Pseudoliparis swirei (Mariana hadal snailfish): 130206558
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Entry
130206558 CDS
T09868
Symbol
cdh7a
Name
(RefSeq) cadherin-7a
KO
K06799
cadherin 7, type 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130206558 (cdh7a)
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Major cadherins
130206558 (cdh7a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
DUF3147
Cadherin_4
Stevor
Motif
Other DBs
NCBI-GeneID:
130206558
NCBI-ProteinID:
XP_056290561
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All DBs
Position
16:6209603..6312123
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AA seq
800 aa
AA seq
DB search
MGWCCSGLCGALALVALLCPPGERGCCWGLEPSSGDPETSPHSDPDPREALQRHKRSWVW
NQFFVLEEYTGNEPLYVGKLHSDVDKGDGKVKYVLSGEGSASIFTIDENTGDIHATKRLD
REAQAYYTLQAQAVDRVTNVPVEPRSEFVVKVQDINDNEPKFLDGPYLAGVPEMSPLGTM
VVQVAATDADDPTYGNSARVIYSIIHGQPYFSVEPKTGVIRTALPNMDRETRDQYVLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFTHKNYQYTVPESLPVQSAVARIKAADADI
GSNAEMDYRIMDGDGPAMFNITTEESTQDGVIILLKPLDFETKSSFSLRIEATNRNIDSN
FLSAGPFSDTTSVRLTVEDVNEPPVFSTPLGRMVVSEDARVGTSIGRVSAHDPDTSSNAI
RYSIDRNTDLERFFNVDALSGVISTAKPLDREANLIHNLTIFAIESQDPTQIGKGIALIT
VQDINDNAPVFAIDYETILCENAMPGQVIQTVSAVDKDEPLSGHRFYFALAAAVVGNLNF
TLRDNKDNTASVLTKRGGFRRREQLVYRLPVLIVDSGSPALSSTNTLSVRVCDCDSDSVA
LSCGAVASTATGLSTGALVAILGCIITLLVMVLLIVTMRRRRKAPLILEEERDIRENIVR
YDDEGGGEEDTEAFDMVTLRNLNVIRDPGVRRDVTPDTPTFFRYSSSGRPSYKSLPDNVV
FREFIWERLKDADVDPSAPPYDSLQTYAFEGSGSAAESLSSLESLSTDSDQNYDYLSSWG
PRFKKLADMYGNGDGAAVFS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggggtggtgttgctcaggcttatgcggagccctggctctcgtggcactcctgtgtccc
ccgggggagcggggctgctgctgggggctggagcccagctctggggacccggagacgtcc
ccgcactctgatccagacccccgggaggccctgcagaggcacaagcgcagctgggtgtgg
aaccagttcttcgtattggaggagtacacaggaaatgagccactttacgtgggcaagctg
cactcggatgtggacaaaggggacggcaaggtgaagtatgtgttatctggcgagggctcc
gcctccatcttcaccattgatgagaacacgggggacatccacgccacgaagcgcctcgat
cgagaggcgcaggcctactacaccctccaagctcaggctgtggacagagtcaccaacgta
cccgtggagccccggtctgaatttgtggtcaaggtccaggacatcaacgacaatgagcca
aagtttctggatggaccgtacttggccggagtaccagagatgtcacccttaggaaccatg
gtggtgcaagtggcagccacagatgcagatgacccgacgtatgggaacagtgccagggtg
atttacagcatcatccacggacagccgtacttctccgtggagcccaagacaggcgtcatc
agaaccgctctgccgaacatggaccgcgagacgagggaccagtacgtgctcgtcatccag
gccaaagacatggtgggccagatgggcggcctctccggcaccacctccgtcaccgtcacg
ctcaccgacgtcaacgacaaccctcctcgctttactcacaaaaactatcagtacacggtg
ccggagtcactgccggtgcaatcggcggtggccagaatcaaagcggccgacgcggatatc
ggctccaacgccgagatggattacaggatcatggacggagacgggcccgccatgttcaac
ataacgacggaggagagcacgcaagacggggtcatcattctcctgaagcctctcgacttt
gagacgaagagcagcttctctctaagaatcgaggccacgaacaggaacatcgactccaac
ttcttgagcgcgggcccatttagcgacaccacgtcggtcaggttgacggtggaagacgtg
aacgagccgcccgtcttttccacgccgctcggcaggatggttgtttcggaagacgcccgg
gtgggcacctcaatcgggagagtctccgcccacgacccggacacctccagcaacgccatc
aggtactccatcgacagaaacacagacttggagcgcttctttaacgtggacgctctaagt
ggggtcatcagcacggccaagcctctggaccgagaggccaacttgatccataacctcacc
atcttcgccatcgagagccaggatccgacccaaattggaaaaggcatcgctctcatcacc
gtgcaggacataaacgacaacgctccggtcttcgccatcgactatgagaccatcctctgt
gagaacgccatgccgggacaggtgatccagaccgtcagcgcggtcgataaggacgaacct
ctgagcggacaccgcttctatttcgccctggccgcggccgtcgtcggcaacctcaacttc
accctgcgtgacaacaaagacaacacggcgtcggtgctgacgaagcgcggcggtttccgg
cggcgggagcagctggtgtaccggctgcccgtgctgatcgtggacagcggaagccccgcc
ctcagcagcaccaacacgctgtccgtgcgcgtgtgcgactgcgactccgacagcgtggcc
ctgtcctgcggcgccgtggcctccaccgccaccggcctgagcaccggcgccctcgtggct
attctgggctgcatcatcacgctcctggtgatggttctgctcatcgtgacgatgcgtcgg
cggaggaaggcgcctctgattctcgaggaggagcgcgacatccgagagaacatcgtgcgc
tacgacgacgagggcggcggcgaggaggacacggaggccttcgacatggtgaccctgcgc
aacctcaacgtcatccgggaccccggcgtccggcgggatgtcacgccggacacgcccacc
ttcttccgctactcgtcgagcggccgcccgtcctacaagtccctgccggacaacgtggtg
ttccgggagttcatctgggagcgcctcaaggacgccgacgtggacccgtcggcgccgccg
tacgactcgctgcagacgtacgcgttcgagggcagcggctcggcggcggagtcgctgagc
tctctggagtcgctgagcacggactcggatcagaactacgactacctgagcagctggggg
ccgcgcttcaagaagctggccgacatgtacggcaacggcgacggcgccgccgtcttctca
tag
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