Pseudoliparis swirei (Mariana hadal snailfish): 130206353
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Entry
130206353 CDS
T09868
Symbol
jph1a
Name
(RefSeq) junctophilin-1a isoform X1
KO
K19530
junctophilin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
130206353 (jph1a)
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Gene cluster
GFIT
Motif
Pfam:
MORN
Motif
Other DBs
NCBI-GeneID:
130206353
NCBI-ProteinID:
XP_056290251
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Position
16:complement(11780393..11809514)
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AA seq
693 aa
AA seq
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MTGGRFDFDDGGTYCGGWEDGKAHGHGICTGPKGQGEYAGSWSHGFEIVGVYTWPSGNTY
RGYWSQGKRHGLGVENKGKWMYRGEWSHGFKGRYGIRQSHNTPARYDGTWSNGLQDGYGI
ETYGDGGTYQGQWMGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGAVLQDLS
SPADMPTGSRGGFVLNFHSDSEVVTGKKKGLFRRGSLFGSLRQLRKSDSRTSISSKPSSA
RSDAAMSRISSSDANSTISIGDGELPDEDLPLEDHVDATTTETYMGEWKNDKRNGFGVSE
RSNGMKYEGEWLNNKRHGYGCTVFPDGTKEEGKYKNNVLVRGIRKQLIPLKNPKTKEKMD
RAVEAAQRAAAIARSKVEIAASRTAHARTKSEAADQAAISAVHDSEIARAVARELSPNFY
QPGPDYLKQPLKEPVEIREVSVEKKGNSHKNSPHFYRKGTTPPHSPVTSPVATPPPSPHS
GKKKGQPANSTSRKTSKEEKPSRKTSKEEKSSHKTSKDERSSRKLSKEERPAITDGPKSS
HVHVEASNKPTNIQQPTPASAPSPNPPTMPVNGQLHTEYHSYYVKTPTRVQPPPEPEEDI
EGEPSVLELARMAPPPHKSYSIPPPKPASIRENKSDPKLRKQDSLKPKSLADTKKASMEI
AENMEETGPNSVLVAMVMLLNIGLAIIFVHFLT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggaaggtttgatttcgacgacggtggcacttactgcggggggtgggaggat
ggcaaagcccacggacacggcatctgcaccggacccaagggccagggcgagtacgccggg
tcctggtcgcacggctttgagatagtgggagtgtacacctggcccagcgggaatacctac
aggggctactggtcccaggggaagcggcacgggctcggtgtggagaataaagggaagtgg
atgtaccgcggagagtggagtcacggttttaagggtcgttacgggatccggcaaagccac
aacacacccgcgagatacgacggtacctggagcaacgggctgcaggatggatatgggatc
gaaacctatggcgatggcggtacctatcaaggccagtggatgggtgggatgcgacacggc
tatggagtgcgtcagagtgttccctacggcatggccacagtcatccgctctcctctccgc
acgtctctggcctccctgcgctctgagcagagcaacggcgcagtgctccaggacctctcc
tcccccgcagacatgccgacaggcagtcgtggcggcttcgtccttaacttccactcagac
agcgaggttgtcaccggtaagaagaagggcctgttccgccgaggctcactctttggcagc
cttcggcagctgcgcaagtctgactctcggacctctatctccagcaagcccagctcggcg
cgcagcgatgcagccatgagccgcatcagctccagtgatgccaactctaccatatccatc
ggcgatggcgagctgccagatgaggacctaccactcgaggaccatgtggatgccaccacc
actgagacctacatgggtgaatggaagaacgacaagcgcaatggatttggtgtttcagag
agatccaatgggatgaagtacgagggagagtggcttaacaacaagcgccatggttacggg
tgcacagttttcccagatggcaccaaagaagaagggaagtacaaaaataacgtgctggtg
cgtggaataaggaagcagttgattcctcttaagaaccccaaaaccaaagagaagatggac
cgggctgtggaggcggcacagagggctgcagccatcgccaggagtaaagtggaaatagca
gcttccagaacggcccatgccaggacaaaaagcgaggccgcagaccaggccgccatctct
gctgtgcacgactcggaaatcgccagggcggttgctagggagctctcccccaacttctac
caaccaggacctgactacttaaaacaaccactgaaggagcctgtggagatcagagaggtc
tctgttgaaaagaagggcaactcccataaaaattctccccacttctaccgcaaaggaacc
actcctccccactcccctgtgaccagtcctgtggccacgcctcccccctcgcctcactcc
ggcaagaagaaaggtcagcccgccaacagcaccagccgcaaaaccagcaaagaagaaaaa
ccgtctcgcaagacaagcaaagaagagaagtcaagtcataagaccagcaaggatgagcgg
tctagtcgaaagctgagtaaagaggagaggccggccatcaccgatggccctaaaagttct
catgtgcacgtcgaggcttcaaataaacccactaatattcagcagcctaccccagcatct
gctccttctccaaatcctccgacaatgccagtcaatggccagcttcacaccgagtaccac
agttactacgtgaagacccctacaagggtccaaccaccaccggagcctgaggaggatata
gaaggagagcctagtgtcctggaactggctcgtatggccccaccaccccataagtcctac
agtatcccccctcctaagccagcctccatcagggagaacaagagcgacccaaaactcagg
aagcaggattccctaaagccaaagagcctcgcagacacaaagaaagccagtatggagatt
gcagaaaacatggaagaaacaggtcctaactcggtccttgttgctatggtaatgctgctg
aatattggccttgcaattatatttgtccattttctgacatga
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