Pseudoliparis swirei (Mariana hadal snailfish): 130206505
Help
Entry
130206505 CDS
T09868
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130206505 (dync2i1)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Dynein and associated proteins
130206505 (dync2i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
130206505
NCBI-ProteinID:
XP_056290480
LinkDB
All DBs
Position
16:complement(8271944..8282315)
Genome browser
AA seq
1065 aa
AA seq
DB search
MHRDKKLTKEDTWGPADLRRHIREEGHADDNVRRRDDSERKHRGGESVERRRRDPEKESR
RERDKPTEITRERRDEDEKERNSDRKKEASRDRRGDKEKDRKGDDREKRMERDKLVAGKR
HDDDYKRRDREDKHERVKDKERHRDKEKERDKEGRSEEDRDKRREEREKERRREERDREH
RTGDRRERRRHEESGEGEKDRMEKHEREKRERHRERERHKEEYEDKRSDKERRERHGDRK
HLEVKDEREHKEEQRRHEEEREKRHRARGYHDEKLTHDGESREHRGSKDSGEEVRRHRGD
REPAERDKRKERRQREKEEEEEEEPERNHPRDGTSSKKPASDKSLKRETKTEPEVSQLQM
NDVGDTEEPVANDEDCGYDDDFEDYEEDFEEMDESANEGEDESEPQHPEVGEEREELTAE
RRKEIEAIQRAMDEENERVGAARSRQTPSREEEETPKGSRGSEKNQSRSSQRGKFIDFVA
AKQREVSKKVSTKQKKRSTELLRLIDLDFSMTVSLLDLPPVNEYEMYIRAFGTENTKQAY
VQCNEDNADRDIQTEEIEVCEKWTQHPPEHNGASGDPKLSHEARNKSEMNFDSQRLTAFL
RSASQVMVVLLEEDRAERRSLRKPRSQTDTPSFSDGSLQLNTNLSFLYGRRISLVHFSEV
QRHTMMSVHGPTTTPSAVRLDSCTIICIWNIWEPSRPQKVLVYQSEVQCCCFSPGKAILV
FAGTSVGSVVLWDLRERATDHYCLKIGDGEWTFRQPTFSTDGVMAGSRHLSSVTSVEVVP
STAPGGLRPEVPLLASEEESSGLSFQLASLDEMGLLNFWVVVQLPKANEAGSPTDLGLRP
GGKVKLLHSSRLLTAERASRRDAAKTGPLQTLLLKFLPTDSNHFFIGTNMGLVNHETSHG
LKAPPKFYRFQEAGVRLIDVTSIHFSPFRQHLFLVGCGDGSIRLHEVSREHPVAQWRSGT
AGEPVVSLQWAQTRPTVFCVLDGASTIHIWDLLESDAQPVVTERMDSDRVTAMAVFGDSG
QQNTYSGIALAHESGKIEMQYFTKAFTVPTAAEEEKLESLATDAF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcacagagacaagaaattaaccaaggaagacacatggggaccagctgacctgagaaga
cacatcagggaggagggacatgctgatgacaatgtcaggaggagagatgacagtgagaga
aagcaccgtggtggggaatccgtagagagacgccgcagggacccagagaaggagtcaaga
cgagagagagacaagcccacggagattacaagggaaagaagagatgaagacgaaaaagag
cgaaattcagatcgaaaaaaagaggcatcgcgggataggagaggcgataaggaaaaggat
agaaagggagatgacagggagaagagaatggagagagacaagttggtggctgggaagagg
cacgatgatgactacaagaggcgggatagagaggacaagcatgaaagggtgaaggacaag
gaaagacacagagataaggagaaagagagggataaagagggacgcagtgaggaggacagg
gacaaaagaagggaagagagagaaaaggaaagacgaagagaagagcgggacagagaacac
aggaccggagaccggcgggagagacggagacacgaggaaagtggagaaggggaaaaagat
cggatggaaaagcacgaacgagaaaagagagagcgccatcgagagagagagcgacacaaa
gaggaatatgaagacaagaggagcgacaaagaaagacgagagagacatggagacagaaag
catttggaagtgaaggacgaaagagagcacaaagaagaacagagaagacatgaagaggag
agagaaaagagacacagagcgagaggatatcatgatgaaaagctgacgcatgacggcgaa
tccagggagcatcgaggctcgaaggattcaggtgaagaggtcaggcgccatcgtggtgac
agagagccagcagagcgggacaaacgcaaagagaggaggcaacgggagaaagaggaggag
gaggaggaggaaccggaaagaaatcatcccagagacgggaccagctccaagaaacctgca
tctgataaaagtctcaagcgtgagactaaaactgagcctgaggtatctcagctccagatg
aacgatgtaggagacacagaagagcccgttgccaatgatgaagattgtggctatgatgat
gactttgaggattatgaggaggactttgaggagatggacgagagcgcaaatgaaggcgag
gacgagagcgagccgcagcatccagaggtcggggaagagagggaagaacttacagcggaa
aggagaaaagagattgaagcaattcagagagccatggacgaagagaacgagagagtcgga
gcagctcggtccagacaaaccccgagcagagaggaggaagaaacgcccaaagggtccaga
ggatcagaaaagaaccagagcagatcctcccaacgcgggaagtttatcgactttgtagcc
gcaaagcagcgcgaagtcagcaagaaagtgtccacgaaacagaagaaacgcagtacagag
cttcttcgcttaattgatctggacttctcgatgacggtgtctctgttggatctgccacca
gtgaatgaatatgaaatgtatatcagagcctttggaactgagaacactaagcaggcgtac
gttcagtgcaatgaggacaatgccgatagagacatccagacagaggagatagaggtgtgt
gagaagtggacgcagcatcctccagagcacaatggagcctcgggggatccaaagctctcc
catgaagcccgaaacaagagtgaaatgaactttgattcgcagcgtctgacagcgttcctg
cgctcggcctctcaggtcatggttgtcctgttggaggaggatcgagctgagaggagatcc
ctgaggaagccgaggtctcaaacagacacgccgtctttcagcgacggaagtttacagctc
aacactaatttgtcttttctttatggtcgccgcatcagcctggtgcacttctctgaggtg
cagaggcacaccatgatgtcggtccacggcccgacaacgacgcccagcgctgtacgtctt
gacagctgcaccatcatctgcatctggaacatttgggagccttccagacctcaaaaagtc
ctcgtctaccaatccgaggtgcagtgttgttgcttcagccctggaaaagccatcctggtg
tttgcaggtacgtcagtgggctccgtggtgctgtgggacctgagggagcgcgccactgac
cactactgcctgaagataggggacggtgaatggactttccgacagcctaccttctccact
gatggagtgatggccggctcgagacatctttcatctgtgacatctgtagaagtcgtcccg
tccacggcaccgggcggcctgaggccagaggtcccccttctggcatccgaggaagagtcg
tcgggattgtcattccagctggcttctctggatgaaatggggcttttgaatttctgggtg
gtggtgcaactcccaaaagccaacgaggccggctctccaactgatctagggctcaggcct
ggcggaaaagtcaagttacttcacagctcccgcctcctcactgctgagagggcgtcgcga
cgagacgccgcaaaaacggggccgttacagacgctacttttgaaattccttccaaccgac
tccaatcatttcttcatcggcaccaacatgggtctggtcaatcatgagacaagtcacggc
ttaaaggctccgccaaagttttacaggttccaggaagccggagtacgacttatcgatgtc
acctctatccacttttctccattcaggcaacacttgttcctggtgggttgtggggacggc
agcatcaggctgcatgaggtcagccgtgagcaccctgtggcccagtggaggagcggtacc
gctggggaaccggtggtctcgctgcagtgggcccaaaccagaccgacggtcttctgtgtg
ctcgacggcgcctccacgatccacatatgggacctgctggaaagcgacgcacagcctgtg
gtcaccgaaaggatggactcggacagggtgaccgccatggccgtgtttggagactcggga
caacaaaacacatattcaggaatagcacttgcacacgagtcaggaaagatagaaatgcag
tatttcacgaaagcttttactgtgcccactgctgcagaagaggagaagctggagagtctg
gcgaccgacgccttctga
DBGET
integrated database retrieval system
