Pseudoliparis swirei (Mariana hadal snailfish): 130206261
Help
Entry
130206261 CDS
T09868
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
pswi04510
Focal adhesion
pswi04512
ECM-receptor interaction
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04518
Integrin signaling
pswi04810
Regulation of actin cytoskeleton
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130206261 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
130206261 (itga6a)
04518 Integrin signaling
130206261 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130206261 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130206261 (itga6a)
04810 Regulation of actin cytoskeleton
130206261 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130206261 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130206261 (itga6a)
04515 Cell adhesion molecules [BR:
pswi04515
]
130206261 (itga6a)
04090 CD molecules [BR:
pswi04090
]
130206261 (itga6a)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130206261 (itga6a)
Exosomal proteins of breast milk
130206261 (itga6a)
Cell adhesion molecules [BR:
pswi04515
]
Integrins
Integrin alpha subunits
130206261 (itga6a)
CD molecules [BR:
pswi04090
]
Proteins
130206261 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
HCO3_cotransp
Motif
Other DBs
NCBI-GeneID:
130206261
NCBI-ProteinID:
XP_056290120
LinkDB
All DBs
Position
2:complement(10024079..10046949)
Genome browser
AA seq
1092 aa
AA seq
DB search
MLLPLLLPGRPSAVYVALLFYSHLLEPTWVLAFNLDTSHVIRKDGEPGSLFGFSLAMHRQ
LNPDKRMLLIGAPRARALGKQTANITGGLYKCEITHSNECERIEFDSEEDIQVENKENQW
MGVTVQSQGPGGKIVTCAHRYQRRMFVNTPLEYRDITGRCYVLSQDLTIDSLSDEDGGNW
NFCKGRPRGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLIEMGVY
DDGPYEVGDEHLLSPDLVPVPANSYLGFSLDSGHSITRYRGLTVVAGAPRANHSGAVVLL
KKESDASSRLLVEHTLLGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFYMKDGDVGGAV
YVYINQAGRWERITPVRLNGTKDSMFGLAVKNIGDINQDSYEDIAVGAPYDDGGAGKVYI
YHGSAQGIKTSPAQILSGKEHNMRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRARP
VISIRRDVNISPQEIDLTIKTCGSSICFTVDACFTWKANTASYNPRLTIGYSVEADADRR
KQGLTSRVTFLNKSRPETDYQLNGTLDLRGQNQKSCIKITARLKDNIKDKMRSIPIEVSA
EIVGTKRQKTRNGLSQLMPILDSSQPSKDVIEVNFVKEGCGSDHICRSNLKMEYKLYYKQ
SNLDVYSPLPINKNVPVFHLNYERKDLALRVTVDNMNEDDAYEAKLVGTFPDTLSYSGVR
SHQTTLEKPIICTANQNGSQADCELGNPFKRDSKATFYIILSTVGVTLDTTEIDIDLQLQ
TTSVQENIALVKVKAKIIIELPLSVSGEAIPNQVSFGGVVKGESAMKTEEEIGSLITYTF
RINNLWKTSVKASLHIQWPKWNKDGKWLLYLVKITSTGPEDVLCSPESEINSLKHIQDVS
AFRAKREIGERKIVRKMSSLSDKKNVLTCDSQIKCVVLKCPLQGLDGTALELRSRLWNST
FIEDFASISNVHIVVKASLVLHTQFKNMMLRTPHTDVTVSVSPEGAVAQHSGVPWWIILV
AVLAGILILSLLVFLLWKCGFFKRSKQEDSVPSYHAVRIRKDTLENKDGKVQLDPFEKKQ
WTTNWMDGESYS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgctgctgctgccgggaagaccctctgccgtttatgttgcacttttattt
tattctcatcttctggagccaacgtgggtgctcgcgttcaaccttgacaccagtcacgta
atcaggaaagacggagaaccggggagtctgttcgggttctccctcgccatgcaccggcag
ctcaacccggataaacgaatgctattgattggagcacccagagccagagctttgggaaaa
cagacagccaacatcacgggaggcctctataaatgtgaaatcacacactccaacgagtgt
gagcggattgagtttgatagtgaagaggacatccaagttgagaacaaggagaaccagtgg
atgggggtgacggttcagagccaggggcccgggggaaagatcgtgacttgtgctcatcgc
tatcagaggcgcatgttcgtgaacacgcctctggagtaccgggacatcaccgggcgctgt
tacgtcctgagccaggacctgaccatcgactcgctgtcggatgaggacggagggaactgg
aacttctgtaagggccgacccagaggccatgagatgtttgggtcttgccagcagggtttg
gctgccaccttcaccaaagactaccattacgtggtgtttggagcaccaggagcttacaac
tggaaaggcatcgttcgagtggagcaaaagaacaacactttgatagagatgggagtgtat
gatgacggcccgtatgaagttggagatgagcatcttttgagccccgatcttgtgcctgta
cctgccaacagctacctcggattctccctcgattcgggacacagcatcaccaggtaccgt
ggcctcacagtggtggctggagcacccagagccaatcacagtggagctgtggtcctgttg
aagaaagagagcgacgcctcctccagacttttggtggagcacactctgctcgggccgggc
ctcgcgtcctcgtttggctacgacgtggctgtggttgacttgaatggtgacggatggcaa
gacatcgtcgtgggagcccctcagttctacatgaaggacggagacgttggaggagccgtg
tacgtctacatcaatcaggcaggaaggtgggaaagaatcacacccgttcgtttaaatggg
accaaagactccatgtttggcctggcagtgaaaaacattggagacatcaatcaagactca
tatgaagacattgccgtcggagctccttatgacgatggcggtgcaggaaaagtctacatt
tatcacggctctgcgcaaggaatcaaaaccagcccagcgcagatcctttcaggaaaggag
cacaacatgcgactcttcggatattctctggccgggaacatggacttggacagtaactct
tatccagacgtggctgtgggctctctgtcggacacagccctgatctacagggcacggcca
gtcatcagcatcaggagagacgtcaacatatctccacaggaaatagaccttacaatcaaa
acctgtggtagcagcatttgcttcacggtggacgcgtgcttcacctggaaagcaaacact
gcatcttacaaccccagactaactatcggctactcggtcgaagcggacgcagatcgcagg
aaacaggggctgacctccagagtgacgttcctcaacaaatcccgccctgaaacagactat
cagttaaatggcactttggacctccgagggcaaaaccagaagtcatgcatcaagattaca
gccagactaaaagacaacattaaggacaagatgcgcagcatccccattgaggtgtcggca
gaaattgtgggaactaaacgacagaagacgaggaacggcctgtcgcaactcatgcccata
ttagactcctctcaaccaagcaaagacgtcattgaggtcaactttgtgaaagagggatgt
ggaagtgatcatatttgccggagtaacctgaagatggagtacaaattatactacaaacaa
agcaacctcgacgtgtactccccactgcccatcaataagaacgtcccggtgttccatctg
aattacgagaggaaggacttggctctgcgtgtgacagtcgacaacatgaatgaagatgat
gcgtacgaggcgaagctggtggggacgttcccagatacgctgtcttattctggagtgcgc
tcacatcagacaacgttggaaaagccaatcatctgtacagccaatcagaacggctctcaa
gcggactgtgagctggggaaccctttcaagagagactcaaaggctacattttacatcatc
ctgagcactgtgggcgtgaccctcgacaccacggagattgacatcgacctgcagctccaa
acaacaagtgtgcaagaaaatatcgccctcgttaaagtgaaggctaaaataatcattgaa
ctgccgttgtcggtcagtggagaagccatccctaatcaggtttcttttggaggcgttgtg
aaaggtgaaagtgccatgaagacagaagaagagataggaagtttgattacatatacattc
agaataaacaacttgtggaagacttctgtcaaagcctcacttcacattcagtggcccaaa
tggaacaaagatggcaaatggctcctgtacctggtaaagatcacgtccacaggcccggag
gacgtcctctgctctcctgagtctgaaatcaactctctcaaacacatccaggatgtctct
gcgttcagggcaaaacgggagattggagaaagaaaaattgtccgcaaaatgtcatcactg
tcagacaagaagaacgtgttgacgtgtgacagtcagatcaaatgtgtggtgctcaagtgc
cccctacagggcctggacggtaccgcactggaactgaggtctcgtctgtggaactcgacc
tttattgaggattttgcctctatctcaaacgtgcacattgttgtgaaggcctccctcgtc
ctccatactcagttcaagaacatgatgctgagaacccctcacactgacgtgacagtgtcc
gtgtcccccgagggtgcagtagcgcagcacagtggagttccctggtggatcatcctggtc
gctgtgctggcaggcatcttgattttgtctctgttggtgtttctgctctggaagtgtgga
ttctttaaacgctccaaacaagaggacagcgtcccaagttaccacgcagtgcggatcaga
aaggacactcttgagaataaagatggaaaagtccagcttgatccttttgaaaagaagcag
tggacgacaaattggatggacggtgaaagttactcatga
DBGET
integrated database retrieval system
