Pseudoliparis swirei (Mariana hadal snailfish): 130206920
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Entry
130206920 CDS
T09868
Name
(RefSeq) ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206920
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130206920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
FERM_f0
Lpg0393_VPS9
RA_3
Cwf_Cwc_15
TUG-UBL1
IQ_SCN5A_C
SH2_1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
130206920
NCBI-ProteinID:
XP_056291169
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All DBs
Position
17:complement(2617501..2649720)
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AA seq
1069 aa
AA seq
DB search
MSQPRKLEGKGSFFKLIDSFAWEIGTLKKEMGKKKEPEEDHKSDPLLGLGEEVGGLFLQA
SPCAGMRAGPAGVRDSGYDSLRRRLSILDRLVQTHAVWLQLGLGHQDAVRLLHSQPTGTF
VVRKSTSLQRKVISVRMNQDSAVPVKDFPVKESQYTFSLLGSGLSFADLFRLVAFCCISR
DVLPFTLKLPEAIASATTSADLEEVAKLGAGFWDSPTCRRRKGSGLASPERPPLPVSSAA
IPGHPGLRTRTPSELERCQSNGALCFINPLFIKVHQPDGDRATASNPSAREEPVSGGLET
DNEDARGDRVSDRRDGGPSGQSDLQRPDGNLEPRDDSGGTGGGPKISAADSAPRSPPPRP
PPPRVASQLLRKRRMPEKIPWVNGPKEKERERCSSLLFRLSSSLSISPSSSPPKRLSSPI
SIPRPSLPSFSSSSGRRATASPSSSQEDAQCHLALEEQTIESALVRAVLCRRNAARTLAQ
GSVSPPGGTPVATGGRAEATGRDEEEEAGEERSARGQRLSDMSLSTDSSDSLDFSQSSAF
FLPPLHDPKPPTADDFNAHLPLSLPPSRSTEDDEDDEDDEDDDEDDEDPDYGLESDQDQD
LTMVPPGLRARRRPSAGALILQRALRRHLRKMSGVFNSLLTPEKRAIRRVVELSRDKGSY
FGCLVRDYLGYMGEGAGTQALQGYASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIP
EDQIDRVLEKAMHKCVLKPLKPVVSAALQEFQVRSGEWRELRENLALAKARQPQEMGVAD
TPPPDPVAIEKIKQKFHTMSKLYSPEKKVTMLLRVCKLIYTIMEDNSGRLYGADDFLPML
TYVLAQCDMPQLDNEILYMMELLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSS
ETRDTLHQWHRRRTAQRSAPSIEDFQNYLRVALQELDSGCTAKTLQVRPHATVEEVCRVC
ADKFKVPDPENYGLFLLTEGSGQQLAPDTHPQKIKAELHSRSQATPFHFVFRRVAGGGVG
ASSSPSDLAPNLNDLAATSGPRVDPNDLGAEPSGLGLPPGRLHGNSISI
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaccccgcaagctggaggggaaaggcagtttcttcaagttgatcgactcgttt
gcctgggagatcggcacgctgaagaaggaaatggggaaaaagaaagagcccgaggaagac
cacaagtcggatccactccttggactgggcgaagaggtgggcggtctcttcctgcaggcc
tctccctgtgccgggatgcgagccgggccggccggcgtgagagactcgggctacgactcg
ctccgccggcgcctcagcattctggaccggctggtgcagacgcacgccgtgtggctgcag
ctgggcctcggccaccaggacgccgtgcggctgctgcacagccagccgaccgggacattt
gtggtgaggaagtcgaccagcctgcagaggaaagtcatctctgtgcgcatgaaccaagac
tctgcggtgcccgtcaaagacttccctgtgaaggagagccagtacactttctctctgctg
ggctccggcctgagctttgctgaccttttccgtctggtggctttttgctgcatcagcagg
gacgttctgcccttcactctgaagcttccagaagccatcgcctcggccacgacgtccgcc
gacctggaggaggtcgccaaactcggagcaggcttctgggattctccgacgtgtcgcagg
agaaaaggctccgggctcgcttctccggagagaccgcctctccccgtctcctcggccgct
atcccggggcaccccgggcttcggactcgcaccccatcggagctcgagcgctgccagtcc
aacggagcgctttgcttcatcaaccccctcttcataaaggtgcaccaaccggatggcgac
cgcgccaccgcctcgaatccctcggcgagggaggaacccgtgagcggcggcctggagacc
gacaacgaggacgctcgcggagaccgggtctcggatcgaagggacggcggcccgtcgggt
caaagcgaccttcagaggccggacggaaacctggagccgcgggacgatagcggcggaacc
ggcggcggtccgaagataagcgccgcagatagcgcgccgcggtcgccgccgccgcgtccg
ccgccgcctcgtgtcgcgtcgcagctcctccgaaagcgccgcatgccggagaagatcccc
tgggtcaacggccccaaggagaaggagagggagaggtgcagcagcctcctcttccggctg
agctcctcgctgagcatcagcccgtcgtcctcccctcccaagagactcagctcccccata
tccatcccccggccctctctgccatccttctcctcctcctctggacgtcgggccacggcc
tccccgtcgtccagccaggaggacgcccagtgccacctggcgctggaggaacagactatt
gagagtgctctggtcagggcggtgctgtgtcggcggaatgccgccagaaccctcgcccag
gggtccgtcagtcctccgggcggcacgccggtggcgacgggcgggcgggccgaagcgacc
ggaagagacgaagaagaggaagcgggcgaggaacgcagcgctcgcggccagcggctgagc
gacatgagcctctccaccgattcctcggactctctggatttctcccagtcgtcggccttc
ttccttccgccgctgcacgaccccaaaccgcccacggcggacgacttcaacgcccacctt
cccctctccctgccgccgtcccgcagcacggaggacgacgaagacgacgaggacgacgaa
gacgacgacgaggacgacgaggatcccgactacggcctcgagagcgaccaggaccaggac
ctcaccatggtgccgccggggctccgcgcgaggcggcgcccgagcgccggcgccctgatc
ttgcagagggccctgcgaaggcacctgcgcaagatgagcggcgtgttcaactcgctgctg
acgccggagaagagggcgatccggagggtggtggagctgtccagggacaaaggctcgtac
ttcggctgcctggtgcgggactacctgggctacatgggcgagggcgccggcacccaggcc
ctgcagggctacgcctctggactggagctgctgcagaccctccgccagttcatcacccag
atgaagagctacctgaggcagagctccgagctggagccgccaatcgagagcctcattccc
gaagaccagatcgaccgagtcctggagaaggccatgcacaagtgcgtcctgaagcctctc
aaaccggtggtgagcgccgccctgcaggagttccaggtgcgcagcggcgagtggagggag
ctccgggagaacctggcgctggccaaggcccggcagccgcaggagatgggcgtggccgac
acgccgccccccgaccccgtggccatcgagaagatcaagcaaaagttccacaccatgagc
aagctgtactcgcccgagaagaaggtcaccatgctgctgagggtctgcaagctcatctac
accatcatggaggacaactcgggtcgcctgtatggtgccgatgacttcctgccgatgctg
acctacgtgttggctcagtgcgacatgccccagctggacaacgagatcctctacatgatg
gagctgctggacccctctctgctccacggagaaggtggctactacctgaccagcgcatac
ggagccatgtctctgatccgtaacttccaggaggagcaggcggccagagtgctgagttca
gagaccagggacacgctgcaccagtggcaccggcgccgcaccgcgcagcgctcggcgccg
tccatcgaagacttccagaactacctgcgggtggcgctgcaggagctggacagcggctgc
acggccaagaccctccaggtgcgcccgcacgccaccgtggaggaggtgtgtcgcgtgtgc
gccgacaagttcaaagtgccggacccggagaactacggcctgttcctcctgacggagggc
agcggccagcagctggcgccggacacccaccctcagaagatcaaggcggagctccacagc
cgctcgcaggccacgcccttccacttcgtcttccgccgcgtggccggcggcggcgtcggc
gcctcgtcgtcgccctcggacctcgcgcccaacctcaacgacctcgccgccacctccggt
ccccgcgtcgacccgaatgacctcggtgcggagccgtcgggcctcggcctgccgcccggt
cgtctccatggcaactccatctccatctga
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