Pseudoliparis swirei (Mariana hadal snailfish): 130206123
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Entry
130206123 CDS
T09868
Symbol
zbtb47b
Name
(RefSeq) zinc finger and BTB domain-containing protein 47
KO
K10518
zinc finger and BTB domain-containing protein 47
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130206123 (zbtb47b)
04121 Ubiquitin system [BR:
pswi04121
]
130206123 (zbtb47b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
130206123 (zbtb47b)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130206123 (zbtb47b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
BTB
zf-met
zf-C2H2_jaz
zf-C2H2_6
BTB_KLHL33
zf-Di19
zf-C2HC_2
zf-C2H2_8
DNA_pol_phi
zf-C2H2_11
zf-C2H2_15
zf-MYST
Motif
Other DBs
NCBI-GeneID:
130206123
NCBI-ProteinID:
XP_056289888
LinkDB
All DBs
Position
16:complement(10005412..10034494)
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AA seq
732 aa
AA seq
DB search
MLIVEKTTDFPSAEFSLVEDVALHFTCLMDRLNEQRLFQPDLCDVDIVLVRQHSTFPAHK
GVLAAYSPFFHSLFAQSKRLRRVDLSLDALTSQGLQQILNFIYTSKLLVSSRTVRDVLNA
ATLLQMSDIAASCRELLSSHSLRTTCADMASREGLGGGDPTSVAMPSRQLYPEIKQELAL
GRLYKRDGSSLFSVRVEEAGETASQQKRYYQKEDASGGGAGAVVAALCKVESNGEESKTA
DIHASFSRDQIIVEVNLNNQTLNVSKGPETKPANATDAVAMFDRCRDNERDSEEGEEDEA
EDDDTGEEEDDDELKRGDILGQSSEEEEDEEEEEENTLNIPGLEQPALMDRTRRGARAFA
VAGTTASMQQTLAEAKLANQRQGGKRTLDAEGLCQKVRLEEKQHYPCKKCPRVFNNRWYL
EKHMNVTHNRMQICSNCGKRFLLESELLLHQQTDCEKSIQCVTCGKAFKKLWSLHEHNKI
VHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHS
GEKPFKCENCNERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKP
YICEICGKSFTSRPNMKRHRRTHTGEKPYPCEVCGQRFRFSNMLKAHREKCFRVSNPMVT
DGNDPLGLHQPLASPAVDSSGQAPPASATTPAAASSPHHLHGTQLSLPLLPPTPHLPPPP
PLFSAGRMNSNN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgctcatagtggaaaagaccacagacttcccctctgctgagttctccctggtggaggat
gtggctctccacttcacctgtctgatggacaggctgaacgagcagcgcctcttccagcct
gacctgtgtgacgtcgacatcgttctggtgcgtcagcacagcaccttcccagcccacaag
ggcgtgctggcggcctacagccctttcttccactccctttttgcacaaagcaaacggctg
cggcgagtggacctgtcgctggacgctctgacctcgcagggcctgcagcaaatcctcaac
ttcatttacacttccaaactgctggtgagcagccgcaccgtccgcgacgtgctcaacgca
gctaccctgcttcagatgagcgacatcgcggcctcctgccgcgaactcctcagcagccac
tcgctgaggaccacctgcgcagatatggccagccgggaagggctcggtggcggtgaccca
acttcggtggcgatgccttccagacagctgtacccggagatcaaacaggagttggcgctg
gggaggttgtacaagagggacggcagcagcctgttctctgtgagagtggaggaggcgggc
gagacggcctcccaacagaagcggtattaccagaaggaggacgcgtcagggggcggggcc
ggcgcagtggtggccgcgctctgcaaagtcgagagcaacggagaagagtcaaagaccgcg
gacatccacgcctccttcagcagagaccagatcattgtggaagtcaacctcaacaaccag
acccttaacgtgtccaaggggccggagaccaagccggcaaacgccacagatgcggtcgcc
atgtttgatcgttgccgcgacaacgagagggattccgaagaaggcgaggaggacgaggcg
gaggatgacgacactggtgaagaagaggacgacgatgagctgaagaggggggacatactg
ggacagagcagcgaggaggaagaagatgaggaagaagaggaggagaacactctaaacatt
ccaggcttggagcagccggccctgatggatcgaactcgccggggcgccagagcctttgcc
gttgcgggcaccaccgcctccatgcagcagacactggcagaggccaagctggccaaccag
cggcagggcgggaagaggacgctggatgcagagggcctgtgccagaaagtgaggctggag
gagaagcaacattatccatgtaagaaatgccctcgtgtcttcaacaaccgctggtacctg
gaaaaacacatgaacgttactcacaaccgcatgcagatctgcagtaactgtgggaaacgc
ttccttctggagagcgagctgctgctgcaccaacagaccgactgtgagaagagcatccag
tgtgtaacatgtggcaaggccttcaaaaagctgtggtcgttacacgagcataacaaaatc
gtccacggctacgccgagaagaagttctcctgcgagatctgcgagaagaagttttacacc
atggctcatgtcaggaagcacatggtcgctcatacgaaggacatgccgttcacctgtgag
acgtgcgggaagtcgttcaagcgcagcatgtccctgaaggttcactctctgcagcactct
ggggagaaacccttcaagtgtgagaactgcaatgagcgcttccagtacaaataccagctg
cgatcccacatgagcatccacatcggacacaagcagttcatgtgccagtggtgcggaaag
gacttcaacatgaaacagtactttgacgaacacatgaagacacacactggagagaagccg
tacatctgtgagatctgtgggaagagcttcacgagccggcccaacatgaagcgccaccgc
cgcacccacaccggggagaagccgtacccttgcgaggtgtgcggccagcgcttccgcttc
tccaacatgctcaaggcccacagggagaaatgcttccgcgtcagcaaccccatggtgacc
gacggcaacgaccccctcggcctccatcagcctctggcctcgcccgccgtggactcttcc
ggccaggcgccgcccgcgtctgcgaccacacccgctgctgcttctagcccgcaccacctc
catggcacccagctgtctcttcccctgctgcctcccactcctcatttacccccaccgcct
cccctgttctctgccggtaggatgaactccaacaactaa
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