Pseudoliparis swirei (Mariana hadal snailfish): 130206751
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Entry
130206751 CDS
T09868
Symbol
sdccag8
Name
(RefSeq) LOW QUALITY PROTEIN: serologically defined colon cancer antigen 8 homolog
KO
K16488
serologically defined colon cancer antigen 8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130206751 (sdccag8)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130206751 (sdccag8)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130206751 (sdccag8)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130206751 (sdccag8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
Mating_N
ATG16
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
130206751
NCBI-ProteinID:
XP_056290821
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All DBs
Position
17:17492880..17535880
Genome browser
AA seq
701 aa
AA seq
DB search
MKPVDSDEEDAQQLGAYQKELRQRANQSIQQLSSALEQLSSDGEEVEEPRGRDGSLFADV
AEEDTAAWSQKTQSEAVNQLKSLLLKQGRDISSPLTTSKKQSPSKRVQQEGRSNLPAFQD
LVPMIHNQSDYIQHLEAEVKLCKEELHEMKQRIRVVVVENEKFHSELKSKAMDESLKEYT
IHNSMVTGSLAANNHSMLHTSELSTWKNELEQFKVIYQAQIESLEAQVISLRKDLSVSQK
ECEEVKDRLRHREKQAADALRADGAPRVAGLCLNCAQHEAVLAGTHTNLHVQTIDRLKKE
RDELLVALRAVRASQQEAQQREWSACLQVKQAVEMAEEANLYKARVEVQSEQLSRELARL
REQLEREAHAFKERLAEAREEGRAEARKQREELAQTVSSLSQHVAELEGELDRAHRDRSS
LTSQLEDTLRQLTSQEQHNTQMCVDLRYQLSQAQLKKEEAERELRELNSKSSRRMEKAAQ
EVERLSSELVGCRQHLEVVQKDGSQWQAEALSLAEQLANAQRQLHLTRQDRESSERAHKE
EMVSATLSARDRXRELALLLQQTEAQQQQRVGELDGLLSSQNSLLRRLKEECCGLGVKLE
ELTESSGGALEQLALEKQHLVETVKGLRARCSDMEDQCVQHGRMHQRMKNRLQQLDRHCQ
SSAQQVYELLAKQNQLMQERNTLTEEMQSLHMERRVNTVST
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggttgactcagacgaggaggacgcgcagcagctgggcgcttaccaaaaggag
ctgagacagcgggccaaccagagcatacagcagctaagcagtgctttggagcagctgagc
tctgatggagaagaggtggaggagcccagaggcagagacggcagcctcttcgccgacgtg
gccgaagaggacacggctgcatggagccaaaagacacagagcgaagcagttaatcagctg
aagagccttctgctgaagcagggcagagacatttcctctcccctcactacttcaaagaaa
cagtctccatccaagagagtacagcaggagggacggtccaacttgcctgcttttcaggat
ttggtaccaatgattcacaaccagtcagattacatccaacacctggaagctgaagtcaaa
ttgtgcaaggaggagctgcatgagatgaaacagcgaatcagagtggtagtggtggagaat
gagaagtttcattcagaactcaaatccaaagctatggatgaatcactgaaagaatacaca
atccacaactctatggtgactgggagtttggcagccaacaaccacagcatgctgcacaca
tcagaactcagcacatggaaaaatgaactggaacaatttaaagtgatctaccaggcccag
attgaaagcttggaggctcaggtcatctccctcaggaaggatctgtcagtcagtcagaag
gagtgtgaggaggtgaaggatcgtctgagacaccgggagaaacaggctgcagatgcactg
agagctgatggagctcctcgtgtggcaggattgtgtctgaactgtgctcagcacgaagct
gtgttggctggaactcacacaaacctgcatgtccagactattgacagactcaaaaaggag
cgcgatgagttactggtggctctgcgtgccgtgcgagctagtcagcaggaggcccaacag
agggagtggtcagcctgtctccaagtgaagcaggctgtggagatggctgaagaagcaaat
ctgtacaaagccagggtggaggtgcagagtgagcagctgtccagggagctggcccgactt
cgggagcaactagaacgagaagcacatgccttcaaggagagactggctgaggcccgagag
gagggccgggctgaggcccgcaaacagagagaggagctggcacagacagtgtccagcctc
tcccagcatgtcgctgaattggaaggagagctagacagagctcacagagacaggagctca
ctgaccagtcagctggaagatactcttcgccaacttaccagccaggaacaacacaatacc
cagatgtgtgtggatcttcgatatcagctcagccaggcccagctgaagaaagaagaggca
gagcgagagctccgagagctcaacagcaagagcagccgacggatggaaaaggctgcgcag
gaagtggaaaggctgagctcagagctggttggctgtcggcagcatctggaggtggtccaa
aaggacgggagccaatggcaggccgaagccctgagcctagcagaacagctggcaaatgcc
cagcgccaactgcacctcaccagacaggacagagagagttcagaacgagctcacaaggag
gaaatggtgtctgcgaccctttcagcgcgggatcggnngagagagctggctttgctgctg
cagcaaacggaggctcaacagcagcagagagttggagagttggacggtcttctgagttcc
cagaattccctgctcaggaggctgaaggaggagtgctgcgggctgggagtcaaattagaa
gaactaacagaaagtagcggcggagcactggagcagctggccctggagaagcaacacctg
gtggagacggtgaagggtctgagagctcgttgctccgacatggaggatcagtgtgtccag
cacggccgcatgcaccagcgcatgaaaaacaggctgcagcagttggaccgtcactgtcag
agcagtgcccagcaggtgtatgagctgctggccaaacagaaccagctgatgcaggagaga
aacacgctcactgaggagatgcaaagccttcacatggagagacgagtcaatactgtgtcc
acatga
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integrated database retrieval system
