Pseudoliparis swirei (Mariana hadal snailfish): 130206324
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Entry
130206324 CDS
T09868
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130206324
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130206324
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130206324
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130206324
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
130206324
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130206324
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130206324
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130206324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Arg_repressor
DUF6778
Motif
Other DBs
NCBI-GeneID:
130206324
NCBI-ProteinID:
XP_056290210
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All DBs
Position
16:9985991..9992495
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AA seq
675 aa
AA seq
DB search
MEEILAPLREAVREQGDLVHQLKEKGVKEQELSRAVAELKARKKILEAKELALQPKDDTV
DRVKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEID
CTMLTPEAVLKTSGHVDKFSDYMVKDAKTGECYRADHLLKADLKKLMSDEKCSEKVNKME
DVITQMDNYTQQELTDLFVKYNVKSPSTGNDLTPPVSFNLMFQTSIGPGGNTPGYLRPET
AQGMFLNFKRLLEFNQGKLPFGAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
IHPKFSNVADLDLLLFSSKAQTSGQSAHIMKLGDAVEQGVINNSVLGYFIGRIYLYLIKV
GLSKDKVRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCFDLTCHSRATKVPL
VAEKPLKEPKVVNVVQFEPNKGAIGKAYKKDAKVVLEYLAACDECYISDQEKLLNQEGEF
SVETQGRTFKVTKDMVAVKRFQKTLHVEEIVPNVIEPSFGIGRIMHSIFEHSFRIRQGDE
QRTYFSFPATVAPYKCFILPLSQNQEFMPFVQQLSEAMTKIGVSHKVDDSSGSIGRRYTR
SDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVAELPGMVQDLANGTLTWAEVE
KKYPVFEGQETIKKE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatactggcgcctctaagggaggctgtgagggaacagggtgacttggtgcat
cagttgaaggaaaagggcgtcaaagagcaggagctgagcagagctgttgcagagctgaaa
gcccggaagaagattcttgaagcaaaggagctggctttgcagcccaaagatgacacggtg
gacagagtgaagatggaggacaccttaaagaggagattcttctacgatcaagcctttgcc
atctatggaggtgtgagcggcctgtatgacttcggccctgtgggctgtgccctgaagaac
aacatcctgcaggtctggaggcagcacttcatccaggaggagcagatcctcgagattgac
tgcaccatgctgaccccagaggcggtcctcaagacgtcgggacatgtggataaattttcc
gactacatggtgaaagatgccaagaccggggagtgctaccgcgccgatcacctcctcaaa
gctgacttgaaaaaactaatgtctgatgagaaatgctctgagaaggtgaacaagatggag
gacgtcatcactcagatggacaactacacccagcaggagctgacggacctctttgtgaaa
tacaacgttaagtctccctccacaggaaacgacctcacacctcccgtctctttcaacctg
atgtttcagacgtccatcgggccaggggggaacacgcccggctacctgaggcctgaaacc
gctcaggggatgttcctcaacttcaaacgcttgctggagttcaaccagggaaagcttccc
tttggcgccgctcagattggaaactccttcaggaacgagatctctcctcgctccggactc
atccgtgtcagagagttcaccatggctgagatcgagcactttgtggacccaagcgagaag
atccaccccaagttctccaacgtggccgacctcgacctcctgttgttctcctccaaggct
cagaccagcggccagtctgcacacatcatgaagctgggtgacgctgtggagcagggcgtg
atcaacaattccgtgttgggttacttcattgggagaatctacctgtatctaatcaaagtg
gggctgtctaaagataaagtgcgtttccgtcagcacatggagaacgagatggctcactac
gcctgtgactgctgggacgcagagtccaaaacctcctatggctggattgagatcgtgggc
tgtgctgaccgctcctgctttgacctcacgtgtcactcccgagccaccaaggtgcctcta
gtggctgaaaagcccctaaaagaacccaaagtggtgaacgtcgtccagtttgagcccaat
aagggagccatcggaaaggcctacaagaaagatgccaaagtggttctggagtacctggct
gcctgtgacgaatgctacatcagtgatcaggagaagctgctcaatcaagagggggagttc
agcgttgagacacaaggcagaacctttaaagtgacaaaagacatggtcgctgtgaaaagg
ttccagaaaactctgcacgtggaggagattgttcccaatgtaatcgagccgtcctttggc
atcggcagaatcatgcactccatcttcgagcactcgttccgcatccggcagggcgatgaa
cagaggacgtatttcagcttccctgccaccgtcgctccttacaaatgtttcatccttcct
ctgagccaaaaccaggagttcatgccatttgtccaacagttatccgaggcgatgactaaa
atcggcgtgtcccacaaggtggacgactcctcaggatccatcgggcggcgctacacccgc
tccgacgagatcggggtggcgttcggcatcaccatcgacttcgacacggtgaacaagacg
ccgcacacggccacgctgagagaccgcgactccatgaggcagatcagggccgaggtcgct
gagttgccggggatggttcaagatctggctaacggcaccttgacgtgggctgaggtggag
aaaaagtacccggtctttgaaggacaagagaccatcaagaaggagtag
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