Pseudoliparis swirei (Mariana hadal snailfish): 130206797
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Entry
130206797 CDS
T09868
Symbol
rrp12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130206797 (rrp12)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
90S particles
Other 90S particles
130206797 (rrp12)
Pre-60S particles
Other pre-60S particles
130206797 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
130206797
NCBI-ProteinID:
XP_056290927
LinkDB
All DBs
Position
17:complement(12571149..12585584)
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AA seq
1298 aa
AA seq
DB search
MVKSGKLRSGTGSKLKRWKKGHSSDSNPETSRHRQAAKSRFFSRPTGKSDLTVDALKLHN
DLQVGPLELGGRKNACMEEEPNEGFSERTSGTFLSGLSDCSNLTFRNVQRYWESNSAAHK
EICAVLAAVTEVIRSRGGKETETEYFAALMTTLEVVDSAESQAAVAYLLNLVMKRVPVPV
LMSKFSDTTKALMEIMSKQAMFETSSALRWILSCLATLLRKQDATVWTYPSTVQAYHGLL
SFTVHSKPKLNFMSCFSSQVRKAAQQGVCSILRGSDFLFTDDAPTHHPAAATTAKFCMKE
MEQAGGSKEDTTTLHVLGLLKELMGIFPLVAVKSCCETLLRVMTLSHVLVTASAMQAFHK
LFSGKPNALTLSPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLAGLQSTLSLG
HLPRLFSAATSCLLSPHTQVASAATNTLKTLLTECVAPHMEGMGMITATASAGNPSYVCK
MFRIIEDGLSYRFHAAWPFVLQSLGCFYRAAGKQAHPIMTKSLQSLADLRSTPHFPFSGE
LDLAVGGAVEVMGPEVVLGAVPLNITGYDDDLEFPRSWLIPVIRDHVKNTHLGFFSSYFL
PLASTLMQRAVELEQAGQKLESKVYKTLQTQIWTMLPGFCTCPVDLLASFKSIARTLGMA
VNERPDLRLTVCQALRTIVNKSCSTEEEKAEVGRFSKNFLPILFNVYSQKPAAGESATYR
MAVLDTIKVYLTVTETEMICTFLQKATDRLISSDANEFTRLSMMDLVVAMAPSLDEVTIT
KTFELIKPYLETKEPGMQKKAYRVLEEMCGGERDECRSFVVANLEALKVVLLETLKNASS
PAKRPRLKCLIHIVKSLNEEHRDFITTLLPEVIICTKEVSVGARKNAYNLLVEIGNAFIR
FCGNINDAMEQYLALVYAGLTGSVTMITCTVLALTRLMFEYKDAIDVTTREQLLHNVCLL
LTSRTREIVKASLGFIKVILFIMDPKTLASHATVIMKGVGSIKDDVRRHFRTKLKNIFTK
FIRKFGFELVKSMLPAEHHKVLANIRKADARTKRKKQAKEQQDDSNSEKDNPKAKSQSIE
DILAESDSDMSEDEGKKKYSQKKAGKPQKARAWLKEGEEDDPLNFLDPKVSQRVLATNPA
MKKSAKVAHGFKVTSDGRLIIREDDVEDVKDNDEGEMKDILEEAGVKSKKSLKRNFQNDN
FDDDMDVQPQQKYKAGGSGIHRALGGREDMGSDYKSKKGKGDVKIKGKVDPYAYIPLKKS
QLNRRKRAKMQGQFQGLVRGAQKGALSGKKMQKKKRKA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcggggaaacttcgatccgggacggggtctaaactaaaacggtggaagaaa
ggacacagtagcgactcaaacccggagacgagtcggcatcggcaggctgctaaaagccgc
ttcttcagccgacccaccggaaagagcgacctaacggttgatgctcttaagcttcacaat
gatctgcaggtcggtccgctggagctgggtggccgtaaaaatgcctgtatggaagaggag
cccaatgaggggttttcagaaaggacctcgggtaccttcctcagcggcctgtcggactgc
tcgaacctgaccttcagaaatgtgcagcgctactgggaatccaattcagctgctcacaaa
gagatctgtgcagtgttggcagctgttactgaggtgatccgtagtcgaggagggaaggag
acagaaacggagtactttgctgctttgatgacgacactggaggttgtggattcggccgag
tctcaggctgcagtggcgtaccttctcaacctcgtcatgaaacgggttcctgttcctgtg
ctcatgtcaaagttctcggacaccaccaaggctctgatggagatcatgtccaaacaggcc
atgtttgagacttcctcggctcttagatggatcctgtcgtgcttggccactttgttgagg
aagcaggatgcaactgtctggacttacccgtctactgttcaggcttaccacggccttctc
agcttcacagtgcacagcaagccaaagttaaatttcatgtcctgtttctcttctcaggtc
cgtaaagcagcgcagcaaggcgtctgctccattctcagaggtagtgacttcctgtttaca
gacgatgccccgacccatcaccctgctgcagccaccacagccaagttctgcatgaaggaa
atggagcaggcaggaggcagcaaagaggacaccaccacacttcacgtgctggggcttctg
aaggagttgatggggatatttcctctagttgctgtcaagtcctgttgtgagactctgctg
cgagtgatgaccctcagccatgtgctggtgaccgccagtgccatgcaggcctttcataag
ctattcagcgggaagccaaatgccttaaccctctctccagaactcaacgcacagatcatc
acggctctttatgactatctgccgagtgagaatgacctgcagcctctgctggcttggctc
gctgtcatggagaaagcacatgtccacttggcgggtttgcagagtactctgagtttgggt
cacctccctcggctcttctctgcggccacgtcctgtctgttgtcacctcatacgcaggtg
gcttctgcagccaccaatacactaaagacattattgactgaatgtgttgctcctcacatg
gaggggatgggcatgatcaccgccacagcctcggcagggaacccctcctatgtctgcaaa
atgtttcgcatcatagaggatggattgtcttaccgcttccatgccgcctggccatttgtg
ctgcagagcctgggttgcttctatcgagcggcagggaaacaagctcaccccatcatgacc
aagtccctgcagtctctggcggacctgcgctccactcctcatttccccttcagcggtgag
ttggacctggctgtaggaggcgctgtagaggtcatggggcctgaagtggtgctgggtgct
gttcctctcaacatcaccggctacgacgatgacttggagttcccacgcagctggctgatc
ccggtcatacgggaccacgtgaagaacactcaccttggtttcttctcttcctacttcctc
cctctcgcctccacactcatgcagagagctgtagaattggagcaagcaggccagaaactc
gagtccaaagtctacaagacattacagacgcagatttggaccatgcttcctggcttctgt
acatgtcctgtggacctacttgcatccttcaaaagcattgctcgcacactcggtatggct
gtgaatgaacggccggaccttcggctcacagtgtgccaggctctacgcacgatcgtcaac
aagagctgctccaccgaggaagaaaaagctgaagtgggccgcttctccaagaacttcctg
cccatccttttcaatgtgtacagccagaagcctgcagccggagagtccgccacctacagg
atggctgtgctagacaccatcaaggtctacctaactgtcaccgagacagagatgatctgc
actttcctccaaaaggccacagacagattgattagctctgacgccaacgagttcacacgg
ctgtcaatgatggaccttgtagttgccatggctccctctttagatgaggtcaccataact
aaaacctttgagctgattaagccatatttggagaccaaagagcccggcatgcagaagaag
gcgtaccgtgtgctggaggagatgtgtggaggagagagagatgagtgcagatcgtttgtc
gtagctaatctggaagcgctcaaagttgtgctgctcgaaactctgaaaaatgcctcctca
ccagcaaagaggccgagactgaagtgtctgatccacatcgtgaaaagtctcaatgaagaa
cacagagacttcataacaacactgctgccagaggtgattatctgcaccaaggaggtgtct
gttggagcgcgtaagaacgcctacaatctgctggtggaaataggaaacgcattcatccgc
ttctgtgggaacataaacgatgccatggagcagtacttggcattggtgtatgcaggactt
acaggctccgtcactatgatcacctgtacagtgttggcgctaactcgactgatgtttgag
tacaaagacgctatagatgtgaccaccagggagcagctgctgcacaatgtgtgtctgctg
ctgacatctcgtaccagagagatagtcaaagcttccttaggcttcatcaaagtcatcctc
ttcatcatggaccccaagacgctggcatcacatgccactgtcataatgaagggagtcggg
agcatcaaagacgatgtgaggaggcacttcagaaccaaactgaagaacatctttaccaag
ttcatcaggaagtttggttttgagctggtgaaaagcatgctgcccgcagagcaccacaag
gtccttgcgaacatccgcaaggccgatgctcgcaccaagagaaagaagcaggctaaagag
cagcaggacgactccaacagcgaaaaggataatcctaaagccaagagccaaagtattgag
gacatccttgccgagtcagacagtgatatgtcagaggacgaaggaaagaagaagtattct
cagaagaaagcaggcaaaccgcagaaagcaagggcctggctcaaagaaggagaggaagat
gacccacttaacttcctggaccccaaggtttcccagagagtgctagccaccaacccagcg
atgaaaaagagtgccaaggttgcgcacggcttcaaggtgacgtcagacggacggctgatc
atcagagaggatgacgtggaggatgtgaaagacaacgatgagggagagatgaaagatatc
ctagaagaggccggagtcaagagtaaaaagtcactgaaaaggaatttccaaaatgacaac
ttcgatgatgacatggacgttcaaccccagcaaaaatataaagctggcggctcgggtatc
cacagagccctgggaggaagagaagacatgggttcagactacaagtcaaagaaaggaaaa
ggagacgtgaagataaaaggaaaggtggatccttatgcttacatccctctgaaaaagtcc
cagctcaatcgaagaaagcgggccaaaatgcagggccagttccagggcttggtgagagga
gcccagaagggggcgctgtctggaaagaaaatgcagaagaaaaagaggaaagcctga
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