Pseudoliparis swirei (Mariana hadal snailfish): 130206927
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Entry
130206927 CDS
T09868
Symbol
piezo1
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130206927 (piezo1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130206927 (piezo1)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130206927 (piezo1)
Ion channels [BR:
pswi04040
]
Other channels
Mechanosensitive channel (Piezo)
130206927 (piezo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
130206927
NCBI-ProteinID:
XP_056291185
LinkDB
All DBs
Position
17:complement(5160886..5244177)
Genome browser
AA seq
2608 aa
AA seq
DB search
MDLQVIVWVLYCFLMPTALLTASLFRYNILSLVHFLYLLLLPWFLSPNKHTIRGHTGQFI
RVVFCTSLLFVLAHICFQTVLYTYPPLNIAIGDNCSQWDTISRIIGLSRLPLDDPWSVLR
LLCPDMGVCVVTLTTIVLCSRLVRNREMVAAANITSLEDGSTEKNIDDDEEEEEEEKEEE
VDEPSGDEERSGDEDEEERPLPGDPDEEVSTATRAKQLAERLKSKARKLLRDLGKILAIG
LLALAGITLPSAFSAVYFLLFIGVCTWWACHLPISHLGFNALCVMVGFFTAGHMVCLYVY
QSLLAQALFPPHSLWARLFGLKAIIITGNCSSPYDLNLNADHDWPVYVNPGILFLLYITI
TTVIKTGYHGTPNQQVEEKIEEEEIVRLRSWNQQTHDYEDDTQLMLLSMGSESSRGGTMA
GEKEPDPGAQGAPSGSQQSESPFFMLGKVVMQQSYVCALIAMMVWSITYHSWLTFVLLLW
ACLIWMLRARRHAATLCSPFILLYGLALCCLQYVWAMELQPELPTTVGTMSLRQLGLDRA
QHPCLRLGAMLLFTLTFWLLVRQSVKENFTRKKKMTTPLQEVTTGEGAGEESVLKVLGGM
LMSSHAKYWIYVCGGMFIMVSFAGKLVGYKIIYMLLFLLCLCLYQVYYSLWRRLLKLFWW
LVVAYTMLVLICIYTYQFEDFPGYWRNCTGFTEEQLAAIGLETFALSELFSSILIPGFFL
LACILQLHYFHKPFMRITDLEHVTPIDKKKHSERTERIGSGHVGMNFEEEDLLTNIDEEP
EDEGEKTTVELMSSKWGLVMDRLLVLSRRFSDTLTQIQMFLWRLLELHILKMVAFFSMWV
SLEEPSVMNLVLVVLWSLAMPYSRFGPMASCLSTVWVCVIIVCKMLYQLSVVNPVEYSSN
CSLPLTNETNLLPEEMMNSSLYQEPVDPAKWFGIRKDATVLGYSKNHLIVLMLLVFEATV
NRHQTHHYRQLQRSPPAIPALFPAATRDTLDQGLIPCLKYLLNYTFYKFGLEICFLMTVN
VIGQRMNFLVIIHGCWLVAILVRRRRAAIARIWPKYCLFLSIFMIYQYLLCVGMPPALCI
DYPWRWNTPVLINSALVKWIFLPDFYTVPNSKNLIADFVLLMCASQQWKVFECEHTEEWM
VLAGENTDDPEPMKGRLFNPAPNFINCRSYLDMAKVLVFRHLFWFVLSVVFITGATRISV
FGLGYLLACFFFLLFGTKLLVKSSRTRLALWDCLIIYNVAVIVSKNMLSILACVFVFEMQ
KGFCWVIQLFSLVCTVKGYYDPNAVSDKTCSLPVEEAGVIWDSICFLFLLLQRRVFLSYY
FLHVIAELQASAKQASRGFGLFRASIVKNIKFHQQAERKSLSQLKRSMQRIRAKQQKHRD
GHKTSEDSNESQNAETPTKKKSSRKKNWSQPWLDHATVLHSGEYYLFESDSEDEEDSEEQ
KPQKQTACQLAYLAWVTSVKTALKERQRHQHHLRRIERKEKEREARVDSQPEAFSALGCG
ENDVFEDPGLQAEEPEEKESSHGKMVQRILNILHLLLAIVLAIVDGLTQWLNLLTKQYRE
TSTVLCNERYFILHKIQQHHTTADSTDDQVSQGSESPTLDTCLDETDADSTGHSCLKGDS
RGATDRSTPKPRLNSIGNLLSPEESPSSSMALVPAPSKQQHRHSRTASELLGERQFFIEE
LEQSREFYNNQSRLLKLLFAMYNLLAANSELVCYFIIVLNNAVSASVISLALPILVFLWA
MLAVPRPTKKFWMTAIVYTEVMVVVKYLFQFGFFPWNSVHEMTLNEDKPFFPPRILGLEK
IDNYIRYDLLQLLALFFHRSLLMRYGLWDHEGPLEEQSPSPESCKDEGKNIEGDEDGRKK
EGRGEEEENRVSSTSTLDNLEISELDQLEKDMVDDAEPSTSSAEPAASGSNDGHETPSGL
KDSSDPPGRPREDKTVGDDEQEAKEVPKKSSSLRFRMKPKKDKQRHSKVEPTVETAEPCA
AEPVKKEQKGSRREAASRRLLAVGDKIKQVLLSGIQSVYRPTQGFFRGILHAEYRTATDV
YAFMFLTDVVDFIIIIFGFWAFGKHSAAADIASTLSEDQVPEAFLVMLLLQFSTMIIDRA
LYLRKAVFGKLIFQVILVFGIHLWMFFILPAVTERKFNQNFVAQLWYFVKCIYFGLSAYQ
IRCGYPTRILGNILTKKYNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWICVE
DIYANIFIIKCSRETEKRYPQPKGQKKKKIVKYGMGGLIIFFLICIIWFPLLFISLVRSV
VGVVNHPIDVTVTVKLGGYESLFTMSVQQQSIQPFTQVEYDQLTHHFGDNAVAMQFITLY
GYEDIVTAMVEGSSGSVWRISPPSRQEVIKELLGSPVHLTLRLAWTFQRDLGKGGTVEHT
FDKHSIDLEPGNPVRADLASLLVGNRSEPVHVPHMIPNYIRAPNGAEAKPVNQLYKGEDG
YLNITLSLKSDRSLNGSGNQEWWDIAIAGCASSSCGVLPIVIFNDKVSPPSLGFLAGYGI
MGLYVSVVLVIGKFVRGFSSEISHSIMFEELPCVDRVLKLCTDIFLVRETGELELEEELY
SKLIFLYRSPETMIKWTRNMHSREHNRY
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atggatctacaggtgatcgtctgggtgctgtactgctttttgatgcccaccgcgctgtta
acagcttctctttttcgctacaacatcctgtcactggttcacttcctctacctgctgcta
ctgccctggttcctgagtcccaacaagcacacaatcagaggtcacacaggacagtttatc
agagtggttttctgcaccagtctactatttgtactggctcatatctgcttccagacagta
ctatacacatatcctcctctcaacattgccataggtgataactgttcacaatgggacacc
ataagcagaattataggactgtccaggctacccttggatgatccatggagtgtgttacgc
cttctctgtcctgacatgggcgtgtgtgtggtcaccttgacaacaatcgtcctctgcagc
agattggtcaggaacagagaaatggtggctgccgccaacattacatcgcttgaagatggt
tcaacagaaaaaaacatagatgatgatgaggaggaggaggaggaggagaaggaggaggag
gtggatgaaccatcaggagatgaagaacgatcaggagatgaagatgaagaagaaaggccc
ctccctggcgaccctgatgaggaggtttccacagcaaccagagccaagcagctggctgag
cgtctgaagagcaaagctcggaaacttcttcgggacttggggaaaatcttggccatcggc
ttgctggctttggctggcatcacgctgccctcggccttctcagccgtctacttcctgctt
ttcatcggcgtgtgcacgtggtgggcgtgccaccttcccatcagtcacctgggtttcaat
gcactgtgtgtgatggtgggcttcttcactgctggtcacatggtttgtctgtacgtgtac
cagagtctgctggcccaggccctgttccctccacacagtctgtgggccagactctttggt
ctgaaggccatcatcataacaggaaactgctcctcaccctatgacctgaacctgaatgcg
gatcatgattggccagtttacgtcaacccgggaatactgtttctcctctacattaccata
acaacagttatcaagacagggtatcatggaacacctaaccagcaggtcgaggagaaaata
gaagaggaggagattgtaaggttacggtcatggaaccaacagacacatgattatgaagat
gacacacagctcatgctgctgtcgatgggctcagaaagcagcagaggaggaacgatggct
ggagagaaggagccggatccgggtgctcaaggagcccccagtggctctcaacagagtgaa
agcccgtttttcatgctggggaaggtggtgatgcagcagagctacgtctgtgctctcatc
gccatgatggtttggagcatcacataccacagctggctgacctttgtgctgctgctgtgg
gcgtgtctcatctggatgctgcgtgccagacggcacgccgccaccctgtgctctcccttc
atcctgctctatggcctggctctgtgctgtctgcagtacgtctgggccatggagctgcag
cccgagctgcccaccactgtgggcaccatgagcctcagacaactgggactagacagagcc
cagcacccctgtttgagactgggagctatgctcttgtttactttgaccttctggctgtta
gtacgtcaatcagtgaaggaaaacttcaccaggaagaagaaaatgaccacacccctacag
gaggtcacgacaggagagggggctggtgaggagtcagtgctcaaggttctgggaggcatg
ttgatgagcagtcatgccaaatactggatctatgtgtgtggagggatgttcatcatggtg
tcctttgctggaaaactggtcggatacaaaatcatctacatgctgctgttcctcctctgc
ctctgcctctatcaggtgtactattctctgtggagacgtctgttgaagctcttctggtgg
cttgttgtcgcctacacgatgctggtgctgatctgcatctacacttaccagtttgaagac
ttccccggatactggagaaactgtactggttttactgaagaacagttggcagcgattggt
ctggagacgtttgctctgtctgaactcttcagcagtattctgatccccggcttcttcctg
ttggcctgtattctgcagctgcactacttccacaagcccttcatgaggatcactgacctg
gagcatgttacaccgatagacaagaagaagcacagtgagaggacggagcggattggctcc
ggtcatgtgggaatgaactttgaagaggaagacctcttgacgaacattgatgaggaacct
gaagacgaaggtgaaaaaacaacagtggagttgatgtccagtaagtggggcttggtgatg
gacaggttgttggtgctgtccagacgcttctctgacactctcacacaaattcaaatgttt
ctctggaggcttctggagctccacatcctcaagatggtggccttcttctccatgtgggtt
tcactcgaagagccatctgtcatgaacctggtcttggtggtgctgtggtctctggcgatg
ccctacagtcgcttcgggcccatggcttcctgtctgtcaacagtctgggtgtgtgtcatc
atcgtgtgtaagatgctgtaccagctcagtgtcgtcaaccccgttgagtactccagtaac
tgcagcctgcctttaacaaatgaaaccaacctgctaccagaagagatgatgaactcctct
ctgtaccaggagccggtggacccagccaaatggttcggcatcaggaaagatgccacagta
ctggggtacagcaagaatcacttaatagtgctgatgttgttggtttttgaggcgacggtg
aatcgtcaccagactcaccactaccgccagctccaacggtctccgcccgccatcccggct
ctgttccctgctgccaccagggacactctagaccagggcctcataccttgcctcaagtac
ttgctcaactacaccttctacaagtttggattagagatttgtttcctgatgacggtgaat
gtgattggccagcggatgaacttcttggtgataatccatggatgttggttggtagccatc
ttggtgaggcggcggcgggcagctattgccaggatctggcccaaatactgtctctttctg
tccatcttcatgatctaccagtacctcctgtgtgtgggcatgccgcctgctctctgcata
gactacccatggcggtggaacactccggtgttgataaactcagctctcgttaaatggatc
ttcctgccggacttctacactgtgccaaactccaaaaacctcatagcggactttgtgctg
ctgatgtgtgcgtcccagcagtggaaggtgtttgagtgtgagcacacagaggagtggatg
gttctggcaggagagaacacagatgaccctgagccaatgaaaggtcgactatttaacccc
gcacccaacttcatcaactgcaggagttacctggacatggctaaagtgctggtgtttcgc
cacctcttctggtttgtgctgtccgtggtcttcatcaccggtgccaccagaatctctgtg
tttggattgggctaccttctggcctgcttcttttttctgctgttcgggaccaagctgctg
gtcaaatcatccagaacccgcctcgccctgtgggactgtctcatcatctacaacgtggca
gtcattgtatccaaaaatatgttatcgatcctggcatgtgtgtttgtgtttgagatgcag
aagggcttctgttgggtgattcaactcttcagcctggtttgcacggtcaaaggatactat
gacccaaacgcagtgagtgacaagacctgcagcctcccggtagaagaggccggggtcatc
tgggacagtatctgttttctgtttctgttgctgcagaggagggtcttcctcagttactac
ttcctgcatgtgatagcagagctgcaggcttctgccaaacaggcctcaagggggtttggg
ctcttcagagccagtatcgtgaagaacattaagttccaccagcaagctgagaggaaatcc
ctgtctcagctcaagagatcgatgcagagaattcgtgccaagcagcagaagcatagagat
ggacacaaaacaagtgaagattctaacgagagtcagaatgctgagaccccgacaaaaaag
aagagttccaggaagaaaaattggtcccagccgtggttggaccatgctacagtgctccac
tcaggagagtactacctgtttgaatcagacagtgaggatgaagaggactctgaagaacaa
aagccccaaaaacagactgcctgtcagttggcgtacctggcgtgggtgaccagtgtgaaa
acagctttgaaagaacgtcagagacaccaacaccatttgagaaggattgagagaaaagag
aaagagagagaagcaagagttgattcacaaccggaagctttttcagctctaggttgtggg
gaaaatgatgtgtttgaggaccctggccttcaagcagaggagccagaagaaaaggagtcc
agtcacggcaagatggttcagaggatcttgaatatcctgcacttattactggccatagtt
ctggcgattgtagatggactgactcagtggctcaacctgctgactaaacagtacagagag
acatcgactgttctgtgcaatgagcgctacttcatcttacacaagatacagcagcatcat
acaacagcagactccacagacgaccaggtatctcagggcagtgagagtcccacactggac
acttgtttggatgagactgatgccgactccaccggacacagctgcctcaagggggatagc
aggggtgcgacagaccgctctacccccaagccaaggctcaacagcattggaaacctcttg
agtccagaagaatccccatccagcagcatggcgctcgtaccggcaccatccaaacaacaa
cacagacactcaagaacagccagcgagcttctgggagaaaggcagttcttcattgaggag
ctagaacagagcagagagttctacaacaaccagagccgcctgctgaagctgctgtttgcc
atgtacaacctgctggcagccaactcagagctggtctgctatttcatcatcgtgttgaac
aacgcggtcagcgcctccgtgatatccctggctctccccatcctggtgttcctatgggcg
atgctggctgttccaagaccaaccaagaagttttggatgactgctatcgtctacacagag
gtgatggtggtggtgaaataccttttccagtttggattctttccctggaacagtgttcac
gagatgactttaaatgaagacaaacctttcttcccgcctcgcatcctgggcctggagaag
attgacaattacatcagatatgatcttcttcagctgctggctctgttttttcacaggtcc
cttctcatgcgctatggcctgtgggaccacgaaggccccctggaggagcagagcccctca
ccagaaagttgtaaggatgaagggaaaaatatagaaggagatgaagatggaaggaagaag
gagggcagaggggaagaggaggagaacagagttagctcaacatccaccctggacaacctg
gaaattagtgaactggaccaacttgaaaaggatatggttgacgatgcggaaccgagtacc
agctctgctgaaccagcagccagtgggtcaaacgatgggcatgaaactccgtccgggctg
aaggacagctcggatcctcccggcagaccgagggaggataagacggtcggagacgatgag
caggaggccaaggaagtcccgaagaaaagcagcagtctccgcttccgcatgaaacctaaa
aaagacaaacaacgacacagcaaagtggagcccacagttgagactgcagagccctgtgca
gcagaaccagtgaagaaggagcagaaaggcagccggagagaggctgccagtcggagattg
ctggcggtgggagacaagatcaaacaagtcctcctctccggtattcagagtgtttacagg
ccaacgcagggcttcttcaggggtattctccatgccgagtatcggactgccacagatgtt
tatgcattcatgttcctgactgatgtcgttgacttcatcatcatcatctttggcttttgg
gcttttgggaaacacagtgcagcagctgatatagcctccaccctttcagaggaccaagtt
ccagaggccttcctagtgatgctgctccttcagttcagcaccatgatcatcgacagagcc
ttgtacctgcgcaaggctgtctttggaaaactcatcttccaggtgattcttgtgtttggg
atccacctgtggatgttcttcatcttgcctgctgtcactgaaaggaagttcaatcagaac
tttgtggcccagctttggtactttgtcaagtgtatttacttcggcctgtcagcctatcag
atccgctgtggataccccactcgtatccttgggaatatcctcaccaagaaatacaaccat
ctcaacctctttctcttccaagggttccgtctggtgccattcctagtggagctgcgagcg
gtgatggattgggtttggactgacaccacgctgtctctgtcaaactggatctgtgtggag
gatatttatgccaacatcttcatcatcaaatgcagccgtgagacagagaagagataccca
cagcccaaaggacaaaagaagaagaagatagtgaaatatggcatgggtggactcatcatc
ttcttcttgatctgcatcatctggtttccccttctcttcatttcattggtcagatcagtt
gtgggtgtggtcaatcaccccattgatgtcactgtgactgtcaagttgggaggatatgag
tccctgttcaccatgagtgtgcaacagcagtccatccagccctttacacaggttgaatat
gaccaactcacccaccactttggagacaatgcggtagccatgcagttcatcacactctac
ggttatgaggatattgtgacggccatggttgaaggaagttcaggatccgtatggaggatc
agccctccgagcagacaggaagtaattaaagaactacttggaagtcctgttcacctcaca
ctacgcctggcctggactttccagagagacttaggtaaaggagggacggtggaacacacg
tttgacaaacactctatagacctggaacctggaaacccagtccgagcagatctggcctca
ctactggttggcaatcgcagcgagcctgtgcatgttcctcatatgatcccgaactacatc
cgtgcccccaatggagcagaggccaaaccagtcaatcaactttataaaggtgaagatggt
tacctgaatataaccctgtccctgaagagtgacaggtcactgaatggcagtgggaaccag
gagtggtgggacattgccattgcaggttgtgcgtcctcctcatgtggggttttgcccatc
gtcatattcaatgacaaagtcagtccacccagcctgggtttcctggctggatatgggatc
atgggtctttatgtgtctgtggttttagtcattggaaagtttgtacgtggcttctccagt
gagatctcccattccatcatgtttgaggagctgccctgtgtggaccgcgtcctgaagctc
tgcacagacatctttctggtgcgtgagacaggagagctggagctagaagaggagctgtac
tccaaactgatcttcctctatcgatccccagagactatgattaaatggacccggaacatg
cacagccgagaacataacagatactga
DBGET
integrated database retrieval system
