Pseudoliparis swirei (Mariana hadal snailfish): 130206136
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Entry
130206136 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206136
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Others
Others
130206136
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130206136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PDZ
PH
PH_9
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130206136
NCBI-ProteinID:
XP_056289912
LinkDB
All DBs
Position
16:complement(5155371..5200997)
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AA seq
1990 aa
AA seq
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MLAQRSGLPPGRTPAPLKDRPDPRDAGDAKGCCSLSPSPSAGGCPWARLAGLDGCLSEPY
CLWFRLLARAYWGELEPGLTGPHRGASWARLRDASRKNCLRSRAKQKDGRDQSEASAVPS
PGAEEEPFSWPGPKTLHLRRTSQGFGFTLRHFIVYPPESAVHNSLKDEDNGSRGRQRNRL
EPMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCVM
PKDEDILQLFSRDITALAYSQDAYLKGNDAYSGNAQNIPEPPPICYPRIEVKAAGMAQAS
EPAATAAFVETPPEPDQGPARRGGAVEKSYRVEIPVPPSPPPQQSQTAVCVCGETARTAA
MPPDPVDRGSRVARAGPSHRTEENRYSPSADSGSARPRPLIPSVPGGAQLQYPSSRPTES
PVNSPSSRPGPIYPDSLSPAVRSAAASPDTFSSAISPSANRYSPSPTAPSTSPHQNIDWK
TYTTYKDYIDAKRLHTYGCRTIQERLDSLRAAANSSSAYAQQRTPPPPSSSQRGALGSQV
RRRSTSNDRGGGVEKGAAATPLRSVSQERLGAERTTADRNWPRSASEDALPFSGVAGVPE
PRARSCDYLGQRSGDAGGGSAVFGDRVALEDGLLLCRGEEARASRQGTGPRASPRLNRSL
HGQERDGRGGGLSNSAPAFTRFTTDSNAITSRTDGVVMRPSRLPVNHSVSDPSTASPSSR
PTDPLKDQRANAAGNRPSHSSPLHLLLRGRADSLKMESRSEAGLAARSSSCSGTSSKLQS
VVVAASPRASSAANGAVTQKPKARGLSSSTSALVRTNGGFAAGVEGPDATVVVLRRDKNS
GPPHVRPPSYVLAVNDNQGAGTREPPPLVKAGSADGAMCWTSDGGGFREARPRRLGDARQ
KSGSDNLDDSLDSIPFIDEPSSLGTDPDSAHVLASAVVCGAPIVITTVPPSPASLSPLLR
RHMSHDQDSLRLTIIESDSGTKTERSKSCDEGLDNYWGEVIAGPLIPGLKSLRKAVDRSS
EDSGSRRNSSSGVFCDAVREGLLHFKQLNTDKSKRVGGGGGMRPWKQMYAVLRGRYLCLY
KDRKEGRAHASRHAVDEPLPIGIKACLVDISYSDTKRKNVLRLTTADCEFLFQAEDRHDM
LAWIRVIQESSNLDEENAAFTSHDLISRKIKEYNTLMSPAGSKAEASPKSSRIRQTLLGG
KGETRASSALTLKPEQERRNTHKDDTSPPKDKGMWRKGLPGLMRKPFERKPSPAVTFGVR
LDDCPPAHTNKFVPLIVELCCKLVEDRGLEYTGIYRVPGNNAAISNMQEELNNKGMHDID
IQDDKWRDLNVISSLLKSFFXKLPEPLFTNDRYADFIDGNRTQDPVERLKVLKRLLHELP
DHHYETLKFLSAHLKTVADNSEKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMPDQYRI
VEALIQNYEWFFTDDGNGDPVTISRQESAVESQPVPNIDHLLTNIGRTATSQGEVSDSQT
SDSAKSKGSWGSKDRELLVSSIFAAASRKRKKSKEKPPPSSSDDDLMEAAAPGQKANHHE
ARGEARPGLLLHAEPPAEERQENGRAPEVTPNAKREHRKEPPPPPSPDRTAAKPSPPDAP
SPRTDDNTSDLGTMSSGASAPRSRPKKWSGAEVSSVTSDYSTTSSVTFLAGALSPEPHGG
EEADDERSELLGEGRPAETDSESDDPVFAPGGGRSTPRGETAEVGGAAAAKLEARRLFPS
QRRIEGDALSGRRALRQKTDSESSAEGVAGGEAAAAESSTRLSRVLEVMKKGRSTGSLSS
SSRSESERPEPPGAAVWHLKITERLKSKLRSSADDMFAQKSRGGGRKKNIRRRHTLAGQR
DFAELAVANDWRRLGGADPTAEPSALDRLKPRCSSQDVSIRDWISRERHNGSDSGAEAAP
RAVPEEARPAAPEGPPPPPPLPPPSSPPAGEHVNGGGPQGKNNKAGVGAEPHPNKLSAAH
VVRSRFYQYL
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccagaggagcgggctcccgccgggccgcacgccggcgcccctgaaggaccgc
ccggacccgcgggacgccggcgacgccaaagggtgctgctccctctccccctccccgtcg
gcgggcgggtgcccctgggctcggctggccgggctggacggctgcctgtcggagccgtac
tgcctctggttccggctgctggcccgagcctactggggagagctggagccggggctcacc
gggccccaccggggcgcgtcctgggcccggctcagggacgcctccaggaagaactgcctc
cgctcgcgggccaagcagaaggatgggcgcgatcagagcgaggcgtcggccgtgccttcc
cccggggcggaggaggagcctttctcctggccggggcccaagacgcttcacctgcgccga
acctcccagggcttcggcttcacgctgcgacacttcatcgtctacccgccggagtccgcc
gtccacaactctctgaaggatgaagacaacggcagtcgagggcgacagcggaaccggctc
gagccaatggacaccatcttcgtcaagcaggtgaaagagggaggccccgcccacggagct
ggactctgtacaggggaccggatagtgaaggtgaacggagagagcatcatcgggaagacc
tactcgcaagtcatcgctctgatccagaacagcgatgcctcactggaactctgtgtgatg
ccaaaggatgaggacatcttgcagctgttctccagggatatcactgctctggcgtattcc
caggatgcatatctcaaaggaaatgatgcgtacagcggaaatgcccagaacatccccgag
ccccctcccatatgctaccctcggatagaagttaaggccgcgggcatggctcaggcatcg
gagcccgccgccaccgccgcattcgttgagacgcccccagagccggatcagggaccggca
agaagagggggggccgtggaaaagagctaccgggttgaaatccctgttccgccatctccc
ccgccccaacagtctcagacagcggtttgtgtctgtggtgagactgcgaggacagcggca
atgcctcctgatccagttgatagggggtcccgggtggcccgggccggaccaagccacagg
acagaggaaaaccggtacagtccttcggcagattccggctcagcgagaccgagacctctt
attccctcggtacctgggggcgcgcagttgcagtacccctcttcccgtcccacagaaagc
ccagtcaactccccctcgtcgagacctggccctatctatccggactcattgtctccggct
gtgcggtccgccgccgcctcgccggacacgttctccagcgccatctcacccagcgccaac
cgctactcgccctctcccacggcgccctccacctctccgcaccagaacatcgactggaag
acctacaccacctacaaggactacatcgacgccaagaggctgcacacgtatggttgccgc
accatccaggagcgcctggacagcttgcgcgcggctgccaattccagctccgcctacgcc
cagcaacgcacgccgcctcctcccagctccagtcaaaggggggcactgggctcccaggtc
agacggagaagcacctcgaacgaccgcggcggcggcgtggagaagggcgccgcggcgact
ccgttacgcagcgtctcccaagagaggctcggggcggagaggaccacggcggacaggaat
tggccccggagcgcgtccgaggacgccctgcctttctccggcgtcgccggagtccccgaa
cctcgggcgcggtcttgcgactacctgggccagcggtccggagacgccgggggggggtcg
gccgtcttcggagaccgggtggcgttggaggacggcttgctgctgtgtcggggagaggaa
gccagagccagccggcagggaacgggcccgagggcgtcgcctcgtctgaacaggagtctc
cacggacaggagcgcgacgggcgaggaggcggactgtccaactctgctcccgcgtttacg
agattcacgacggactccaacgcgatcacgtcgcggaccgacggcgtcgtaatgagaccg
tcgcgcctgcccgtcaaccactccgtctcggacccttcgaccgcctcaccctcctctcga
cccacggaccctctcaaagaccaacgagccaacgcggcgggcaaccgcccgagccactcg
tcccctctgcacctgctgctccgaggccgggccgacagcctgaaaatggagagcaggtcg
gaggccgggttggcggccaggtcctcctcttgctccggtacctcctccaaactgcagagc
gtggtcgtcgctgcctctccccgtgcttcctccgccgccaatggagccgtcacccaaaag
ccaaaagccagaggactgtccagttccaccagcgccctcgtacggactaacggcggtttt
gcggcgggcgtggaaggaccggacgcgacggtcgtcgtcctaagaagggacaagaactcc
gggccgccccacgtccgccctccgtcctacgtgctcgccgttaacgacaaccagggagcg
gggactcgcgagccgccgccgttggtgaaggccggctccgcagacggagccatgtgctgg
acgtccgacggcggcggcttcagggaggcccgtccgagaagactcggggacgcgcgacag
aagtcgggctccgacaacttggacgactccctggattcgatccccttcatagacgagccg
tcgagtctcggcaccgacccggacagcgcacacgtcctcgcctccgccgtcgtatgcgga
gcgcccatcgtcatcaccacggtgccgcccagccccgcctctctgtccccgctcctccga
cgccacatgtcacatgaccaagattctctccgtctcacaattatcgagtcagattctggt
accaaaaccgagcggtccaagtcgtgtgacgaaggcctggataactactggggagaggtc
atcgcggggcctttgatcccgggcctgaagagtctgaggaaggcggtggaccggtcctct
gaagactcggggtccaggaggaactcgtcctccggcgtgttctgcgacgccgtccgggag
ggactgctgcacttcaagcagctgaacacggacaagagcaagcgcgtcgggggagggggg
ggcatgcgcccgtggaagcagatgtacgccgtgctgcgcggccgctacctctgcctctac
aaggacaggaaggaggggcgggcgcacgccagccgccacgcggtggacgagccgctgccc
atcggcatcaaggcgtgcctcgtcgacatctcctacagcgacaccaagcgcaagaacgtg
ctgcgcctcaccaccgcggactgcgagttcctgttccaggccgaggaccgccacgacatg
ctggcctggatccgggtcatccaggagagcagcaacctggacgaggagaacgcggccttc
accagccacgacctcatcagcaggaagatcaaggagtacaacaccttgatgagtccggcg
ggcagcaaggcggaggcgtcgcccaaatcctcgcgcatcagacagacgctgctgggcggg
aaaggagagacgagggcgtcgagcgccctcacgctcaaaccggagcaggagaggaggaac
acgcacaaagatgacaccagcccgcccaaggacaaaggcatgtggaggaaggggctcccg
gggctgatgaggaaacccttcgagaggaagccgtcccctgcagtgacgttcggcgtgagg
ctggacgactgcccccccgctcacaccaacaagttcgtgcccctgatcgtggagctgtgc
tgtaaactggtggaggaccgcgggttggagtacacgggcatctaccgggtccccgggaac
aacgccgccatctccaacatgcaggaggagctcaacaacaagggcatgcacgacatcgac
atccaggacgacaaatggagggacctcaacgtgatcagcagtttgctcaagtccttcttc
ncgaaacttccagagccgctgttcaccaacgatcggtacgcagactttatagacggcaac
cgaacccaggacccagtggagagactcaaagtgctcaagaggctgcttcacgagttgccc
gaccatcattacgaaaccctcaagttcctctcggctcatctcaaaactgtggctgacaac
tctgagaagaataagatggaaccgaggaacctggccatcgtgttcggccccactctggtg
cgcaccaccgaggacaacatgacccacatggtgacccacatgcccgaccagtaccggata
gtggaggccctcattcagaattacgagtggttcttcaccgacgatggaaacggagatcca
gtgactatatctcgccaggagagcgcggtggagtctcagccggtgcccaacatcgaccac
ctgctcaccaacatcggccgcacggccacgtcgcagggcgaagtatcagattcacagact
agtgactcggctaaatcaaagggttcctggggctcgaaggaccgagagctgctggtctcc
tccatctttgctgccgccagccgcaaaagaaagaagtccaaggagaagccgccgcccagc
agctcagacgatgacctgatggaggccgccgcccccggccagaaggccaaccaccacgag
gcccggggcgaggcccggcccggcctcctcctccacgccgagccgccggcggaggagagg
caggagaacgggagggcgccggaggtcacgccgaacgccaagcgggagcacaggaaggag
ccgccgccgccgccgagccccgaccggaccgcggcgaagccgtctccgccggacgccccg
tcgccccggacggacgacaacacctccgacctcgggaccatgagctccggggcgtcggcg
ccgcggtcgaggccgaagaagtggagcggcgccgaggtgagctccgtcacctcggactac
tccaccacgtcgtccgtcacgttcctcgccggcgccctgagcccggagccgcacggcggc
gaggaggcggacgacgagcgcagcgagctgctcggcgagggccggccggcggagacggac
agcgagagcgacgacccggtgttcgcgccgggcggcggccggtcgacgccgcgcggcgag
accgccgaggtcggcggggcggcggccgcgaagctggaggcgcggcgcctcttcccgtcg
cagcggaggatcgagggcgacgccctctccgggcgccgggcactccggcagaagaccgac
agcgagtcgtcggcggagggcgtcgccgggggcgaggcggcggcggcggagtcgtccacg
cggctctcccgggtcctggaggtgatgaagaaggggcggtccaccggcagcctgagctcg
tcttcgcgcagcgagtcggagcgacccgagccgcccggcgccgccgtctggcacctcaag
atcacggagcgcctcaagtccaagttgcgctcctccgccgacgacatgttcgcccagaag
agccgcggcggcggcaggaagaagaacatccggcgccgccacaccctggccggccagagg
gacttcgccgagctggcggtcgccaacgactggcggcggctcggcggcgccgacccgacc
gccgagccgtcggctctggaccgcctgaagccgcgctgctcctcccaggacgtctccatc
cgggactggatcagcagggagcgccacaacggctccgactcgggcgcggaagcggcgccg
agagccgtccccgaggaggcccgcccggcggctcccgagggtccgcctcctcctcctcct
cttcctcctccttcttcgccgcccgcgggggagcacgtcaacggcggcgggccgcaaggc
aagaacaacaaagccggcgtgggggcggagcctcaccccaacaaactgtccgcggcgcac
gtggtccgctcgcggttctaccagtatctgtga
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