Pseudoliparis swirei (Mariana hadal snailfish): 130206706
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Entry
130206706 CDS
T09868
Name
(RefSeq) ATP-binding cassette sub-family F member 2-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130206706
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
130206706
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_28
AAA_16
AAA_33
VapE-like_dom
NACHT
AAA_14
Dynamin_N
AAA_15
AAA_23
RNA_helicase
MukB
DUF7365
Motif
Other DBs
NCBI-GeneID:
130206706
NCBI-ProteinID:
XP_056290764
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Position
16:complement(7111323..7117273)
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AA seq
611 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKNRQRTKKTDEDEEGDQPETQLNVAQSNGIVHLTKELDEFELA
KTEARAVTGVLSSHPNSTDVHVTSLSLTFHGQELLADTSLELNSGRRYGLIGLNGTGKSM
LLSAIGHREVPIPEHIDIYHLSREMAPSEKTALYCVMEVDEQRIMLEKEAERLAHEDSEC
EKLLELYERLEELDADKAEVRASRLLHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIK
PFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLVSHSQDFLNGVCTNIIHLNLKKLKNY
TGNYDQYVKTREELEENQMKRFNWEQDQITHMKNYIARFGHGSAKLARQAQSKEKTLQKM
VASGLTEKVESDKTLSFSFHPCGKIPPPVIMVQNVSFKYSDDTPHIYKNLEFGIDLDTRV
ALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKC
YPNIKEKEDMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHLLFLDEPTNH
LDIETIDALGDAINEFEGGTILVSHDFRLIQRVAQEIWVCEHQTITKWNHDILAYKEHLK
KKLEKAKVHGI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgacttagccaagaagaaggcagcaaagaagaaggaggctgccaaaaatcgc
cagcgtaccaagaaaactgatgaggatgaggagggtgaccagccagagactcagcttaat
gtagcacagagcaatggtattgtccatttgacaaaggagctggatgaatttgaactggcg
aagactgaggcacgggcagtgaccggtgttctgtcctcccacccgaacagcacggatgtc
cacgtaaccagcctgtcgcttaccttccatggccaagagctgcttgcagacacaagcctg
gagctcaactcgggcagacgctatggtctcattggccttaatggcacagggaaatccatg
ctgttgtcagccatcgggcatcgtgaggtccccattccagagcacatcgatatttaccac
ttgtcccgagagatggcccccagcgagaagaccgctctgtattgtgtcatggaggtggat
gaacagaggataatgctcgagaaggaagcggagagactggcccatgaggactccgagtgt
gagaagctgttggagctgtatgagcgtctggaggagctggatgctgacaaggcagaggtg
cgagcttcccgtcttctccacggcttgggttttacccctgctatgcagcggaagaaactc
aaggacttcagtggaggatggaggatgcgcgtcgctctggccagagccctgttcatcaag
cccttcatgttgttactggatgagcccactaaccacttggatctggatgcttgtgtgtgg
ctggaggaggagctcagtcagttcaagcggatccttgtgcttgtctcacattctcaagac
ttcttgaatggtgtgtgcaccaacatcatccacctgaatttgaaaaaactgaaaaactac
acgggtaactatgaccagtatgtgaagaccagagaggagctggaggagaaccaaatgaag
cgtttcaactgggaacaggaccagattacacacatgaagaattacattgccaggtttggt
cacggctctgcaaagctcgcccgacaggcacagagcaaagagaagacgctgcagaagatg
gtggcctcaggcttgactgaaaaagttgagagtgacaagactctgtcattttcatttcat
ccctgtgggaagattcctcctcctgttatcatggttcagaacgtgagcttcaagtacagc
gacgacacaccgcacatatataaaaacctggagtttggcatcgacttggacacacgagtg
gctctggtggggcccaacggagcagggaagtccacactgctgaagctgctgatgggagag
ctgctacccaccgatggcatgatccgcaaacattctcacgtcaagatcggcagatatcac
cagcatctgacggagcagctggaactggacctgtctcctctggagtacatgatgaagtgt
taccccaacatcaaagaaaaggaggatatgaggaagatcatcggtcgctacgggctgacg
ggaaaacagcaggtcagtccgatcaggaacttgtccgacggtcaaaagtgccgggtgtgt
tttgcctggctggcttggcagaaccctcacttgttgttcctcgacgagccgaccaatcac
ttggatatcgagaccatcgacgcgctgggagacgccatcaatgagtttgaagggggcacg
attctagttagccacgacttcaggctaatccaacgggtggctcaggagatctgggtatgc
gagcatcagaccatcacaaagtggaatcatgacatcctggcatacaaggagcatttgaag
aaaaagctggagaaggcgaaggtgcatggcatctaa
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