Pseudoliparis swirei (Mariana hadal snailfish): 130206907
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Entry
130206907 CDS
T09868
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130206907 (ttc21b)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
130206907 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21
ARM_TT21_5th
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_1
TPR_16
TPR_12
TPR_6
TPR_8
TPR_11
ANAPC3
TPR_7
CFAP70_TPR_C
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_9
RMD1-3
TPR_15
TPR_21
Wzy_C_2
TPR_Slam
TPR_Psidin_N
PknG_TPR
DUF6057
ANAPC8
Motif
Other DBs
NCBI-GeneID:
130206907
NCBI-ProteinID:
XP_056291146
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All DBs
Position
2:complement(10624723..10638974)
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AA seq
1317 aa
AA seq
DB search
MEDEETTLALIRCYCYEKYFNHAVNAAETARRKFNDDPIYTFLHAYGILMQDHIQEASVE
LDTLRDSRDVSLCTLMALVYAEKKKTNPDREVIQELDAKVKEDRKSASPKSLYYAGMFLW
LLGRNDKAREYTERMIKLSSGSREGMILKAWIDVTSGKDSFARKAGKYFDEGLKERADVF
ALMGKAQYYEYRQNYSGALEMVNKVIVSFPGFLPALTKKMKLFLSLQEWEQTINAAHRLL
QKDTNNLEALRMLALHSLCRDGDITESVKQLSNLISNLENLEPHNPKLYYRMSLAFTRVC
GRNEKLMEQTFRMVERAFSVASGDSDVATELGYQMVLLGRIKEAMKWYKTAMTLDETSVS
ALTGIIRCQLIEGHLEDAEQQLEFLTEIQQSIGKSGELLYLRAVLAVKKRRSQEEVTNLL
NDAVDTHFSTLHGLPLGVEYFEKLNPDFLLEIVKEYLAMCPTKPPAQGQPPAPQLQHCAT
LLDTVVKIVPGLPQGVFLLAKVRYQSGDIEAAQSNLKHCLDQCPSYADAHLLMAQIHLLQ
GNFSLSSQSLELCLSHNFEIREHPLYHLINAQAKKKMGELTEAIQTLQMAMSLPGVRRAG
SSSKSKSKKIELSPSDCLSVFLELAEALWLNGEQHEAAKVMQDAINEFSGTPEELRVTIA
NADLALLRGDTELALSMLRNITPEQPYYIQAKEKMADIYLNHRKEKRLYASCYREMVEKL
PSTHTYLLLGDAYINIQEPEKAIDVYEQALKKNPKDGALASKIGKALVKTHNYVKAINYY
EAALKMEQQKFLRYDLAELLMKMKQYQRCERVLHEALAHEPVIELPTLSDDCRYLVLLAK
VQNKVDKNEEALLSLQRARDVQAKVLKRVQLEQPDAVPVQKQLAAEICAEIAKHYTSQRG
YERAVKFYKEALVYCETDHKVMLELARLYLTLDEVDACLEQCGVILKNDQFNEDATLMMA
DIMFRKQDYEQAVFHFQQLLGRKPDNYLTLSRLIDLLRRAGKLEEVPRFIDMAKKHSSRT
KFDPGFHYCKGLHLWFTGEPNDALRHFNKARKDNDWGQNAVYNMIEIYLNPDNDTMGGEV
FENLDGEIGNSTEKQESEQVAVRTADMLLKELKPQTPGGKVQLRILENYCFLATKQKANV
EKALGVFTEIANNEKEHVPALLAMATAYMMLKQTPRARNHLKRIAKMNWSIVDADEFEKS
WLLLADIYIHLGKYDMAGDLLKRCLNHNKSCCKAYEYMGYITEKEQAFRDAALNYELAWK
YGNQTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLAAHPNYPRMRKDILDKARVALRS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaagagacaacgttggctttgatcagatgctattgctatgaaaagtatttc
aatcacgctgtgaacgctgcagaaactgcacggaggaagttcaacgatgatcccatctat
acttttctccatgcatatggtattcttatgcaagatcacattcaagaagcctccgtagag
ttggacacattgagagatagtcgagatgtgtctctctgcacattaatggcccttgtctat
gctgagaaaaaaaagacaaacccagacagagaagtcattcaagaacttgacgctaaggtc
aaagaggatcgaaaaagtgcatctcccaagagcctctactatgctgggatgtttctctgg
ctgttagggcgaaatgataaagcaagggagtacacagagagaatgataaaactctccagt
ggctcgagagaggggatgatcctaaaagcctggatagatgtgacatctggtaaagactcc
ttcgccagaaaggctggaaagtactttgacgagggactgaaggagagagcagatgtgttt
gccctgatgggaaaggcacaatattatgaatatcgtcagaactactctggtgcattggag
atggttaacaaggtcattgttagtttccctgggttcctgcctgccctcaccaagaagatg
aaactgttcctcagccttcaagaatgggagcaaaccataaacgcagcacacagactttta
cagaaggatacaaataatctggaggcactacgaatgctagctctacattctttatgtaga
gatggagatattactgagtcggtgaagcagctttcaaacctcatcagcaacttggagaat
ctggaaccacacaacccaaagctttactacaggatgtctctggccttcactcgtgtttgt
ggaaggaatgagaagctgatggagcagacgtttaggatggtggagagagccttctctgtg
gcatcaggggactctgatgtagccacagagttgggctaccagatggtgctcctgggcaga
atcaaggaggccatgaagtggtacaagacagccatgactttggatgaaacaagtgtttct
gctttgactggtataatccgttgccagctgatagagggccaccttgaagatgcagaacaa
cagttagaatttctcacagagattcaacaatcaattggaaaatccggggagctactctac
ctacgtgccgttctggcagtgaaaaagcgccgctcccaggaagaggtgaccaacctgctg
aatgatgcagtggacacacacttctccactctgcatggtctgcctctgggtgtggagtac
tttgagaagctgaaccctgacttcctcttggagattgtcaaagagtatcttgcaatgtgt
ccaactaagcctccagcccagggccagccgcctgctcctcagcttcagcactgtgccaca
ttgttggatactgtggtcaagattgtgcccggtcttccccaaggggtcttcctgctagcc
aaagtcagatatcagtctggtgacattgaagctgctcagagcaatctaaaacattgtctg
gaccagtgtccgtcctatgcagatgctcatctgctcatggcacagattcatctgctgcag
ggtaacttctcactgtcttcccagtctcttgagctctgcctcagccataactttgagatc
cgagaacatcccctgtaccacctgatcaatgctcaggctaagaagaaaatgggtgagctg
acggaggctattcagacactgcagatggccatgagtcttccgggtgtccgcagagctgga
tcctcgtccaaatccaagagcaagaagattgagctgagtccttctgactgcctctctgtc
ttcttggaattagctgaggccctgtggctgaacggagaacagcatgaagcagcaaaggtg
atgcaggatgccatcaatgagttctcgggtacccctgaggagctgcgtgtcactatcgcc
aatgcagacctggccctgctgcggggtgacaccgagctggcgctgagtatgctcagaaac
attaccccggagcagccctactacatccaagccaaggagaaaatggcggacatatatctg
aaccacagaaaagagaaacgcttgtatgccagctgttacagagaaatggtggagaagctg
cccagcactcacacatacctcttactcggtgatgcctacattaacattcaagaacctgag
aaagccattgatgtttatgagcaagctctgaagaaaaaccccaaagatggtgctttagcc
agtaagattggaaaagccctggtcaagactcataactacgtgaaggcaataaattactat
gaagcagccctgaagatggagcagcagaagttcctgcgctacgacctggctgagctgctg
atgaagatgaagcaatatcagcgctgtgagagagtcctgcatgaagccctggcccatgag
ccagtgattgagctgcccaccctctcagatgattgccgttatctggtcctgttggcaaag
gtccaaaataaggtcgacaaaaatgaggaggctttactttccctacaaagagcccgggat
gtgcaggccaaggtgctgaagcgggtgcagttggagcagcctgacgccgtccccgtgcag
aaacagcttgctgccgagatctgcgctgagatcgctaaacactacacaagtcagaggggc
tatgagagagcagtcaaattctacaaagaggctcttgtgtattgtgagactgatcacaag
gtgatgctggagttggcacggctgtaccttactctcgatgaggttgacgcatgcctggag
cagtgcggcgtcattttgaagaatgaccagtttaacgaagatgcaactctgatgatggcc
gacattatgttcaggaagcaggactatgagcaggcagttttccactttcaacaacttctg
gggcgcaaaccagacaactacctgacattgtctcgtctcattgacttgttgagaagggcc
ggcaagttggaagaagttcccagatttattgatatggcaaaaaaacattcttccaggacg
aaatttgaccctgggttccactattgcaaaggacttcatctttggttcacaggagaaccg
aatgatgctctgcggcacttcaacaaagcacggaaagacaatgattggggtcaaaacgct
gtgtataacatgattgaaatctacctcaaccctgacaatgacaccatgggaggagaagta
tttgagaatttagatggtgaaatagggaactccacggagaagcaggagtccgagcaggtt
gctgtgagaacagcggatatgctgctgaaggagttaaagcctcagacaccaggaggaaaa
gtacagctccgcatcctggagaactattgctttctggccaccaaacagaaggccaatgta
gagaaagccctcggtgttttcacagagattgccaacaatgaaaaagaacacgtaccggca
ctgctggccatggcgaccgcttacatgatgctgaaacagactccccgagccaggaaccac
ctcaaacgcatagcgaagatgaactggagcattgtggacgccgatgagtttgagaagagc
tggctgctcttggcagacatctacatccatttgggaaagtatgacatggccggggacctc
ttgaagagatgtctcaatcataacaagtcatgctgtaaggcttatgaatatatgggctac
ataacggaaaaagagcaggcgttccgtgatgcagctctcaactatgaactggcttggaaa
tatggaaatcaaactaacccaactattggatacaagctggctttcaactacttaaaagca
aagaggcatgttgatgccatagatgtgtgtcataaggttttggctgctcatccaaattat
cctcgaatgagaaaggacatcttggacaaagcgcgtgttgccctgagatcttag
DBGET
integrated database retrieval system
