Pseudoliparis swirei (Mariana hadal snailfish): 130206296
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Entry
130206296 CDS
T09868
Symbol
pks1
Name
(RefSeq) uncharacterized protein pks1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
KAsynt_C_assoc
PS-DH
PP-binding
adh_short
PKS_DH_N
Thiolase_N
CurL-like_PKS_C
DUF7080
ADH_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
130206296
NCBI-ProteinID:
XP_056290178
LinkDB
All DBs
Position
16:5604590..5612812
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AA seq
2075 aa
AA seq
DB search
MEDDVAVIGIGCNFPGGEGLDNFWRVLLEGKNCTADIPAERFDTTFWYDADDSKPGKTQT
TKAALIEGFNEFDHKFFGITEAEAEFMDPQQKLLLQCTYRALEDAGVAMESISGSRTGVY
IGLMNRDYELLRSNSPTTITHYNGTGTAMSVAANRLSFSFNLTGPSLAIDSACSSSLVAL
HLACQAIKQGDCEMALCGGVSCIIEPRVFVALSKAKMISPEGTSKPFSSRADGYGRGEGC
GVVLLKPLKKAIQDHDNIWGIVSKTAVNQDGRSVTPITKPSMTQQEELLRRMYSESDLAN
VQYIEAHGTGTPVGDPTEAGSISNAIAKARPPGSEALRIGSVKSNIGHTESAAGVAGLIK
VLLMMKHETIVPSVFYSEDNTSVDVKALRIRIPVKAERWETEGSSGKVAGINSFGFGGTN
AHVIIREHRKTTAPTQIPNNCPKLFVISAACEESLHLSIADTLQRLRRNQSVDLQALTYT
SACRRSHSRHKFRKAFPTSSLSDLEQRLTSAVKTNVDSIRSDIQVVFVFCGNGVAYRGMC
KQLLRDVPIFRDKVRAVENLFQSHKSTSVSRWLAGEDDNDVFSRPDVVQPLLFAIQVGIA
ALLKHWGVKPDAVLGHSVGEVAAAHCSGLLSLEDAVKAVHRRSVLQSEVTGGKMLVVGNV
AVENVLRTLPEFSGEICVAALNSPQSCTLSGDADAIDVLHQRLKMLRERDLFLRELDVPA
AYHSHMMDPILDDVEKSIESLNANDKECKLFSTVTGDSCSDGDFVTGSYWARNIREPVLF
ERALRAATKDKPSTVFVEIGPRSALQRNIHESLGKNATVLPSVQPEKDYATLLSTVGKLF
ELGISVDWHQLHRGCETLPTALPVYQFVNAKKELNFEALRKGGDMSTPFTLLSRTKPDDK
EYMCDLSLETAPYLWEHKNNGVSIVPGAFYVELAYAAVMASLRPKKPVSQLQLSVRFESL
FALSSNSHQLKVKLEHAENGASFKIQSSVATHASGTYRCADGQPLLEEPIICLDVVSKRC
NLVMKRKEIYSILSLAGFEYGAVFKQLNDVHFGDEFKEAVTAIQVPGQLLQHLHEFFLHP
VLLDYFLQMTAVVAIGRLTAKPGFPSAIGSITISGPLQEDMVMYLRATQETPDFLDVCGS
FATPEGHVLVELKGVRISFLGNCSSALQSWFFHNEITAIPDTRDLQNCKIKAIVFEDKLG
IAKLLKPYIHPESTLVESREHWMADQIRNVVSGSLTNNVDIENVLFIWGVEDLSRLSSEK
TLDCLVNCCELFRQIVLALKESERSLTVRVVTYRSTETTVDHVGPGFVLSGMTRACAAEM
AGLSFQLVDLASVTSEDIETLACVINTCKEQEVVISKGQALTTRIARTPMRVGTLSEGDE
HSVYVRDFVLQTADPYRMTHLSAIPYDTNANPIQEKSVEIRLTNVCVQSSDYFPVTASHL
KFGKTMYWNKHTAHNHKLLALDFSGIVTAVGKDVHDLRVGDPIASCYPVVATAKVVIPEA
VCYSTKRLPFLKETPCVSYFILAWEILQKMLVQVKHQHRKLIIISSNLASALIKVLALTA
NRSGWNVSSLSHFGGESLHSDESHAFVFLPPFDNSWQGVHDSGRHDRHVIFVSSDRISQS
FSANMFALKSEHIHVHKLDVANVLQRASLQMQNRDISDWLLSLGFDAASLPLKRETFQIS
SLIEPENNADAESYFTTKTVQQVVLDHGEADCQMSDIPLLTGSGQLFKPSCVYIVTGGLS
GLGFETVKFIACHGGGCIATLSRSNLTDELQFEMELLQRRYGVTITNVKCDVSVSTQVVD
AISMIGQRFSSRPIKGVFHSAAVLHDALIENLDESLLRKVLRPKVSGALNLHYATLSNKL
DFFVCYSSISSFIGNASQCNYAAANSFLDTFCHYRRNLGLAGQSINWGPLNLGLLLNKGH
FQKFLEAKGMMTMDVCDIQEALEKCLLMNRPQQVICKFNFKNLNVHVLSQNASLRERLSA
LVEMELEVELSHEPSVQRSSSAYESVRTIVSDISGVSVDELDDDLALCALGIDSMLAMTL
QNKIFQETGVNVPLVKILDPNSTLATLAALVKNNG
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgtcgctgttatcgggatcggatgcaacttccctggaggtgaggggttg
gacaacttctggagggttttgttggagggtaaaaactgtactgcagatattccagcagag
agatttgacaccactttttggtacgatgccgatgatagcaagcccggaaagacacagaca
accaaagcagctcttatagagggctttaatgagttcgatcacaagttttttggcattact
gaagcagaggccgaattcatggaccctcagcagaaactcctcctgcagtgtacatacagg
gcgttggaagatgcgggagtggcgatggaaagcatcagtggaagcagaactggagtttac
ataggtctcatgaacagggactatgaactactccgaagcaacagcccaacaacgataacc
cactacaatggcactgggacggccatgagcgtggctgccaacagactgtccttctccttc
aacctcacgggcccttcgctcgctattgacagtgcctgttcttcatctttggtggctctg
catttagcctgccaggctataaagcaaggagactgtgagatggctctttgtggaggtgtc
agttgtatcatagagccaagagtgtttgtggctctcagcaaggccaagatgatctcgcct
gaagggaccagcaagccgttctccagcagagcagatggctatggaagaggagagggctgc
ggggtcgtcctcctcaagccgctgaaaaaggctatacaagaccatgacaatatctggggc
atcgtcagcaaaacggcggtcaaccaagatggacgctcagtcactccaatcaccaaaccc
tccatgacgcaacaagaggaactcctgcgcagaatgtactcagagtctgaccttgcaaat
gtccagtacatagaggcacacgggaccggaactcctgtgggagatccaacggaggcggga
agcatttcgaacgccatcgccaaagccagacctccaggttcagaggcactacggatcggc
tctgtgaagagcaacatcggacacacggaatctgctgctggagtggccggactcattaag
gtactcttgatgatgaagcacgagacaatcgttccctctgttttctattcagaagacaat
accagcgtagatgtaaaagcgttgaggataaggattccggttaaagcggaaagatgggag
accgaggggtcctcgggaaaggtagctgggatcaacagctttgggttcggaggcacgaac
gcacacgtgattataagagagcacagaaagaccactgcacccactcagattcccaacaac
tgtccaaaactctttgtaatatctgcagcctgtgaggaatcgttgcacctgtccatcgct
gacaccctccagaggcttcgccgcaatcaatcggttgatctacaggcgttgacgtacacc
tcggcatgcaggaggagtcattccagacacaaatttcggaaggccttcccaacatcttcc
ctgtcagatttagaacaacggctaacatctgcagtgaaaacgaatgtcgattcaatcagg
tccgacatccaggtggtctttgtgttctgtgggaatggggttgcttacaggggtatgtgc
aagcagctcctgagagatgttcccattttcagagacaaggtcagagcagttgagaatctt
ttccaaagtcataaaagcaccagcgtgagccgatggcttgccggcgaagacgacaatgac
gttttcagccggccggatgtcgtccagcctcttctctttgcgattcaggttggcatcgcc
gctctcctgaaacactggggagtcaaacccgacgccgtgctcgggcactccgtcggcgag
gtcgccgccgcccactgttccggactcttgtctctcgaggacgccgtgaaagcggtgcac
cgccgcagtgtccttcagagtgaggtcacgggcgggaaaatgcttgttgttgggaatgtc
gccgttgaaaatgtattacggacccttccagagttttccggggaaatttgtgtcgcagcg
ctcaacagcccccaatcttgcaccctgtcgggggacgcagatgctatagacgtccttcat
cagaggctgaagatgctcagggaaagagatctcttcctccgtgagttggatgtgccagca
gcataccacagccatatgatggatcctatattagatgacgttgagaaaagtatcgagtcc
ttgaatgccaacgacaaagagtgcaaactgttctcaacagtgactggggacagttgttca
gacggcgactttgtgacgggcagctactgggcaaggaacattcgggagcctgtcttgttt
gagcgtgcgctgcgcgctgccaccaaagacaagccatcaacggtcttcgtggagattgga
cctcgtagcgctctccaaagaaacatacatgaatctttggggaagaacgccacggttctt
ccctccgtccagccagagaaagattacgccacgttgttgtctaccgtgggaaaactattt
gaactgggcatcagtgtggactggcatcagctccaccggggttgtgagactttgcccaca
gctcttccagtctatcagtttgtcaacgcaaagaaagaattgaatttcgaagctttgaga
aaaggcggtgacatgtcgaccccctttacgctcctgtctcgaacgaagccggatgacaaa
gagtacatgtgcgacctctcattggagactgccccatatctttgggagcataaaaacaat
ggcgtttccattgtgccaggcgcgttctacgttgagctcgcgtatgccgcagtgatggcc
agtttaaggcccaagaaaccagtttctcagctccagctcagtgtaagatttgagagtctg
tttgcacttagctcaaactctcatcagttgaaagtaaaactcgagcatgcagagaatgga
gcttcattcaaaatacagtcttctgtcgcaacacatgcctctggcacatacaggtgtgca
gatggccaaccgctgttagaagaaccaatcatttgtctggacgtggtctccaaaaggtgc
aacttggttatgaagagaaaagagatttattcaattctttctctcgcaggatttgaatac
ggagctgtcttcaaacagcttaatgatgtgcattttggagatgaattcaaggaagccgtg
acagcgattcaggttccaggtcaacttctacaacaccttcatgagtttttccttcaccct
gtgttattggactatttcctgcaaatgaccgctgtggttgctattggtcggctcactgca
aagccgggattcccctcagctatcggtagtataaccatttcaggaccactgcaagaagat
atggtcatgtacttacgagccactcaagagactccagacttcctggatgtatgcggtagc
tttgccaccccagagggtcatgtgctggtagaacttaagggggtgaggatctcatttttg
ggcaattgctcaagtgctcttcagtcgtggttcttccacaatgaaataactgcaatccct
gacacaagagacttgcaaaattgcaaaataaaagcaatagtatttgaagacaaacttggc
atagctaaactgctcaagccatacattcacccagagtcaacacttgtggagagcagagag
cactggatggcagaccaaattcggaatgtagtgtccggctcactgaccaacaacgttgat
atcgaaaatgttctcttcatctggggtgtcgaggacctcagtcgcttgtcatccgagaag
acgctcgactgcttggtgaattgctgcgagctgtttcgccagattgttttagccttgaag
gagagcgagcgctctctcactgtccgtgtcgttacttatcgatcgacagaaacgactgta
gaccacgtcggtcctggcttcgtgctgtccggtatgacacgggcttgtgcggcagagatg
gcgggtctctcttttcaactggtcgaccttgcttctgtgaccagtgaagacattgaaacg
ctggcttgtgtgatcaacacatgcaaagaacaagaggtcgtgatcagcaaaggccaagcg
ttgacaacaagaatagctcggacgcccatgagggtcgggactttaagtgaaggtgatgag
cactcggtgtatgtgagagactttgtcctacagacagctgatccataccgaatgactcac
ttgtctgccatcccctacgacaccaatgctaatcctatccaagagaagtcagttgagatt
cggctcaccaatgtgtgcgtgcagtcgtccgattactttcccgtcaccgcatcgcatttg
aagttcggaaagacgatgtattggaacaagcacacggcacacaatcacaagcttctcgct
ttggattttagcggcattgtcacagctgtcgggaaggatgttcacgacctcagagtggga
gatcctattgcttcatgttatccagttgttgccactgcgaaggtcgtgattccagaagct
gtgtgctacagcacaaagagactcccgtttctgaaagagacgccatgtgtgtcttacttt
atactcgcatgggagatcctgcagaaaatgctggttcaggttaaacaccaacacaggaag
ctgatcatcatctcctccaacttagcctcagccctgataaaggttttggctctgacggca
aaccggtccggctggaacgtttcctcattgtcacattttggaggggaatctctgcattct
gatgagagtcacgctttcgtttttctgcccccgttcgataactcgtggcaaggggtgcat
gacagcggtcgtcatgacagacacgttatttttgtgagcagcgatcgcatctcacaatcc
ttctcagcaaacatgtttgcactgaagagtgaacacatccatgttcataagcttgacgtg
gctaatgttctccagagagcgagtctgcaaatgcagaacagggatatctctgattggctg
ttgtcgttaggctttgatgcagcatctcttcctttgaaaagagagacttttcaaatatct
agcttaatagagcctgagaacaatgcagatgccgagtcctacttcacaacaaagactgta
cagcaagttgttctagatcatggagaagctgactgtcaaatgtcagatatccctttgctg
acgggttctggacaactctttaaaccgagttgtgtttatattgtcactggagggctctct
ggtttgggatttgagacagtaaagttcattgcctgtcatgggggaggttgcattgcaaca
ctgtccagaagtaatctgactgatgagttacagtttgagatggaactcctccagagaaga
tatggagtcacaatcacgaatgtcaaatgtgacgtttctgtgtcgacgcaggtcgtggac
gcgatctcaatgatcggacaaagattctcctctcgaccgatcaaaggagtgtttcacagc
gctgcggttttacacgacgcgttgatcgaaaacctcgacgagtcccttctccgaaaggtg
ctgcggccgaaagtgagtggggctctgaaccttcactatgcgacactttccaacaaactg
gatttctttgtgtgctactcctccatctcttccttcatcggcaacgcctcgcaatgtaac
tacgcggcagccaattcgttcctcgacacgttctgtcattacaggagaaacctcggtctc
gctggacagtccatcaactggggtccgttgaacctcggcctcctgttgaacaaaggccat
ttccagaagttcctggaggccaaagggatgatgacaatggatgtgtgtgacatccaagag
gcacttgaaaagtgtctcctgatgaacagaccacaacaagtcatctgcaagttcaacttc
aaaaatcttaacgttcacgttctttcgcaaaacgcgtccctcagagagcgtttgtcagcg
ctcgtggaaatggagctagaagttgaactgagtcatgaaccctcggttcagcgttcgtct
tccgcgtatgaaagtgtgagaacaatcgtcagcgacatcagcggcgttagcgtcgatgag
ctggatgacgacttagctctgtgtgcactgggtatcgactcgatgttggccatgactctg
cagaataagattttccaagaaaccggcgtaaatgtacctttggttaaaatattggacccc
aacagcacgctggccactttggcagctcttgtgaagaataatggttaa
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integrated database retrieval system
