Pseudoliparis swirei (Mariana hadal snailfish): 130206586
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Entry
130206586 CDS
T09868
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130206586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130206586
03036 Chromosome and associated proteins [BR:
pswi03036
]
130206586
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
130206586
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
130206586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
130206586
NCBI-ProteinID:
XP_056290607
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Position
16:318716..341672
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AA seq
414 aa
AA seq
DB search
MNSTTAGSASNKCLDAEVGIAVCPRAAVELAKAPFLGSPAWSGPRAPPNGWSPKPTNAEA
GVVVCPRAAVVLAKVCHLQVHFDGWSQQFDFWSDSDHLDLHPVGWSQCTGHLLEPPPGSS
PTSPSQGGCPTRGCRGVGHIKGAKYSGHHSAFGCPYSDINMRKEVLLPDRLGGERVITLV
PVSMYHHGNQSLRLPRPSQPTKFLCVKQEEEELHITPETDDEVAVSMETARHDNCAVGCD
GLRALGSRDACLTAQWAAESLHQSVFLSAMSPQPGRDLSHSDLSHSLCWEQQRKLLPGVW
GVQAETVQHWSAQQVSDFIESLPGCEEQAKQFRDEQIDGRAFLLLSQRDIVRIMSIKLGP
ALKIYNSILIFRHAQDQSQSDAQDQSQSDAQDQSQSDAQDQSQSDAQDQSHQTL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacgaccgcggggtctgcttcaaataaatgtctcgatgctgaggtgggcatc
gccgtctgccctcgggcagcggtggagctcgccaaggcgcccttcctgggcagtccagcc
tggtccggtccccgggcccctcccaacgggtggagcccaaaacccacgaacgccgaggcg
ggtgtcgtcgtctgccctcgggcagcggtggtgcttgccaaggtgtgtcacctgcaggtc
cactttgacggctggtctcagcagtttgacttctggagcgacagcgaccaccttgacctc
catcctgtcggctggtctcaatgcacaggacacctgctggagccccccccaggctcctcc
cctacgtctccctctcagggcggctgtcccacacgaggctgccgaggagtcggacacatc
aaaggagccaaatacagcggacaccacagtgccttcgggtgtccgtactcggacattaat
atgcgtaaggaggtgctgcttcctgataggctgggaggagagcgagtcatcaccctcgta
cctgtctccatgtatcaccacggcaaccagtcactaaggttaccacgaccgtcccaacca
accaaattcctctgtgtgaaacaggaagaggaggagcttcacataactccagaaacagac
gatgaagtggctgtttccatggagacggctcgccatgataactgtgccgttggttgtgat
ggactacgggctctgggctcacgtgatgcctgtctcactgctcagtgggcagcagagtcc
ctccaccagtctgtcttcctgtcggccatgtcgccgcagcccggccgcgacctgtctcac
tctgacctgtctcactctctatgctgggagcaacagcgcaaactgctgccgggcgtctgg
ggagtccaagcggagacggtccaacactggagcgcccagcaggtgtctgacttcattgag
tctcttcctggttgtgaagaacaggccaaacagttcagagacgagcaaatcgatgggcgg
gccttccttctcctctcccaacgggacatcgtcaggatcatgtcaataaaacttggtccc
gccctcaagatctacaactccatcctgatcttcagacatgcccaggaccagagccaatca
gacgcccaggaccagagccaatcagacgcccaggaccagagccaatcagacgcccaggac
cagagccaatcagacgcccaggaccagagccatcagactctttga
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