Pseudoliparis swirei (Mariana hadal snailfish): 130206721
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Entry
130206721 CDS
T09868
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130206721 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130206721 (u2surp)
Spliceosome [BR:
pswi03041
]
Complex A
U2 snRNP components
U2 related factors
130206721 (u2surp)
Complex B
130206721 (u2surp)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
SET_assoc
CTK3
RRM_7
Motif
Other DBs
NCBI-GeneID:
130206721
NCBI-ProteinID:
XP_056290797
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All DBs
Position
16:complement(9044284..9055627)
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AA seq
965 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSFGKMSVAKRTLSKKEQDDLKKKEDERAAAEIYEE
FLAAFEGDGEGKAFVRGGIANASKEEAAADEKKGKLYKPKSRFENQPKSFLPLETPTQFL
PIDKRHSVKKTTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLSGTDGRRSA
DGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKI
MWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIYI
PPSMMEHTLPPPPSGLPFNAQPRERLKNPTAPMLPPPKNKEEFEKTLSQAIVKVVIPTER
NLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKIYTILQGEA
PVKWKTEDFRMFKNGSLWHPPPLNPYLHGPYDDGEEEEEDEEGIRKGSLKEDERDKLEEM
LRGMSPRRGDIAEAMLFCLGRAEAAEEIVECVAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVSNASYYRKFFETKLCQIFADLNATYKSIQGHLQSENFKQRVMACFRAWEDWAVYPD
PFLIKLQNIFLGLVNIAAEKEPPVVIEEAEPAEDIDGAPIGDYGDGALLEDVDGVPIDAG
PIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDPSKEATFKVAPSKWEAVDEAELQAQAV
TTSKWEAFEQPEETKRDEEDSDYEDRSPRSDDNQSYSNPIREDSDVKVKMSEMNEEKRTK
LREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLEREKEKEKKEK
EKAEARLKDLKKEKEKDDTLTRKERKRRHSGSPSPTRSSTRRGRSSSPRSERSDRSYSKD
TSSRSAHKDSPRASNKKSSKRSPSPRTPKRSRRSRSKTPKKSAKKSRSKSKSPHRSHKKS
KKSKH
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgaacgcctggtggctctcagaaagctagcgcgaaggcgttgcttgagagc
aaattgaagtcattcagctttggcaaaatgtcagtggcaaagaggaccctaagcaaaaaa
gaacaagatgatttaaagaaaaaagaggatgagcgggcagcagcagagatttacgaggag
tttcttgctgcttttgaaggagatggggagggcaaagcctttgtccgtggtggtattgca
aatgcatcaaaagaggaggctgctgcggatgagaagaaaggaaaattgtacaagcccaag
tcgcgtttcgagaaccaaccgaaaagctttttgcctttggaaaccccaactcagttttta
ccaatagacaaaagacattctgtgaagaaaactactgagaaggaaaagaagaagagcaac
ttggagctcttcaaagaagaacttaaacaaatacaagaagaaagggatgaaagacacaag
ctgaaaggacgtgttagtcgcttcgaacctctctcgggcacggacggaagacgctcagcg
gatggttcttcaagaagaaaccgtccgtcaagtgttttggatgattgtgcgccgggttcc
catgatgttggagacccatccactaccaacttgtatctcggaaacatcaatccccagatg
aatgaggagatgctgtgtcaagagttcggccgttatggtccgctggccagtgtgaagatc
atgtggccgagaaccgacgaggagagggctcgggagaggaactgtggttttgtggctttc
atgaacaggagggatgctgagcgagcactcaagaacctaaatggaaagatgataatgaac
tttgagatgaaattaggatggggcaaaggtgtacccatcccaccccaccccatctacatc
cctccttccatgatggagcacacactcccaccacctccctctggcctgcccttcaatgca
cagccccgggagaggttaaagaaccccacagctcccatgcttcctccacctaaaaacaag
gaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaagg
aatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggcccaatgttt
gaagccatgatcatgaacagagaaatcaacaatcctatgtacaggtttctgtttgagaac
caaagcccagcacatgtgtactaccgctggaagatctacaccatactacagggtgaagcg
ccagtcaaatggaaaacagaggactttaggatgtttaagaatggctccttgtggcatccg
cctcctcttaacccatacctccatggtccgtatgatgatggtgaggaagaggaggaagat
gaggagggcatcaggaaaggcagcttgaaagaggacgagcgagacaaactcgaggagatg
ctgcgtggaatgagtcccaggaggggagacatcgcagaagccatgttgttttgtctcggc
cgcgccgaagccgctgaggagatcgtggagtgcgtcgcagagtctctctccatcctcaag
acgcctcttcccaagaagattgcccggttatatctagtttctgatgtgctgtacaactca
tctgccaaagtatccaatgcgtcctactacagaaagttttttgagacaaagctctgccag
attttcgctgacctcaacgcaacatacaaatcgatacagggccatcttcagagtgagaac
tttaagcaacgagtcatggcgtgtttccgggcctgggaggactgggccgtgtaccccgac
cccttcctcatcaagctgcagaacatcttcctggggctcgtcaacatcgctgcagagaag
gaaccccctgtcgtcattgaggaggctgagccggcagaggacattgacggggctccaata
ggggactatggagatggagctctgctggaggatgtggacggggtgccgattgacgccggg
cccattgatggagctcctattgacggagcccccctggatgaccttgatggtgttcctatc
aagccaatggaagaggacatcgatgggatacctttggatccgtccaaagaggcgaccttc
aaagtagcaccttccaaatgggaggcggtggatgaggcggagttacaagctcaagctgtg
acgacttctaaatgggaagcatttgagcagcctgaagaaacaaagagggatgaggaggac
agcgattatgaggacagaagccctcgctccgatgataaccagagctactccaaccccatc
agagaggactcggatgtcaaggtcaaaatgtctgaaatgaatgaggagaaacgcacaaag
ctcagagaaatagaggttaaggtcatgaagttccaggacgagctggagtctggaaaaagg
cccaagaagcctgggcagagtattcaggagcaggtggagcactacagggacaaattacta
caaaaggaaaaggaaaaagagaaacttgaacgagagaaagagaaggagaagaaagagaag
gagaaagcagaggcccgtttgaaggatttgaagaaggaaaaagaaaaggacgacacgctg
accaggaaagagaggaagcggcgtcacagcgggtcacccagcccaacaaggagcagcacc
cgacgaggccggtcatcctcaccccgctcagagcgctcagaccgctcgtactctaaagac
acgtcgtcccgctccgcccacaaagactccccgcgagccagcaacaaaaagtcctcaaag
aggtcaccctcacctcgcacacccaaacgatccaggaggtcgcgctccaagacgcccaag
aaatcggcaaagaagtcccgctccaaatcaaagtcacctcaccggtctcataaaaaatca
aagaagagcaaacactga
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