Pseudoliparis swirei (Mariana hadal snailfish): 130206294
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Entry
130206294 CDS
T09868
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130206294 (hoxd3a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130206294 (hoxd3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130206294
NCBI-ProteinID:
XP_056290177
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All DBs
Position
2:complement(9573570..9589266)
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AA seq
403 aa
AA seq
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MQKATYYDNSGLFGGYTFPKPDPYNYGPSHQPYAASSIENDYQDSVCPTQSPAVRPPTLK
DSDLNGDCMRQSSSQSNSSIQAPSIVEQQAPPLSASSPSSNSSAPQKKKSPPSSASSTAT
PTLTKQIFPWMKETRQNSKQKGNNCTSAGSDHDGGELSDEKSPPGPASKRVRTAYTSAQL
VELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGLAHSPLGHS
PDRSPPLSGPNHIGYSGQLQNVNSLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQK
RYPGPEYEHHGMQSNGSFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSTSVDY
SCAAQIPGNHHHGPCDPHPTYTDLTSHQASQGRIQEAPKLTHL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcaacatactacgataactctggactttttggaggctacaccttccccaaa
ccagacccttacaactacggcccctctcatcagccctacgctgcttctagcattgagaat
gactaccaggactcggtgtgtcccacccagtcccctgctgtccggccgccaaccctcaaa
gacagtgacctgaacggcgactgcatgcgacaaagcagcagtcaaagcaacagcagcatc
caagctccgagtattgtggagcagcaggcacctccactgtctgcatcctctcccagctcc
aacagctctgcaccccagaagaagaaatcccctcccagcagcgcctccagtaccgccacc
ccaacccttacaaagcagatattcccctggatgaaggagacccggcagaactcaaagcag
aagggcaacaactgcaccagtgcaggtagtgatcatgatggtggcgagttgagtgacgag
aagagcccaccaggaccagcgtccaaacgagtcagaactgcttacaccagcgcacaactt
gtggagctggagaaggagtttcactttaaccgctatctgtgtcgccctcggagagtggaa
atggcaaatctgttgaatctcaccgagcgtcaaataaagatctggtttcaaaacaggagg
atgaaatacaaaaaggaccagaagtctaaagggctcgcacactctcccctgggacactcc
ccggatagaagcccgccgctgagtggcccaaatcacattggatactctggccagctccaa
aacgtgaacagcctcagctatgacgcgccctcgcccccgtccttcgccaagccccagcaa
aacatgtacgggttggcggcgtacacggcacccttgggtggctgcatcccgcaacagaag
aggtaccctggccccgaatacgagcaccacggcatgcagagcaacggcagctttgccaac
gccaatttgcaaggtagccccgtttatgtgggtgggaactttgttgattccatgccagcc
tctggccccatgttcaacctcggccaccttccccacccctcatccaccagtgtggactac
agctgtgccgctcagatcccaggaaaccaccatcatggaccctgtgatccccatcccaca
tacacagacctcacctctcatcaagcgtctcagggaaggattcaggaagcgcctaaactc
acgcatttgtaa
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