Pseudoliparis swirei (Mariana hadal snailfish): 130206707
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Entry
130206707 CDS
T09868
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130206707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130206707
03036 Chromosome and associated proteins [BR:
pswi03036
]
130206707
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130206707
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130206707
PBAF complex
130206707
GBAF(ncBAF) complex
130206707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
130206707
NCBI-ProteinID:
XP_056290765
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Position
16:complement(7124497..7157858)
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AA seq
508 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSTALEPSRKRPASSQQGQQQQQGAQSRSRKKPVGFPGANEIPARQMDMKEPQSDPTLGS
NAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKR
KLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELDKE
LYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGI
HTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLP
PDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEIASLDNKIHET
IESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYNEPWS
QEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcccggcatgccgtctggagcgaggatgccccaccaggga
gcgcccatgggcccccccggcccaccgtacggcgggagcccggcggtgcggcccggcctg
ccctccaccgcgttggagcccagccgcaagaggcccgcctcctcccagcagggccagcag
cagcagcagggggcccagagccggtccagaaagaagccagtcggattccccggagccaat
gagatcccggcgaggcagatggacatgaaagagccccaatcagatcccacgctcggatca
aatgctaagagaaggaaaatggcagacaagattcttccgcaaaggatccgtgagctggtc
ccggagtctcaggcctacatggatctgctggcgtttgagcgtaagctcgaccagaccatc
atgcgcaaacgtgtggacatccaggaagccctgaagagaccgatgaagcagcagaagcgt
aaactgaggctttacatctccaacaccttcaacccggcgagacccgacgccgacgactcc
gacggcagcatcgcatcgtgggaactgcgagtagaggggaagttgctcgacgacccgggg
aagcagaagaagaagttttcttctttttttaagagcctggtgatcgagctggacaaagaa
ctctacggccctgacaaccacctggttgagtggcaccgcacgcccaccactcaggagacg
gacggcttccaggtgaagaggccgggcgacgtgagcgtgcgctgcactctgctgctgatg
ctggactaccagcctccccagttcaagctggaccctcgcttggctcgcctgcttggcatt
cacacccagactcgctcctgcatcatccaggccctgtggcagtacgtcaagaccaacaag
ctgcaggactcccatgacaaggagtacatcaactgtgacaagtacttccagcagatcttt
gactgccctcggctgaagttctctgagatcccgcagcgcctcaccaacctcctcttaccc
cccgaccccatcgtcatcaaccacgtcatcagcgtggatcccaacgaccagaagaagacg
gcctgctacgacatcgacgtggaggtggaggaccccctgaagggccagatgagcagcttc
ctcctctccaccgccaaccagcaggagatcgcctccctggacaacaagatccatgagacc
atcgagtccatcaaccagctgaagatccagagggacttcatgctcagtttctccagagat
cccaagggctacatccaggactggctcaaatcccagagccgagatcttaagttaatgacg
gacgtggtcgggaaccccgaggaggagaggagggcggcgttttacaacgagccgtggtcc
caggaggccgtaagccgctacttctactgcaagatccagcagaggagacaggagctggaa
caggccttagctgtccgcaacacctaa
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