Pseudoliparis swirei (Mariana hadal snailfish): 130206475
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Entry
130206475 CDS
T09868
Symbol
tgfb2
Name
(RefSeq) transforming growth factor beta-2 proprotein isoform X1
KO
K13376
transforming growth factor beta-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04068
FoxO signaling pathway
pswi04110
Cell cycle
pswi04218
Cellular senescence
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130206475 (tgfb2)
04350 TGF-beta signaling pathway
130206475 (tgfb2)
04068 FoxO signaling pathway
130206475 (tgfb2)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130206475 (tgfb2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130206475 (tgfb2)
04218 Cellular senescence
130206475 (tgfb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130206475 (tgfb2)
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130206475 (tgfb2)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Transforming growth factors (RSTK binding)
130206475 (tgfb2)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130206475 (tgfb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
130206475
NCBI-ProteinID:
XP_056290456
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Position
16:complement(19571306..19627548)
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AA seq
415 aa
AA seq
DB search
MNLCVVSLLLTLDLAAVALSLSTCSTLDMDQFKKKRIEAIRGQILSKLKLTNPPEDFPEP
DEVSQDIVAIYNSTRDLLQEKANARAATCERQRSEEEYYAKEVHKVDMQPFYPAENVISP
THFNPYFRRLTFDVSSMEKNASNLVKAELRIFRLQNHGARVSEQRIELYQILGHKDLTSP
TQRYIDSKVVRTQTEGEWLSFDVTEAVNEWLNHRDRNSGFKLSLHCPCCTFVPSNNYIIP
NKSEELEARFAGIDDRFIHGVDLKVFKKRRHSTRAPHLLLMLLPSYRLESQSQSQHTSHR
SKRALDAAYCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYEANFCAGACPYLWSADTQ
HSKVLGLYNTINPEASASPCCVSQDLEPLTILYYIGKIPKIEQLSNMKVKSCKCS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtgtgtagtcagtcttctcctcactctggatctagccgccgtggcgctcagt
ctgtccacgtgcagcacgctggacatggaccagttcaagaagaagcgcatcgaggccatt
cgagggcagatcctgagcaagctgaagctcaccaatcccccggaggacttccccgagccc
gacgaagtgtctcaggacatcgtggccatctacaacagcacccgcgacctgctgcaggag
aaggcgaacgcgcgcgcggcgacgtgcgagcggcagcggagcgaggaggagtactacgcc
aaggaggtgcacaaggtcgacatgcagcccttctacccggcagagaatgtcatttctcca
acacacttcaacccatacttcaggcggctgacatttgatgtgtcttccatggaaaagaac
gcctccaacctggtgaaggctgaacttcggatctttcgtcttcaaaaccatggggcccga
gtgtctgagcagcgcatcgaactctaccagattttaggacacaaggacttgacatcccca
acacagcgatatatcgacagcaaggtggtacgaacacaaacagagggagagtggctgtcc
tttgacgtgacagaggcagtgaatgaatggctaaaccacagagacagaaacagtggattc
aagctcagcctgcattgcccgtgctgtacgtttgtaccatcaaataactacatcattccc
aacaagagtgaggagctggaggcacggtttgcaggtattgatgaccgcttcatccatggc
gttgacctgaaggtgtttaagaagcgccggcacagcactcgagctccacaccttctcctc
atgctgctgccttcataccgactggagtcccagtcccagtcccagcacacaagccatcga
tccaagagagcgctggatgccgcctactgctccagaaacgttcaggacaactgctgctta
cggtcactctacatagattttaagaaggacctgggctggaggtggatccacgagccaaag
ggctacgaggctaacttctgtgccggagcctgtccctatctgtggagtgcagacacccag
cattccaaggtgttaggcctgtacaacaccatcaaccctgaagcatcggcatcgccctgc
tgcgtctctcaggacttggagcccctcaccatcctctactacatcggcaagatccccaaa
atagagcagctctccaacatgaaggtcaagtcctgcaagtgcagctag
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