaaggaggaggccctgcac
atggcgttccgcggcgagcagagcggcggcggcgaggacggtttagacgatctgactaaa
gccatcatagaagacgtgctgcgcatgccgggcaacgaagtctgctgcgactgcggcgcc
tcagatccgaagtggctgtccaccaacctggggatcctgacctgcatcgagtgctccggc
atccaccgcgagatgggagtccacatctctcgcatccagtccatggagctcgacaagctg
ggaacttcagaactcttgctggccaagaatgtaggcaacagtagtttcaatgagatcatg
gagggaaacctcacctccccttcaccaaagcccactccatccagtgacatgactgtgagg
aaggagttcatcaacgctaagtatgtggaccacaagtatgctaggaagacgtgtacgtcc
gcgtcggctaaaatgatcgacctgtttgaggcggttcagtccagggatctgctgtccctc
atccaggtctacgcagagggggttgaactgatggagccgctcccagaggttggaccggaa
tccggggagacggcactgcactactctgtacggactgctgaccagacctctctgcacttg
gtggacttcctcgtgcagaacagcggtaacctggataagcagacggagtgggggaacacg
gcccttcattactgcagcatgttcgagaagcccgagtgcctcaagttgctcctgaggggc
aagccggccactgatatcaccaatcagaacggagagacggcgctggatgttgccaggcga
ctgaggaaccctcagtgtgaggaggcactggtgcaggctgcagaggggaagttcaacccc
cacatccatgtggagtacgagtggagcctccgactggaggagatggacgagagcgacgac
gacctcgacgataagcccagtcccatcaagaaggaccgctccccgaggcctcagagcttc
tgccactcctccagcctctctccccatgacaagctctccctgccgggcttcatcagccag
agggacaaacagcagcgtctgtcctacagcgccttcaccaaccagatgtacagcgcctcc
accgacctcacctcctcccccgtggccgacgggccgccgctgccacccaggaacctggga
aaagctcctcccccacctggccctcccgctacactcacaccgggaggcagctccaccctg
tccaagaagagacctccgcccccacctcctggacacaaacgcaccctgtctgacccaccg
agcccgctctctcacagtccacacagtaaagggggcttgactgggggaagcgactccacc
cctccgcctgtcagcaagatgtctcctgtttctaacaagtttgaaggaattcctcagcag
caaagctctacttcaagcaacacaaagtcgacacttggtccaagggttcttcccaaacta
cctcagaaagtggcattgcggaagattgacaccatacaccacccgtctatggataagccc
agcctccctccagaggtcttccagaagtccccgtcagcggctgagcccccgcagaaggct
cctctggccgacaggcctcagccgggagacctgccccccaagccgcagccgtctgaactt
cctcctaaacccggagaacttccaccgaagccgcagctgtcagacctccctccgaagcct
cagctcggcgacctcccgcccaaaccccagctcaaagacctgcctcccaagcctcagctc
gccgacatcccccccaaacctggaccagccgagccctcttccaggccgcatcccagtgag
gtgcaaaggcctcaaacgcaaccgccgcctccacctcaaactcatcctccagctcaaact
catcctcaacctcaaactcagcctcagcctccagctcagcctccagactcaccgtcaccg
agtcagcaagccaatatcgggacccccaccccacaagctgctgaagacaccaatgggacc
ccagcagggactgcggagacaccagtgcccctcccgaggaagatcaacacgattttaaat
gtccaggggaagagcaaaacccgtcgcgtgaagacgatctacgactgccaggctgacaat
gacgacgaactgacttttattgaaggagaggtgattatagtgacgggagaagaggaccag
gagtggtggatcgggcacattgaaggcgagccggaccgaaagggggtgttccccatgtct
tttgtgcacatcctgagtgactga
DBGET
integrated database retrieval system
