Pseudoliparis swirei (Mariana hadal snailfish): 130206772
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Entry
130206772 CDS
T09868
Symbol
cdh11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130206772 (cdh11)
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Major cadherins
130206772 (cdh11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_2
Cadherin_pro
ASFV_J13L
DUF443
Motif
Other DBs
NCBI-GeneID:
130206772
NCBI-ProteinID:
XP_056290862
LinkDB
All DBs
Position
17:complement(22738213..22822323)
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AA seq
822 aa
AA seq
DB search
MAILPMKRRGLGPLRAFLVLLGISALCGAALGTRRGNASLDQRGHRHRHPGHVSLHRHRQ
RDGKEGQVLHRSKRGWVWNQFFVIEEYSGPDPVLVGRLHSDVDSGVGSIKYILSGEGAGT
IFVIDDKTGNIHATKTLDREEQAQYTLTAQAVNRDTNKPLEPPSEFIVKVQDINDNPPEF
LHGPYYARVPEMSNVGTSVMQVTATDADDPTYGNSARLVYSILQGQPYFSVESQTGIIRT
ALPNMDREARQEYDVLIQAKDMGGHMGGLSGTTQVKITLTDVNDNPPKFPQSVYSMSVSE
DKVPGEEVGRLKAKDPDLGDNGMVTYRLVDGDGLGLFELSTDSETREAVIKLKKHVDFET
KRSYTLKVEGSNPYIDPQYIAWGPYRDHATIKISVEDADEPPAFVAPSYTFEVAENAPEG
TQVGRVHAKDTDVANNPVRYMIPLYTDIEQFFSINTDNGMITTTRPLDREAQAWHNISVS
ATEIGGHHQDTKVRVNIKVRDVNDNAPEFATNNEVLMCETVAPGKVIETLSAVDKDVMAH
RQHFSFSFAPEVTHNHNFSLKDHGDSTASVYVLRKGFSRLTQDVYFLPVEISDNGFPALS
STSTLTIRVCSCDSRDVILSCNVEPYVLPAGLSTGALIAILACIVILLAIVVLFVALRRQ
KKEPLIVFEEEDIRENIITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQFP
IRPGSAGHTGPNSVDVDDFIKTRIAEADGDPTAPPYDSIQIYGYEGRGSLAGSLSSLESV
TTESDLDYDYLQSWGPRFKKLADLYGIKDCFVDDDDDDEENS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctgccgatgaagaggcggggcctcgggccgctgagggccttcctggtgctg
ctgggaatctcagcactctgcggcgcggcgttgggaacccggagaggaaacgcgtccctg
gaccagaggggccacagacacagacatccaggtcatgtgtcgctgcaccggcaccggcag
agggacgggaaggaggggcaggttctgcacaggtccaaacgaggatgggtctggaatcag
ttcttcgtcattgaggagtacagcgggccggacccggttctggtgggcaggctccactcg
gacgtcgactcgggcgtcggcagcatcaagtacatcctgtcgggcgaaggcgcgggaacc
atcttcgtcatcgacgacaagacgggcaacatccacgccaccaagacgctggaccgcgag
gagcaggcccagtacacgctgacggcccaggccgtgaaccgggacaccaacaagccgctg
gagccgccgtccgagttcatcgtgaaggtccaggacatcaacgacaacccgcccgagttc
ctccacgggccgtactacgccagggtgcccgagatgtccaacgtcggtacgtcggtgatg
caggtcacggcgacggacgccgacgacccgacctacggcaacagcgccaggctggtgtac
agcatcctgcaaggacagccgtacttctccgtggagtctcagacgggcatcatccggacg
gccttgcccaacatggaccgcgaggcccggcaggagtacgacgtcctgatccaggccaaa
gacatgggcggccacatgggggggctgtcgggcaccacgcaggtcaagatcacgctcacc
gacgtcaacgacaacccgcccaagttcccccagagtgtgtactccatgtcggtgtcggag
gacaaggtccccggcgaggaggtgggccgcctcaaggccaaggaccccgacctgggggac
aacggcatggtgacctaccgcctggtggacggagacgggctgggcctcttcgagctgagc
accgactccgagacccgggaggccgtcatcaagctgaagaagcatgtggactttgagact
aagaggtcatacacgttgaaggtcgaggggtcaaacccttacatcgacccccagtacatc
gcttggggcccctatagggaccacgccacgataaagatatcggtggaagatgcggacgag
cctccggcgttcgtggcgcccagttacacgttcgaggtggcggagaacgcacccgagggc
acccaggtgggacgggtccacgccaaggacacggacgtagccaacaaccccgtcaggtac
atgatcccgctctacacggacatcgagcagttcttcagcatcaacacggacaacggcatg
atcaccacgacgcggccgctggaccgcgaggctcaggcctggcacaacatctccgtgtcg
gccaccgagatcggaggtcaccaccaagacaccaaagtgcgcgtcaacatcaaagtgaga
gacgtgaacgacaacgccccggagttcgccaccaacaacgaggtcctgatgtgtgagacc
gtcgccccggggaaggtcattgagacgctcagcgcggtggataaagacgtgatggctcac
cggcagcacttctccttcagcttcgcccccgaagtcacgcacaaccacaacttctccctc
aaagaccacggagacagcacggccagcgtctacgtgctgcgtaagggcttcagccgcctg
acccaggacgtgtacttcctgccggtggagatcagcgacaacggcttcccggcgctgagc
agcacgagcacgctgacgatccgcgtgtgctcgtgcgacagcagagacgtcatcctgtcc
tgcaacgtggagccctacgtgctgccggccggcctcagcaccggggcgctcatcgccatc
ctggcctgcatcgtcatcctgctggccatcgtggttttgttcgtggcgctgaggcgtcag
aagaaggagcccctgatcgtgttcgaggaggaggacatcagggagaacatcatcacgtac
gacgacgagggtggcggcgaggaggacacggaggccttcgacatcgccacgcttcagaac
ccggacggcgccaacggcttcctgccgaggaaggacatcaagccggagctccagtttccc
atcaggcccggcagcgccggccacacggggcccaacagcgtcgacgtcgacgacttcatc
aagacccggatcgcggaggccgacggcgacccgacggcgcccccgtacgactccatccag
atctacggctacgagggccgggggtcgctggccgggtcgctgagctccctcgagtccgtc
accacggagtccgacctggactacgactacctgcagagctgggggccccggttcaagaag
ctggcggacttgtacgggatcaaagactgcttcgtggacgatgacgacgacgacgaggag
aactcttaa
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