Pseudoliparis swirei (Mariana hadal snailfish): 130206171
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Entry
130206171 CDS
T09868
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03030
DNA replication
pswi03410
Base excision repair
pswi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130206171 (fen1)
03410 Base excision repair
130206171 (fen1)
03450 Non-homologous end-joining
130206171 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130206171 (fen1)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130206171 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130206171 (fen1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
130206171 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
130206171 (fen1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
130206171 (fen1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130206171 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
130206171
NCBI-ProteinID:
XP_056289975
LinkDB
All DBs
Position
16:15293508..15298683
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEYGIKPVYVFDGKPPQLKSAELEKRGERRAEAEKMLAQAQELGEQ
ENIDKFSKRLVKVTKHHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHVTASEAKKLPIQEFHYNRILEDIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDPKKHPAPEDWLYKEARRLFLKAEVVDCSTVELKWSE
PDEEALIQFMCNEKQFSEDRIRNGCKKILKSRQGSTQGRLDSFFSITGSLSSKRKEPELK
GSAKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacatggacttgccaagctgattgctgatcaggcccctggtgccatcaaagag
caagacatcaagaactactttggcaggaaaattgccatagatgcctccatgtgtatctac
cagttcctgattgcagtgcgacaggacggtaacgttctgcagaatgaggatggcgagacg
acgagccacctgatgggaatgttctaccggacgatccgcatgctggagtatggcatcaaa
cctgtgtacgtctttgacggcaagcccccacagctcaagtcagcagagctggagaagaga
ggggagaggagggcagaggctgagaagatgcttgctcaagctcaggaactcggggaacaa
gagaatattgacaaattctccaagcgtctggttaaagttaccaagcaccacaatgacgag
tgcaagaagctgctgaccctgatgggagtgccctacgttgaggctccatgtgaggcagag
gccagctgtgccgctctggttaaagccgggaaggtcttcgccacggcaacagaggacatg
gatggactgacctttgggacaaatgtcctgctgagacacgtcaccgccagcgaagcaaag
aaacttcccatccaagagttccactacaatcgcatcctggaggacatcggcctgaccaat
gagcagttcatcgacctgtgtattctgctgggctgcgactactgtggcaccatcaaggga
attggccccaagagagccatcgacctgatcaaacaacatggctccatcgaggagatcctc
gagaacattgaccccaaaaagcaccccgctccagaggactggctgtacaaagaggccagg
cgtttgtttttgaaggcggaagtggtggattgttccactgtggagttgaagtggagtgag
ccggatgaggaggcgctgatccagttcatgtgtaacgagaaacagttcagtgaggacagg
atacgtaacggctgtaagaagattctgaagagccgacagggcagcacacagggccgactg
gactctttcttctccatcactggatctctatcctccaaacgcaaggaacctgagctcaaa
ggatcagccaaaaagaagcagaagacgggagccacgccgggcaaatttaagaaggggaaa
tag
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integrated database retrieval system
