Pseudoliparis swirei (Mariana hadal snailfish): 130206420
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Entry
130206420 CDS
T09868
Name
(RefSeq) copine-3-like isoform X1
KO
K24524
copine 1/2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130206420
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
130206420
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GFIT
Motif
Pfam:
Copine
C2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
130206420
NCBI-ProteinID:
XP_056290362
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Position
16:17014867..17023175
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AA seq
543 aa
AA seq
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MASGGAPVPGATHWATKVELTISCENLMDMDVFSKSDPLCALYINTSGSHWYEFGRTEMI
LNCLNPKFAKRFVIDYYFEMVQRMKFCVYDIDNDTHDLGDDDFLGELECTLGQIVSNRQM
TRSLLLKDKRPAGRGTITICAEEITDTRVANFEVSARRLDKKFLWWSDPFLEFYKQTETG
WQLAHRTEVVNNNLNPLWRPFRISLRSLCGGDVENPIKVDCYDHHVNGSHDLIGSFKATL
AEMQMGTHVSPADFECITPKKLKKKNYKNSGVISIKNCQVVKEYTFLDFIMGGCQINFTI
AIDFTGSNGDPSSPQSLHYINPEGYNEYLTAIWAVGNIIQDYDSNKMFPVFGFGAQLPPA
WQVSHVFPINFNPANPFCAGIEGVVQAYQQCLPQLKLWGPTNFSPIINHVACFARQALRQ
SVASQYFVLLIITDGVITDMDQTRSAIVEASRLPMSIIIVGVGGADFSEMEFLDSDDKLL
HSPRGEVASRDIVQFVPFRDFQGNSVALAQSVLAELPDQVASFFNSRNMKPCVSEPSEAV
GFK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggtggggccccggtgccaggggccacccattgggccaccaaggtggagcta
accatctcctgtgagaacctcatggacatggacgtcttctccaagtctgaccctctgtgt
gccctgtacatcaacacgtcaggctcccactggtatgagtttggacgcacagagatgatc
ctgaactgcctcaatccaaagtttgccaagaggtttgtgatcgattactacttcgagatg
gtgcagaggatgaagttttgcgtctatgacattgacaatgacacccacgacctgggcgat
gatgattttttgggggagcttgaatgcaccctgggccagattgtttccaacaggcagatg
acgcgatctctgttgctgaaggacaagcggcctgcagggcgtgggaccatcacaatatgt
gctgaagagataacagacaccagggtggcaaactttgaggtgtcagcccgcaggctggac
aaaaagtttttgtggtggtccgaccctttcctggaattctacaagcagacagaaactgga
tggcagctggctcacaggaccgaggtggtgaacaacaacctaaacccactgtggagaccc
ttccgcatctcactgcgatctctctgcggaggagatgtggaaaaccccatcaaggttgac
tgctatgaccaccacgtcaatggctctcatgaccttattgggagctttaaagccacactg
gctgagatgcaaatgggaacacacgtttcccctgctgactttgagtgtatcaccccaaaa
aagctaaagaagaaaaactacaaaaactctggagtcatttccatcaagaactgccaggtg
gtgaaggagtacaccttcctggactttattatggggggttgtcaaatcaacttcactatt
gccattgacttcaccggctctaatggggatcccagctctccccagtccctccactacatc
aaccctgaaggctataatgaatacctgacagccatctgggcggtgggtaatatcatccag
gactacgacagtaacaagatgtttcctgtctttggtttcggggcccagctccctcccgcc
tggcaggtttcccatgtgtttcctattaatttcaatccagccaatccattctgtgcaggc
atagagggtgtggtgcaggcctaccagcagtgtcttccccagttgaagctctggggcccc
acaaacttctctccaattatcaaccatgtggcgtgcttcgccagacaagccctccggcag
agtgtggcctcccaatactttgtgctgctcatcatcacagatggcgtgatcacggacatg
gaccagacgcgctctgctatagtggaggcctctcgcctgcccatgtcgatcatcatcgtg
ggtgtggggggggcagacttcagcgaaatggagttccttgacagcgatgacaaattgctg
cattcgcccaggggcgaagtcgcctcaagggacatcgtccagtttgtgcccttcagagat
tttcaaggtaacagcgtggcccttgcccagagtgtcctggcggagctgcctgatcaagtg
gcctccttcttcaattctcgcaatatgaaaccttgtgtttctgagccgtcagaggccgtt
gggttcaagtag
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