Pseudoliparis swirei (Mariana hadal snailfish): 130206827
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Entry
130206827 CDS
T09868
Symbol
atrnl1a
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130206827 (atrnl1a)
Lectins [BR:
pswi04091
]
C-Type lectins
Others
130206827 (atrnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_6
Kelch_5
Kelch_4
CUB
EGF_TEN
Kelch_2
PSI
EGF_Teneurin
NANM
EGF_2
TMEM100
ODV-E18
Motif
Other DBs
NCBI-GeneID:
130206827
NCBI-ProteinID:
XP_056290985
LinkDB
All DBs
Position
17:21548091..21787484
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AA seq
1406 aa
AA seq
DB search
MEAVGGGVPLCTWTAKRRSAAFMTYLGVLVMLHLVLHAEAASSSSSSSSSSKSCEKNCLS
GRCINGTCACDHGWVGDQCQHCQGRFKLTNLSGFLTDGPVNYKYKTKCTWLIEGFPNAVL
RLRFNHFATECSWDHMYVYDGDSIYAPLIAVFSGLVVPLARGNETVPEVVTTSGYALLHF
FSDAAYNLTGFSIAYSVNSCPNNCSGHGRCSTANSASGRVYCECDESWKGDACDVPYCRG
NCGSPGRGYCDLTGEKLCVCNDSWQGPDCSLSIPSTEAFWMLPSVKPSAQSLGRASHQAL
VHSGLMWVVGGHSFNYSNYHMVLNYNLESSTWDVVPVSSGPLYRYGHSLALFQDDIYMFG
GKLEAPSANVTDELWVFNVPRRAWSPRTPAPPPPYALEGHSAHAVELADGERVMLVFFGY
SPTYSYINKVQEYNFRSDSWQVVPAEGAVVQGGYGHSSVYDEAAGCVFLHGGHKALGGNK
YGLVDHMYRYHVHSRTWLILQESGVARYLHSAALLSGTVLVFGGNTHNDTSLSNGAKCFS
ADFLAYDIACDEWTVLPRPGLHREANRYGHSAVVSNGSMFIFGGFSGLLLNDVLTYTPPS
CRAFSNPALCAAAGPGLRCRWVKSGCVPWETKAPDVGVPAAFCPGRPDSTDERCFRFPEC
ASCTANTRGCQWCEDRKCMSASSNCTALTLELAQQHGGALSLSRPPTMLSEHQLSLWKHG
ARRRGHSVRDSTGCHRREEQECYRLANCRSCSLNVNCQWELQQQECQALPGQLCGEGWHH
VGEACLRINSSSESYDNAQHYCKNLGGNIASLLTDKQVTFVLEELQKYQLQDKTLSPWVG
LRKINVSYWGWEDASPFTNTSLRWAPGEPSDSGFCAFLERAQAASLKAGPCTAAAAGLIC
GKPAGGPQSASARPCRTPCSLRSGCSNCTSQAMECMWCSSTRRCVDSSAYVVSFPYGQCL
EWQTQDCAAQNCSGLRTCVECLERTECGWCGDPSNTGKGVCMEGSYRGPMRPAGPPERHR
DMVLDQGLCSSDRGFNWAFIQCPACQCNGHSRCVNGSVCERCGNLTAGAHCQSCVAGYYG
DPTNGGKCNACKCNTHADVCHVNTGKCFCTTKGIKGDQCQLCDSENRYLGNPLRGTCYYN
LLIDYQFTFSLLQEDDRHYTSINFMATPEQANKNLDMSINASNNFNLNITWSLSSTAGTI
SGEEMPIIARTDIKEHRDSFSCEKFNFRLHHNITFYVYVSNFSWPIKIQIAFSQHNSIMD
LVQFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREHLMRERQQMASRPFASVNVALEAG
GDQEELLQAVPKPIAMEPCWGSRAGVLTVLLYLPRVPSGIPPPGQSGIAIASALVDTSQQ
RLMDFKERGLGLKHRKHTVLHQGTCV
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtcggcgggggggtgcctctgtgcacctggacggccaaaaggaggagcgcc
gccttcatgacatacctgggagtactcgtgatgcttcacctcgtgcttcacgcggaagcc
gcctcttcctcctcctcatcttcctcctcctccaagtcgtgcgagaagaactgcctgtcg
ggacggtgcatcaacgggacctgcgcgtgcgaccacgggtgggtcggggaccagtgtcag
cactgccagggccggttcaagttgacgaacctgtccggctttctcacggacggaccagtg
aactacaagtacaagaccaaatgcacttggctcatagaaggatttcctaatgcagtactc
aggctgcgcttcaatcactttgccacagagtgcagctgggaccacatgtacgtctacgat
ggagactccatttacgcccctttgattgccgtcttcagtggtctggtcgtcccgttggcg
aggggcaatgagacggtcccggaggtcgtgacgacgtccggctacgctctgcttcacttc
ttcagcgacgcggcctacaacctgaccggcttcagcatcgcctactcggtcaactcctgc
cccaacaactgctcgggccacggccgctgcagcacggccaactctgcgtcgggtcgcgtt
tactgcgagtgcgacgagtcgtggaaaggagacgcctgcgacgtcccgtactgccgcggc
aactgtggcagcccgggacgcggctactgcgacctcacgggggagaagctctgcgtctgc
aacgacagctggcaaggtccagactgctccctgtccattccctccacggaggccttctgg
atgctgccaagcgtcaaaccgtcggctcagtctctgggccgggcatcccaccaggctctg
gtgcactccgggctgatgtgggtggtgggaggacactctttcaactactccaactaccac
atggtcctcaactacaacctggagagcagcacgtgggacgtggtgccggtcagcagcggc
ccgctctaccgatacggacactcgttggctctgttccaggacgacatctacatgttcggc
gggaagctggaggccccgtcggccaacgtgacggacgagctgtgggtgttcaacgtcccg
cggcgcgcctggtcgccgcggacgccggccccgccccctccctacgccctggagggccac
agcgcccacgcggtggagctggccgacggcgagcgggtgatgctcgtcttcttcggctac
tcgccgacctacagctacatcaacaaagtccaggagtacaacttcaggtccgactcgtgg
caggtggtgccggccgagggcgccgtggtccagggcggctacggccacagcagcgtgtac
gacgaggcggccggctgcgtgttcctccacgggggacacaaggcgctcggcggcaacaag
tacggcctggtggaccacatgtaccgctaccacgtgcactccagaacctggctgatcctc
caggagagcggcgtagcgcggtacctccactcggcggcgctgctgagcggcacggtgctc
gtgttcgggggaaacactcacaacgacacgtcgcttagcaacggggccaagtgcttctcc
gccgacttcctggcgtacgacatcgcttgcgacgagtggaccgtcctcccgaggccgggg
ctgcaccgggaagccaaccgatatggacactccgccgtggtcagcaacggctccatgttc
atctttggaggtttttccggcctcctcctgaacgacgtgctgacctacacccctccgtcc
tgccgggccttttccaacccggccctgtgcgccgccgccgggccgggcctccgctgccgg
tgggtgaaaagcgggtgtgtcccctgggagacgaaggcacccgatgtcggtgtccctgca
gcgttttgccccgggcgacccgacagcacagacgagcggtgtttccgcttcccggagtgc
gcgagctgcaccgccaacacgcgcggctgccagtggtgcgaggacaggaagtgcatgtcg
gcgtccagcaactgcaccgcgctgactctggagctggcgcagcagcatggcggcgctctg
tctctgtctcgtccgccgaccatgttgtctgaacatcagctgagcttgtggaagcacgga
gccaggaggaggggacattcggtgagagactcgaccggctgccatcgcagggaggagcag
gagtgttacagactggccaactgcaggagctgctccctcaacgtcaactgtcagtgggag
ctgcagcagcaggagtgtcaggcacttcctggccagctgtgtggggagggctggcaccat
gtcggggaggcctgcctgaggatcaactccagcagtgagagctacgacaacgcccagcac
tactgcaagaacctgggaggaaacattgcctctttgctcacagacaagcaagtcactttt
gttctggaggagctacagaaataccaactgcaagacaagacgttatcgccctgggtgggc
ttgaggaagatcaacgtgtcctactggggctgggaggacgcctcccccttcaccaacacc
agcctgcgctgggcgcccggcgagcccagcgactcgggcttctgcgccttcctggagcga
gcgcaggccgccagcctcaaggccggcccctgcaccgccgccgccgccggcctcatctgt
gggaaacccgccgggggtccccagagtgcgagcgcccggccctgcaggacgccgtgctcg
ctgcgctccggctgctccaactgcaccagccaggccatggagtgcatgtggtgcagcagc
acgcggcgctgcgtcgactcctcggcctacgtcgtctccttcccttacgggcagtgtctg
gagtggcagacccaggactgtgcagcccagaactgttcaggtctgaggacgtgcgtcgag
tgtttggagaggacggagtgcggctggtgcggcgaccccagtaacaccggcaagggcgtc
tgcatggaggggtcctaccgggggcccatgaggcccgccgggcccccggagcgacaccgg
gacatggtgctggatcagggtctctgctcgtccgaccgaggcttcaactgggccttcatc
caatgtcccgcgtgccagtgtaacggtcacagcaggtgtgtgaacggcagcgtgtgcgag
cgctgcgggaacctgacggcgggcgcgcactgccagagctgcgtggccggttactatggc
gaccccaccaacggagggaagtgcaacgcgtgcaagtgcaacacccatgccgacgtgtgc
cacgtcaacaccgggaagtgcttctgcaccaccaaagggatcaagggagaccagtgtcag
ctatgtgactcagagaaccgttaccttggtaaccctcttcggggaacatgctattacaac
ctgttgatcgattaccagtttaccttcagcctgcttcaggaagacgatcgccactacacc
agcatcaacttcatggctacacctgaacaggccaacaagaacctcgacatgtccatcaac
gcctccaacaacttcaacctcaacatcacctggtccttaagctcaacagccggcaccatc
tccggcgaggagatgccgatcatcgcgaggaccgacatcaaggagcaccgcgacagcttc
tcgtgcgagaagttcaacttccggctccaccacaacatcaccttctacgtctacgtgtcc
aacttcagctggccaatcaagatccagatcgctttctcccagcacaacagcatcatggac
ctggtgcagttcttcgtcaccttcttcagctgcttcctgtctctgttactggtcgctgct
gtggtctggaaagtcaaacagacgtgctgggcctcccgacgcagagagcacttgatgaga
gagcggcagcagatggccagtcgtccctttgcttcggtcaacgtggcgctggaggcgggc
ggcgaccaagaggagctgctacaggcggtgccgaagcccatcgccatggagccgtgttgg
gggagccgagcaggtgttctgacggtgctgctgtatctgcccagagtcccatctgggata
cctccacctggacagtctggtattgcgatagccagtgccctggtggacacgtcacaacag
cgactaatggacttcaaagaaagaggcctgggtttgaagcaccgcaaacacaccgtgctc
caccaagggacctgtgtatga
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integrated database retrieval system
