Pseudoliparis swirei (Mariana hadal snailfish): 130206419
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Entry
130206419 CDS
T09868
Name
(RefSeq) NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1
KO
K05633
NEDD4-like E3 ubiquitin-protein ligase WWP1 [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130206419
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130206419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206419
04121 Ubiquitin system [BR:
pswi04121
]
130206419
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130206419
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130206419
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130206419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
130206419
NCBI-ProteinID:
XP_056290358
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All DBs
Position
16:16984591..17009421
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AA seq
983 aa
AA seq
DB search
MATASSRAESSHNHRGTSQLHAIVSCAKFKRKKSLFGTAIYVEVTAEGETRRTTKSNSSS
SPKWDETLTLNVTPRTQVDFKVWSHHTLKADALIGKATLDLIQALEQHDGKLENVKEVLK
LSVEQKGVLVPVGELTVYLDGLTVTGQEELAPLTNGNAANGTKVQQNGDSIHENGDSSSS
SRAANSALNGTAVGPRSTSCSVSYGVDGQEPSSSCSLGLGHVINGDITPNSTPVHQPSDV
DTESRLVNGETCEAAPGPSPATTGDVLPPADDREDCNQEASPPYHDTAPDGTPQTQPTST
QPPAFSSTAKPTDGTAAASSALTSSAQGPQTITTSSSTSSPPPAIEEANASGVGGGGSST
SSATVTTDGAKPRQQVPNAGAADPLPPGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPG
WERRVDDRGRIYYVDHNTRTTTWQRPTMESVRNFEQWQSQRSQLQGAMHQFNQRYLYSAS
MMSAENDPLGPLPPGWERRVDSNDRVYFVNHSTKTTQWEDPRTQGLQNEDPLPEGWEIRY
TREGVRYFVDHNTRTTTFSDPRTGKSSVTKGPQIAYERSFRWKLAHFRYLCQSNALPSHV
KITVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPM
YCLFEYAGKSNYCLQINPASAINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRML
NKKLLLKDLESIDPEFYNSLIWIRDNNIEECGLEMYFAVDMEILGKITSHDLKPDGTNVL
VTAENKEEYIRFSITAVSSKCSRDLFFCPYKVRLCDALSLMAEWRFSRGVEGQTKAFLDG
FNEVVPLQWLQYFDEKELEVMLCGMQEVDLQDWQRNTVYRHYTRNSKQIIWFWQLVKEVD
NEVRLRLMQFVTGTCRLPLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPY
KSFDQLKEKLLFAVEETEGFGQE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcctcttcgagagccgagtctagccataaccacagaggaacatcacagctc
catgccattgtttcctgtgccaaattcaagaggaagaaaagtctgtttgggactgccatt
tatgtggaggtgacagcggagggggagacgcgacgcacaacgaagtccaacagctcctcc
agtccgaaatgggatgagacgctcactctgaatgtaacaccgcgcacacaggtggatttc
aaagtatggagtcaccacaccctgaaggcagacgctctgatcggcaaagccacgctggac
ctaattcaagccttggaacagcatgacgggaaattggagaatgtgaaggaggtgctgaaa
ctgagcgtggagcagaagggagttctggttcccgttggcgagctgaccgtctacctcgat
ggcctgaccgtcactggccaggaagaactggcaccgcttaccaacggcaatgcagcaaat
ggcaccaaagtccaacagaatggagattccatccatgaaaatggagactcgtcttcttcg
tcgagggctgctaacagcgcattgaatgggacggctgtgggccccaggtccacttcctgt
tcggtctcctatggtgtggatggacaggagccttccagctcctgcagcctcggcctcggc
cacgtcatcaacggagacatcacacccaactccaccccagtccaccaaccttcagacgtt
gacacggagagtaggctggtcaatggagagacctgtgaggctgcgcctgggccatcgcct
gctacaacgggtgatgtgctgccccctgcagatgaccgtgaggactgcaaccaagaagcc
tccccgccataccacgacacggcaccggatggcacacctcagacccagccaacctctaca
cagcctccggccttctcttccactgctaagcctacagatggcactgctgctgcttcctct
gcattaacctcctcggcacagggcccccaaaccatcacgacctcctcatcaacgtcctcc
ccccccccggctatagaagaagcgaatgcttccggagtcggcggcggtggtagcagtact
agcagtgcaactgtaactaccgatggggccaagcccaggcagcaggtccccaatgctgga
gctgcagaccctctgccgccggggtgggaacagcgtaaagatccgcatgggagaacctat
tacgtagaccacaacaccagaactacaacctgggaaagaccacagccactaccaccaggt
tgggagcgtagagtggatgaccggggcaggatctactatgtggaccacaacacccgcacc
accacatggcagcgtcccactatggagtcggtccgcaattttgagcagtggcagagccag
cgcagccagctgcagggagctatgcaccagtttaaccagcgatacctctactctgcatcc
atgatgtcggctgagaacgatcctctcggcccactacctcctggatgggagaggcgtgtg
gactccaatgaccgagtgtactttgtcaaccatagcaccaagacaacgcagtgggaagac
ccccggacccaagggctacagaatgaagaccctcttcctgaaggttgggagatccggtac
acgcgggaaggagttcgctactttgtggatcacaacacccggaccaccacgttcagcgat
ccccgcaccgggaagtcctctgtcaccaaaggccctcagattgcttatgagcgcagcttt
cgatggaagcttgcccatttccgctacttgtgccagtccaatgctctccctagccatgtg
aagatcaccgtgtccagacagacgctgtttgaagactctttccagcaaattatggccctg
aagccttacgacttgaggaggcgactctatgttatcttcagaggcgaggagggtctggac
tatggtggcttagcccgagagtggttcttcctgttgtcccatgaggtgctgaaccccatg
tactgtctgtttgagtacgctggcaagagcaactactgtctgcagatcaaccccgcctcc
gccatcaacccggaccacctctcctacttctgctttataggccgcttcatcgcaatggca
cttttccacggcaagttcatcgacacaggcttctctctgcctttctacaaacgcatgctg
aacaagaagctgctactcaaagacctggagtccatcgacccagagttctacaactcgctt
atatggatacgggacaacaacatcgaggagtgcggtctggagatgtacttcgcagtggac
atggagatcctggggaagatcacttctcatgatctcaaacccgatggcaccaacgttctg
gtcactgcggagaacaaggaggagtacatcaggttcagtataaccgccgtctcctcaaaa
tgctcccgcgatcttttcttttgtccttacaaagtacgtctgtgcgatgctcttagtctg
atggcagagtggaggttctcccgtggggtggaaggtcagaccaaagctttcctggacggc
ttcaacgaggtggtcccacttcagtggctccagtactttgacgaaaaggagctggaggtg
atgctctgtgggatgcaggaggtcgaccttcaggactggcaaaggaacacggtgtatcgc
cactacacgaggaacagcaaacagatcatctggttttggcagctggtgaaagaagtggac
aacgaagtgcgactgcggctcatgcagtttgtcacgggaacctgccggctgcctctgggc
ggctttgctgaactcatgggaagtaacgggccccagaagttctgcattgagaaggtgggg
aaggacacgtggcttcctcggagccacacatgcttcaaccgtctggacttgcctccttac
aagagtttcgaccagctgaaagagaagctgctctttgccgtcgaggaaacggaaggattt
ggccaagaataa
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