Pseudoliparis swirei (Mariana hadal snailfish): 130206910
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Entry
130206910 CDS
T09868
Symbol
psme4a
Name
(RefSeq) proteasome activator complex subunit 4A isoform X1
KO
K06699
proteasome activator subunit 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130206910 (psme4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pswi03051
]
130206910 (psme4a)
Proteasome [BR:
pswi03051
]
Eukaryotic proteasome
Regulatory particles
PA200
130206910 (psme4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
HEAT_2
Filament
CLASP_N
Motif
Other DBs
NCBI-GeneID:
130206910
NCBI-ProteinID:
XP_056291145
LinkDB
All DBs
Position
17:complement(10362414..10392467)
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AA seq
1847 aa
AA seq
DB search
MNEAQSDTLGFVPQKDIVYNKLLPYAERLDEESNDILSQIKSNLCRAVQLREIWPGVLFW
TRKLSTYMRLYGRKFSKEDHVLFIKLLYELVMIPKLEISMMQGLARLLINLLKKRELLSR
EDLELRWRPLYELHDRILFSKTEHLGLNWFPNSPRPRSSSKLIMIKLVQRCSVESVLKTL
VKCCRPYFAESATREMLDEWRPLLCPFDVTMQRAISNFELFLPTTLPPELHDKGFKLWFD
EFITLWLSVQNLPSWELHLVNLFARLTNDNIGYIDWDPHISKIFTRFLRSLNLPVGTSQM
MVARYVTNAYDISHMVLWVSSLLGGPSKQAQAQLSGLFNSITSFFHPSNHGRWLMKLMKL
LQRLPASVVRRLHRERYRKPTWLTPIPESHKLTEEDITCFVESMMQPVLLAMFSKTGSLA
AAQALQNLALMRPELVIPPVLEKTYPALETLTEPHQLTATLSCMIGVARSLVSGAQRFPE
GPTHMLPLLMRALPGVDPNDFSKCMITFQFIATFVTLVPLVDCSSALHERTDLTEVEREM
CSASAEFEDFVLLFMDRCFALIDSSTLEQTREETETEKMTHLESLVELGLSSTFSTILTQ
CSLDIFKVALGKVFNFATTNIFETRVAGRMVADMCRAASKCHPVESLKAFVPHCCNIINQ
IAVNEEVLNEEELDKEFLWNLQLLSEVTRVDGDKVLPYRSDLVQILQLTLHLKCKQGYIL
ACNLLHHILRSSALTYPTEYCSMPGGFHQPISDYLPIKDWGRPGDLWNLDIRWHVPSVEE
NSFVFYILDLILQPELQRLQRFAQGEQDMGRDDVLQSLTIIQHCLLGAGSLMPPLKGEPI
PELVHSMVNLDETILCIGTNYDESRENYRDAVCRVMRQLLHYILEHSEDDTKSLFSIIKI
ISDLMHFRGSHKHEFDTRWKSFNLVKKSMENRLHGRKQHIRALLIDRVMLQHELRRLTVE
GCQYRSIHQELMKDLLRLSTSTYSQVRSRAQGVLYTALGTYNFCCRDLIPHVLEFLNPEN
GAVTQQQFKGALYCLLGNHSGVCLANLHDWDCIAVTWPAIVRSGLSSAMSLEKPSIVRLF
DDLADKIHRQYETIGVDFSIPAECCAVAKQLMITGNPVPGEPVPSEEEAAEGLKRQELKN
IESVEKYKRLIGDLLDFLNNRNMPWKFEHIAIGFMSLLLRDDHQLPPPAVLFFVKSLNHD
SLYVRKVAISAVAGIMKQIKRPHKKVPVSPSELCGGKELSGIVAGDRQDNKWLQYNGSSL
PRTQQEWDACVFVEKTHWGYYCWPRKLMMYAPMEEQPKQNLTREEMTEREQIIFDHFSDP
VFINQFIEFLSLEDRKGKDKFSPRRFCLFKGLFRNFSDVFLPLLRPHMERLVADSHESKQ
RCVAEIMSGLIRGCKHWSYFKVESLWELLCPLLRTALSNITIETYADWGTCIATACESRD
PRKLHWLFEMLMESPVNGEGGSFVDACRLYVLQGGLAQQEWRIPELLHRLLQYLEPKLTQ
VYKNVRERIGSVLTYIFMIDVNLPYTQPTTSPRIADFTERILLQLKPLIEGDEEIQNHVV
EENDVGEQDERTQAIKLLKTVLKWLIASAGRSFSTAVPEQLRLLPLLFKIAPVENDDSYD
ELKRDAKTCLSLMSQGLLYADQIPMVLSALQEISGSSSWHARYTVLTYLQIMVFYNLFTY
MSDQKAVDGIRALVVRLLEDEQLEVREMAATTLSGFLQCNFLSMDTPMQTHFEALCKTRL
PKKRTRELGSTVDTIPSADLVRRHAGVLGLSACILSSPYDVPTWMPQLLMDLSAHLNDTQ
PIEMTVKKTLSNFRRTHHDNWQQHKQHFTDDQLLVLTDLLVSPCYYA
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcgcagtctgacacgctggggtttgttcctcaaaaagacatcgtatacaac
aaactcctgccgtacgcggagaggctggatgaagaatctaatgacattctgagtcaaata
aagagcaacctgtgccgagctgttcagctgcgagagatatggcccggtgtgcttttctgg
acgaggaaactttccacatacatgagactgtatgggagaaagttcagcaaagaagaccat
gtgctgttcatcaagttgctctatgagctagtgatgatccccaaactggagatcagcatg
atgcagggccttgcgcggcttcttatcaacctcctcaagaaaagggaactactgtcgagg
gaggaccttgaattgaggtggagacccctgtatgagctccatgacaggattcttttctcc
aagacggagcatctgggcctcaactggtttcccaattctccgcggcctcgttcatcctct
aaactcataatgataaaattggttcagaggtgctctgtagaaagtgtgctgaaaacactc
gtgaaatgctgcagaccatactttgcagagtctgctactcgggagatgctggatgaatgg
agaccactcctctgtccctttgatgtcaccatgcaaagagcaatcagcaactttgagctc
tttctacccacgactctgcctcctgagctgcacgacaaggggttcaagttgtggtttgat
gagtttatcaccttgtggttgtctgtgcaaaatcttccaagctgggaattgcatctggtt
aacctctttgctcgcttgaccaatgacaacattggctacattgattgggaccctcacatc
tctaagattttcaccagatttttgaggagtttgaatctccctgtggggaccagtcagatg
atggttgcacgatatgtcactaatgcctatgacattagtcacatggtgctttgggtctca
tctcttctgggcggacccagcaaacaagctcaagcacagctcagtggacttttcaacagt
ataacatccttcttccacccatcaaaccatggccgctggttgatgaagctcatgaagctg
ctccaacgtctcccagccagcgtggtgcggcggctgcaccgagagcgctacagaaagccc
acgtggctgacgccaattccagaaagtcacaagctcacagaggaggatatcacatgcttt
gtggagagcatgatgcagccggtgctgctggccatgttcagcaagacgggcagcctcgcc
gcagcccaggccctgcagaacctcgctctcatgaggccggagttggtcattccccccgtg
ctggagaaaacatacccggcactggagactttaacagagccccaccagctgacagccact
ctgagctgcatgattggtgtggcccggagcctcgtgtcaggtgcgcagcgctttcctgag
gggcccactcacatgctgcccctcctcatgagggctttgccgggagttgacccaaatgac
ttcagcaaatgcatgatcacgttccaatttattgctacgtttgtgactcttgtgcctttg
gtggattgttcgtctgccctgcatgaaagaactgacttgacggaggtggaaagagagatg
tgctcagcttcagctgagtttgaagactttgtgcttctgttcatggacagatgcttcgcc
ctgatcgacagcagcacactggaacaaactcgggaggaaacggaaactgagaaaatgact
catttggagagtctggtcgagctcggcctgtcgtccacctttagcaccatcctcacacag
tgctccttggacatctttaaggtggctctgggaaaggtgtttaactttgcaaccaccaac
atctttgagacgcgtgtcgctgggagaatggtggctgacatgtgcagagctgcttccaag
tgtcaccctgtggagtcgctcaaagcgtttgtgccgcactgttgcaatatcataaaccaa
atcgctgtcaatgaggaagtgttgaatgaggaggagcttgacaaggagttcttgtggaat
ctccagctactgtctgaggtgacccgggtggatggggacaaggtcctaccttatcgttct
gacctggttcagattttgcagctgaccctccacctcaaatgtaagcagggctacattcta
gcttgcaacctgctgcaccacattcttcgctcctcggccctcacctaccccacagagtac
tgcagcatgccgggaggcttccaccaaccaatcagtgactacttacccatcaaggactgg
ggtcgtccaggggacctgtggaatttggatatccgatggcatgtgcccagtgtggaggag
aactcctttgttttttatatactggacctgatactccagcctgaacttcagcgccttcag
agatttgcacagggagagcaggacatgggcagagacgacgtcctacagagcctgaccatt
attcaacactgcctcctaggagctgggagtctgatgcccccactgaaaggagagcccatt
cctgaactggtccacagtatggtgaacctagatgagaccattctttgcatcggaacaaat
tatgacgagtctagagagaactacagagatgctgtctgtagagtgatgagacagctgctg
cattacatccttgagcattctgaagatgacaccaagtctcttttctccatcatcaagatt
atcagcgacctgatgcacttcagaggttctcacaaacatgagtttgacacccgctggaag
agcttcaaccttgtgaagaaatcaatggaaaacagacttcatggcagaaagcagcacatc
agagctctgctaatagaccgagtcatgctccagcatgaactgcgaaggctgacagtggaa
ggatgccagtacaggagcattcaccaggagctcatgaaagatctgctgaggctttccaca
agcacctacagtcaagtccgcagcagagctcaaggcgtgttgtacactgcactgggaacc
tacaatttctgctgcagagatctgatcccccatgtccttgagtttctcaacccggaaaac
ggcgctgtcacacagcagcagttcaaaggtgccttgtactgtctcctggggaatcacagt
ggagtgtgcctggccaatttacacgactgggactgcatcgctgtcacatggcccgccatt
gtacgctctggcctcagctcagccatgtctctagagaagccctccattgtgcggctcttc
gatgacctggcagacaaaattcatcgccagtatgagaccatcggtgtcgacttctctatc
cctgctgagtgctgtgcggtggccaaacaacttatgattactggaaatcctgttcccggg
gagcctgttccttcagaggaagaagcagcagaggggttgaagaggcaggagctcaagaac
attgagtctgttgagaaatacaaacggctcatcggtgatctgctggacttcctcaataac
aggaacatgccttggaagttcgaacacattgcaatcggcttcatgtcattgctgctgagg
gatgaccaccagctcccaccacctgctgtgctgttctttgtcaaaagcctcaaccacgac
tctctctatgtccgcaaggtggcgatatcagctgtggcagggataatgaaacaaataaag
agaccgcataagaaagtccccgtcagcccctctgagctttgtggtgggaaggagctgagt
ggcatcgttgcaggggaccggcaggacaacaagtggctccagtataacggcagcagcctg
ccacgcacacagcaggaatgggacgcctgtgtgtttgtggaaaagacccactggggatac
tactgttggccaagaaaactgatgatgtacgcaccaatggaggagcaacccaaacagaac
ctgaccagagaggaaatgacagagcgggaacagatcatctttgaccacttctcagacccg
gtattcattaaccagttcatcgagttcctctctctcgaggaccgtaagggaaaggacaag
ttcagccctcgcaggttctgcttgttcaagggattgttccgcaatttcagcgacgtcttc
cttcccctgctgcggccacacatggagcgcctcgtggccgactcccatgagagcaagcag
cgctgtgtggccgagatcatgtctggactgatccgaggctgcaagcactggagctacttc
aaggttgagagtctgtgggagttgttgtgtccactgctccgcactgccctgtccaacatc
accatagaaacgtatgcagactggggcacctgcatcgccacagcctgcgagagtagagat
ccacgcaagctccactggctgtttgagatgctgatggagtctcctgtcaacggagagggc
ggctccttcgtcgatgcctgtcgtctctatgtgctgcagggaggtctagctcagcaggag
tggcgcatcccagagctcctccacaggctgctgcaatacctggagcccaaactcacgcag
gtgtacaagaatgtacgggaacgcattggcagtgtgctcacgtacatcttcatgatcgac
gtcaacttgccatacactcagccaactacctccccccgcatcgcagacttcactgagcgg
attctgttgcagctgaagcctctcatcgagggcgatgaggagatccagaaccacgtggtt
gaggagaatgacgtgggagagcaggatgaaaggacacaagccatcaagcttctcaaaacc
gtgcttaagtggctcattgcgagtgctggtcgctccttctccactgctgtcccagaacaa
ctgcggctgcttccgctgctcttcaagatcgctccggttgagaatgacgacagttacgat
gaacttaagagggacgcaaagacctgcctgtctctgatgtctcagggactcctctacgca
gaccagatccccatggtcctcagtgctctgcaggagatttctggcagcagctcctggcac
gctcgctacacggtgctcacgtacctccagataatggtgttttataacctgttcacctac
atgagtgaccagaaagcagtggacggcatccgggctctggtggtgcgactgcttgaggac
gaacagctggaggtcagagaaatggctgcaacgacactcagtggcttcctgcagtgcaac
ttcctgtccatggacacccccatgcagacacattttgaggctctctgcaagacccgcttg
cctaagaagaggacgagggagctcggctcgacagtggacactataccatccgctgacctg
gtgcggcgccatgcgggtgttctcggcttgagtgcgtgtattctctccagcccgtatgat
gtgcccacctggatgcctcagctgttgatggacctgagcgctcacctgaatgacacgcaa
cccatcgaaatgactgtgaagaaaactctatcaaactttcgacggactcaccatgacaac
tggcagcaacataagcagcattttacagatgaccaactgctggtcctgactgacctcctg
gtctccccctgctactatgcctaa
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integrated database retrieval system
