KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130206079
Entry
130206079         CDS       T09868                                 
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130206079 (dcaf11)
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     130206079 (dcaf11)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_LRRK2 Beta-prop_IFT140_1st MRP PROPPIN HB_ELP1 Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 130206079
NCBI-ProteinID: XP_056289786
LinkDB
Position
16:complement(15342346..15356590)
AA seq 550 aa
MGSQSSSGMSGGRGSSSGNPAEQPEASEPNQSSSSSSSSSSSSSSSSRGRRTADRQQVDI
QPASEEDVDLAEVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWDGRLGDLYN
PPVDTQPDTHEVDQSEIRTQIMLATGSLTAKSRQSFTHMLTERRQGRCRGSSFSHGECSR
IRTHFLPNYVSHKDTYQQKAFCGVYSEDGSMFLSACQDQNIRLYDTTKGRFHLRQTVKAR
DVGWSVLDVCFTPDGQNVLYSSWSDYIHLCSIDGDSENHTALDLNPDERRFCVFSLAAST
DGNEILGGANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVW
DRRALREDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDIRKFSPKEGLAA
SRLAVTQQNWDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLIRSRFSPEFSTGQKF
IYSGCSTGKIIIYDVLTGAVVSRLSGHDACVRDVSWHPYEDNIVSSSWDGGVRMWEHRQT
HPLEEERERV
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgggctctcagtccagttctgggatgtctggtggaaggggttcttccagtggcaaccca
gctgagcagcctgaagcatctgaaccgaaccagagcagcagtagcagcagtagcagcagc
agtagcagtagcagcagcagccggggccgcaggacggctgacaggcaacaggtggacata
cagccggcatcggaggaggacgttgacttagctgaagtgctggcttacctactgaggagg
ggccaggtccgtctggtccacgggagcggagccacggggctgcagctggtccagtcgtac
tctgactctgatgaggacagcgacggagcctgggatggtcggctgggggacctctacaat
ccaccagtggacacccaacccgacacacacgaggtggaccaaagcgagatccgaactcag
atcatgctggccaccggctccttgaccgcgaagagccgccagagtttcacccacatgcta
acagagaggaggcaaggcagatgtagaggctccagcttttcccatggggagtgcagtcgc
atccgcacacattttctgccgaactatgtatctcacaaggatacgtaccagcagaaagct
ttctgtggggtgtacagcgaggacggcagcatgttcctctccgcctgccaagaccagaac
atccgcttgtacgacaccaccaaggggcgctttcacttacggcagacggtgaaggctcgc
gacgtgggctggagtgttctggacgtctgcttcacccccgacggacaaaacgtgctctac
tccagctggtccgactacattcatttgtgcagtatagacggagacagtgaaaaccacacc
gccctggacctcaatccagatgagaggaggttctgtgtgttctcactggctgcgtccaca
gatggcaatgagatcctgggaggagcgaatgacggctgcctttacgtttttgatcttgag
cagaataaacgaacgttgaagattgatgcccacgaggacgacgtgaatgcggtggcgttc
gccgacagctcgtcccagctgctcttctctggcagcgacgacgcgctgtgcaaggtgtgg
gacagacgggcgctgcgggaggacagaccgcagcctgtcggacagctggccggccaccga
gacggcatcaccttcatccacagcaagggtgacgcacgctatctgatcagcaactcaaag
gaccagtccatcaagctctgggacatcaggaagttctctcccaaggaaggcttggctgct
tcccgcctggccgtcacccagcagaactgggattaccgctggcagcaggttccccagaga
gccttgaagagacacaagctgacaggcgacacctcggtgatgacctaccgtggccacggc
gttctgcacaccctcatccgcagccgcttctctccagagttcagcaccggacagaagttc
atctactccggatgctccactggcaaaatcatcatttatgacgtcctgacgggcgccgtg
gtctccagactgtcgggccatgacgcgtgtgtgagggacgtcagctggcacccatacgag
gacaacatcgtcagcagctcttgggatggaggggtgcgcatgtgggagcaccgacagacc
catccgctggaggaggagagagagcgagtctga

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