Pseudoliparis swirei (Mariana hadal snailfish): 130206172
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Entry
130206172 CDS
T09868
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi02010
ABC transporters
pswi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130206172 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130206172 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130206172 (abcd3a)
Enzymes [BR:
pswi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
130206172 (abcd3a)
Transporters [BR:
pswi02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
130206172 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
BrxL_ATPase
AAA_21
Rad17
AAA_29
AAA_27
nSTAND1
AAA_16
Motif
Other DBs
NCBI-GeneID:
130206172
NCBI-ProteinID:
XP_056289976
LinkDB
All DBs
Position
16:complement(24291170..24310301)
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AA seq
654 aa
AA seq
DB search
MATFSKYVTAKNSSIAGGMLLVLYLLKRRRRTNHKEGRKGASDKALNTVKDGKKDHAVVD
GEFVHQILQIVRIMVPQFFCKETGYLLLIAAMLVTRTYCDVWMIQNGTMIESAIIGRSTK
DFKATLFSFIKFMPLIALVNNFLKLGLFELKLRFRERLTKNLYDQYLQGFTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIALYTFKLTSAIGAQGPGAMMSYLVIS
GLILTRLRRPIGKMTVMEQRYEGEYRFVNSRLITNSEEIAFYNGNLREKQTIYATFKKLV
DHLHHFIFFRFSMGFVDSVIAKYLATVVGYIVVSRPFLTPSHPRHLHSTQSDLLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTSRITELMKVLKELNAGKYERTMVTQQKKEKMV
LVPGSGRVINRDNIIKFEHVPLSTPNGDVLIKDLTFEVRSGTNVLVCGPNGCGKSSLFRV
LGELWPLFGGSLTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTHEQQQRKGISDQVLKEY
LDNVQLGHILEREATWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDV
EDFIYSHCRTVGITLFTVSHRKSLWKHHEFYLHMDGRGNYEFKPITEETVEFGS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcagtaaatatgtgacggcgaaaaactcctccatagcgggcggtatgttg
ctggttttatacttactgaaacgtagaagacggacgaaccacaaagaaggtcgtaaagga
gcctcagataaagcactgaacactgtaaaagatggcaaaaaagaccacgcagtggtggac
ggtgagttcgtccaccaaatcctccagatcgtgcggatcatggtgcctcaattcttctgc
aaagagaccggctacctcctcttgatcgccgccatgctggtgaccagaacctactgcgac
gtctggatgatccagaacggcaccatgatcgaaagtgcgattatcggtcgctcgacaaaa
gatttcaaggccaccttgttcagctttatcaaattcatgccacttatcgccttggtgaac
aacttcctgaagttgggtctcttcgagctgaagctgaggttccgtgagcggctcacgaag
aacctgtacgaccagtacctgcaaggtttcacctactacaaaatgggaaacctggacaac
cggatagccaacgcagaccagctgctcacacaggacgtggagaagttctgcaacagtgtg
gtggacctctactccaacctcagcaagccgctgctggacatcgctctgtacacctttaag
ctgaccagtgccatcggtgctcagggcccgggcgccatgatgagctaccttgtgatctcg
ggactcatcctcacccgactgaggaggcccatcggcaagatgacggtcatggagcagcgg
tacgagggcgagtaccgcttcgtcaactctcgcctcatcaccaacagtgaggagatcgca
ttctacaatggaaacctcagggaaaagcagaccatctacgccaccttcaagaaactggtg
gaccacctgcatcacttcatcttctttcgcttctctatgggatttgtggacagcgtcatc
gccaagtacctggccaccgtggtgggctacattgtggtcagccggcccttcctcaccccg
tcacacccccgacacctgcacagcacgcagtctgacctgctggaggactactaccagagc
gggaggatgctcctcaggatgtctcaggcgttgggccggatcgtactggccggccgggag
atgacccgtctctcaggattcacgtctcgcatcacagaactcatgaaggttctgaaggag
ctgaacgccggaaaatacgaacgcaccatggtgacccagcagaagaaagagaagatggtg
cttgttcctgggagcggtcgcgtgatcaacagagacaacatcatcaaatttgaacacgtg
cccctatcaacgcccaacggagacgtgttgatcaaagacctcaccttcgaggtgaggtcc
ggcaccaacgttctggtgtgcggcccaaacggctgtgggaagagctccttgttcagggtg
ctcggagagctgtggcctctgtttggaggaagcctgacgaagcctgagagggggaagctc
ttctatgttccacagcggccgtacatgacgctcggctcgctgagggaccaggtcatctac
cccgacacgcacgagcagcagcagaggaagggcatctctgaccaggtgttgaaggagtac
ctggacaacgtgcagctgggtcacatcctggagcgcgaggccacctgggactcggtccag
gactggatggatgtcctgagtggaggagagaagcagaggatggcgatggcccgtctgttc
taccacaagccccagtttgccatcctggacgagtgcaccagcgccgtgagcgtagatgtg
gaggacttcatctacagccactgcaggacggtgggcatcaccttgttcaccgtgtcccac
aggaagtctctgtggaagcaccacgagttttatctgcacatggacgggagaggaaactac
gagttcaagcccatcacggaggagacggtggagtttggatcataa
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