Pseudoliparis swirei (Mariana hadal snailfish): 130206074
Help
Entry
130206074 CDS
T09868
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130206074 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130206074 (ube3c)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130206074 (ube3c)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130206074 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
130206074
NCBI-ProteinID:
XP_056289774
LinkDB
All DBs
Position
16:complement(8500578..8528158)
Genome browser
AA seq
1081 aa
AA seq
DB search
MFSFEGDFKTRPNVSLGGASKKEEKASLLHRTQEERRKREDERKRLKNSIIIQSYIRGYQ
DLKRQYAIQRARFDECAGQTQGGGAPRGLDSHVLCLLSRQLIFFYRQSVDAHRLIWLCQN
LVKHNSQFVKLLVGPQRQTCIFQIKRILGFCCRLLQNCKDDSLNVTVPMRMLEIFSSEKT
YLPIIPDANYVASLLEQILHYMVQTGYYRSLYILVNHRLPSSLEYSDAPSIPMASTLLEH
ILKPLHFTYSSCTTGARQFVFGAFTKEFISPPFTEQIFHFFIPALSDVRLSFPFEAFLSS
LQVTMSSSSAAQSEAPWLFYFVLSAGENCLSSLSEEGLLLYLRALQTLLPLLPVSEGSSR
PEVTSDSEDDDDAGNNASLKQDDSRISVQLITEECVHKLDTKHQTNTLLNLVWRDSASEE
VFTMMSSICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLISSMTTKMITGSMVPLLQ
LISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGQTQSSMMPFTLTEL
VSLSRCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTAVQLRIQAEQKRWVQLF
KVITNLVKMVKARDIRRPFCPSGHWLSGEVNICADKVTQLYVPSARHVWRTRRMGRIGPL
QSTLDVGLEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFPDG
ISVTIRRNYIYEDAYDKLSPENEPDLKKRVRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SGFNPNQGFFKTTNDSLLYANPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSAEVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVEL
KLGGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGIANVVNLEWLRMFDQQEIQV
LISGALVSICLDDLKNFTNYSGGYSATHPVILIFWEVVDGFTDEEKRKLLRFVTSCSRPP
LLGFKELYPAFCIHNGGDDLARLPTASTCMNLLKLPEFCDQHLMRNKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttgagggagatttcaagacgagacccaatgtatcactgggaggagcgagt
aaaaaggaggagaaagcttctctgctgcaccgcactcaagaagaaagacgaaaaagagag
gatgaaagaaaacgactgaagaattccattatcattcagtcctacatacgtggctaccaa
gacttgaaacgacagtatgccatccagagagcccggtttgacgagtgtgccggccagaca
cagggagggggagctccgcgtggcttggacagtcatgttctttgcctcttatcaagacaa
ctcatatttttctatcgacaaagtgtggatgcacatagattgatatggttgtgccagaac
ctggtgaaacacaacagtcagtttgtgaaactgttggtgggcccacaaagacagacatgt
atatttcagatcaagaggatcttaggcttctgctgcagactcctacagaactgcaaagac
gacagtttaaatgtgacggttcctatgcggatgctagaaatattttcttcagagaaaacc
tatcttcccattattccagatgctaactatgtagcgtcattactcgagcagattttgcac
tatatggtacaaacaggatactacaggtcgctgtatattcttgtgaatcacaggctccct
tccagtctggagtacagtgacgctccctctatccctatggcaagcacactgttggagcac
atcctcaaacctctgcactttacctactcctcctgcacaacaggcgcaaggcagtttgta
tttggagcctttactaaggagttcatctctccgccgttcaccgagcagatctttcacttc
tttatcccggctctgtcggacgtccgtctctcgttcccattcgaggccttcctgagctcc
ctccaggtcaccatgagctcctcctcagcagcacaaagcgaggcgccgtggctgttttac
tttgtcctctcggcaggggagaactgtttaagctctctatcagaggagggtctcctgctg
tacctccgggctctgcagacgctcctcccgctgctgcccgtgtcagagggcagcagcagg
ccggaagttaccagcgactcagaggacgacgatgacgctggcaacaatgcatcactcaag
caggatgacagcagaatctctgtgcagctgatcacagaggagtgtgtccacaagctggac
actaagcatcagactaacaccctgctgaacctggtgtggagggattcggccagcgaggag
gttttcaccatgatgtcatccatctgtcacacactcatggttcagcatcgcctcatggtg
ccaaaagtcagactcctgtacagtttagctttcaatgcacgtttcctgaggcatctctgg
cacctgatcagctccatgacaacaaaaatgatcaccggctccatggtgccgctgctacag
ctgatctcgcgagggtctcccatgtcgttagaggactccaaccgcatcattcccctcttc
tatctcttcagctccctcttcagccactcgctcatctccgtgcacgacagcgagtttttc
ggtcacgaaatggaaggtcagacacagtcctccatgatgcccttcacgctgacggagctg
gtgagtctgtctcgctgtctgagggacgcgtgcctgggaatcatcaagctggcctacccc
gagaccaaaacggagcaccgcgaggagtacatggctgccttccgcagcgtgggtgtcaag
acaaacactgcggttcagctgcggatccaggccgagcagaaacgctgggtacagctcttc
aaggtcatcactaacctggtgaagatggtgaaagctcgcgacattagacgacccttctgt
ccgtcaggtcactggctctctggggaggtcaacatctgcgcagataaggtcactcagctg
tacgtcccctctgcgcgacacgtgtggaggacacgcaggatgggtcgcattgggccactt
cagtcgacacttgatgttggtttagagcctccacagctgtcggtgtctgaagagagacat
ctggccatcctcacagagctcccttttgtggttcccttcgaggagcgagtcaagatcttc
cagaggttaatctacgccgacaaacgggacgtgcagggggacgggccgttccccgacggc
atcagtgtcaccatcagacgcaactacatctatgaagacgcctacgataaactctctcca
gaaaacgaacccgacctgaagaaaagggttcgggtccatctgcttaacgctcacggtctg
gacgaggccggcatcgacggcggcggcatcttccgcgagttcctcaacgagctcctgaag
tcgggcttcaatcctaaccagggcttcttcaagacgaccaacgacagcctgctgtacgcc
aaccccgcggcagagatgctggtcggagactccttcacgaggcattactacttcctgggc
aggatcctcggaaaggcgctgtacgagaacatgctggtggagttgcctttcgccagtttc
ttcctgtccaagctgctgggaaccagcgccgaggtggacatccaccacctggcatcgttg
gacccggagatgtaccgcaacctactcttcctcaagagctacgagggcgacgtggaggag
ctgggcctcaacttcactgtggtcaacaacgatctgggagaggctcaggtggtcgagctg
aagctgggaggcaaagacattcctgtgaccaccgccaaccggatagcctacatccacttg
gtggccgactacaggctgaacaagcagatccggcctcactgcctggccttcagacagggc
atcgccaacgtggtcaacctggagtggctgcgcatgtttgaccagcaggagatccaggtg
ctgatatctggggctcttgtgtcaatttgtcttgatgacctgaagaatttcacaaactac
tcaggcgggtactctgccactcacccagtcatcctgatcttttgggaagtggtcgatggc
ttcacagacgaggagaagcgtaagctgctgaggtttgtcaccagctgctccagacctccc
ctgctcggatttaaggagctttacccggccttctgcatccacaacggcggcgacgacctg
gcgcgcctgcccaccgccagcacgtgcatgaacctgctcaagctcccggagttctgcgac
cagcacctgatgaggaacaagctgttgtacgccatcgagtcctccgccggcttcgagctg
agctga
DBGET
integrated database retrieval system
