Pseudoliparis swirei (Mariana hadal snailfish): 130206940
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Entry
130206940 CDS
T09868
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130206940 (zeb2a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
130206940 (zeb2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_6
Zn_SUZ12
zf-C2H2_15
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
130206940
NCBI-ProteinID:
XP_056291210
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All DBs
Position
2:23771117..23817500
Genome browser
AA seq
1206 aa
AA seq
DB search
MKPHVMAEGPRCKRRKQANPRRKNELTFEDVVETSSETDEDDHPLVPEENGLVNGDGGGG
RGGEDEEACSPASVPPLEASPRVAQALLSYRDQEVSDGLQDPHQHWRGDTNRYPNDECEA
GNRTGSVKRPLELDDFFLKRKPEDGDGHPATIAQYLQRSDTAVIYPEAPEEVKRPGTPDA
TDQAESEHDLPPGAPDAFAQMLTCPYCERGYKRLTALKEHIKYQHERSEESVCCPLGDGF
GHRAQLERHMTTHRPAGDQPPPFSDAATNRKFKCNECGKAFKYKHHLKEHLRIHSGEKPY
ECSNCKKRFSHSGSYSSHISSKKCIGLIGINGRVRNGNNGKPGSSSNTTTSSPGSPALAQ
LRHKLENGRPHAPSDQHGQLDIKPEPMDFNEYRLLMASQHGFGGSGVYPNSRGGSPLAIH
SSSQSPLQHLGGLGLDHPLLGFSGSFCNNLSEVQKVLQIVDNTVCRQKMDGNPEEISKLR
AYMKELGAQMEEQRLVQAGFQVVGDGSPTKSIIDYTLEKVNEAKSLIHDSKRQVDIKKEK
LNHSPELSCEEKSHDGQNQFRPFSCQYCKETFAGPIPLHQHERYLCKMNEEIQAVLQPTD
SSPAGRCGTMPTELSTSEQATNPINPFKNHVSVLKAYFAMNTEPNSEELLKISIAVGLPQ
EFVKEWFAQWKNQKHHESHLRKKSPPPERGGLDVNHSFSRSQVSLPTADLHRGFTNGDAS
HRLTKANQFTGNRQRKGDKPLDPLDHLRRNTPSPLNLSSTSSKNSQSSCYTPNSLASEEA
HGDIPLDLSLPKLMALKLMSAREKQPRLNGFIIERNGEALRREQVSRPMDLVNIKKEVLY
SDGGGNSVHQLEKSTSPIFGINPFSGGPVYNALPSHGAFPPATFMSPAQATIPGLRPYPG
LDPMSFLPHMAYTYATEAATFAEMQQRRKYQRKQGFQGDLLDGTADYLSGLDDLTDSDSL
LSKKKMKKTESGMYACDLCDKTFQKTSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEH
SRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAAEREAQGEAGGGAGG
GGGGGLEEPTEVLMRRAYLQGLGPLGYSDPEDQREDGGTITRDEGGRREERDEDETYEEV
TDRREESFREGDEVEEEEEEEEEEEEERDSKIQMDSTMDDKGRDTTQLMDVSSREGKTDR
KSEPED
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcacgtcatggcggagggaccccgctgcaagaggcgcaagcaggccaacccg
cggaggaagaacgagttgacctttgaggatgtggtggagacgagttcagagaccgacgag
gacgaccatcctctggtccccgaggagaacggcctggtaaacggagacggaggaggagga
agaggaggagaggatgaggaggcgtgcagtccggccagcgtgccccctctggaggcgtcg
ccccgggtcgcccaggccctgctgtcctaccgggaccaggaggtctcagatggactccaa
gacccccatcagcactggagaggggacaccaacagataccccaatgacgagtgtgaagct
ggaaacagaacagggtcagtgaagcgaccgctggagttggacgacttcttcctgaaacgc
aagccggaggacggagacggtcacccggcaaccatcgcccagtacctgcagcgcagcgac
accgccgtcatttacccagaagccccggaggaggtgaagcgcccgggcaccccggacgcc
accgaccaggccgagagcgagcacgacctgccgcccggcgcccccgacgccttcgcccag
atgctcacgtgtccgtactgcgagcgcggctacaagcgcctgacggccctgaaggagcac
atcaagtaccagcacgagaggagcgaggagagcgtctgctgcccgctgggcgacggcttc
ggccaccgcgcccagctggagcgtcacatgaccacgcacagaccggccggagaccagccg
ccgccgttcagcgacgccgccacaaaccgcaagttcaaatgcaacgagtgtggaaaagcc
ttcaagtacaagcatcacctgaaggagcatcttcgcatccacagcggtgagaagccgtac
gagtgctccaactgtaagaagcgcttctcccactccggctcctacagctcccacatcagc
agcaagaagtgcatcggcctgatcggcatcaacggacgggtgcgcaacggcaacaacggc
aaacccggttcctcctccaacaccacgacctcatcgcccggaagccccgccctcgcacag
ctccgccacaaactggaaaacgggcgcccgcacgccccttcagaccaacatggtcaactg
gacatcaaacctgagccaatggacttcaacgagtaccggctgctgatggcttctcagcac
ggatttgggggatcgggtgtctacccgaacagccgtggtggaagccccctggccatccac
agctcctcccagagcccccttcaacaccttggagggctggggctggaccatcctctgctg
ggcttctctggttctttctgtaacaatctgagcgaggtgcagaaggtgcttcagatagtg
gacaatacagtgtgcaggcagaagatggatgggaacccagaggagatctccaagctcagg
gcctacatgaaggagctgggggcccagatggaggagcagaggctggtgcaggccggtttc
caggtggtgggcgatggcagccccacaaagagcatcatcgactacacgctggagaaggtt
aacgaggccaagagtctgatccacgactctaagaggcaagtggacatcaagaaggagaag
ctgaaccactcacccgagctcagctgtgaggagaaatctcacgatggccagaatcagttc
cgaccattctcttgccagtactgcaaggagaccttcgccgggccaatccccctgcatcaa
cacgagcgctacctgtgcaaaatgaacgaggagatccaagcggtcctgcagccgacggac
agcagtcctgccggacgctgcgggacgatgcccactgagctgtccactagcgagcaggcc
accaatcccatcaaccccttcaagaaccacgtgtcggtgctcaaggcctactttgccatg
aacactgagcccaactcagaggaactgctcaagatttcgattgctgtcggccttcctcaa
gagtttgtcaaggagtggtttgcccagtggaagaaccaaaaacatcacgaaagtcatctg
aggaagaagtcacccccccctgaacggggcgggctggatgttaaccacagctttagccgg
tcacaagtgtcccttccgacggcagatttacaccgaggtttcactaacggtgacgcctcc
cacagactcacaaaggccaaccagtttacaggcaacaggcagagaaaaggggacaaacca
ctagaccccttagaccacttgagacgcaacactccatcacccctcaacctttcctctact
tcctccaaaaactctcagagcagctgttacactccaaacagcctggcttctgaggaggcc
catggggatataccactggatctgtcgctgcccaaactcatggccctaaagctcatgtct
gcgcgggagaagcaacccaggctcaacggtttcatcattgagcgcaatggcgaggcactg
cgtcgagaacaggtgtccaggcccatggacctggtcaacatcaagaaagaagtcctgtac
tccgacggtggaggtaactctgtccaccagctggagaaaagcaccagtcccatctttggg
attaatcccttttctgggggtcccgtctacaacgctctgccatctcacggagcgtttcct
ccagccaccttcatgtctcctgcccaggccaccatcccgggcctcaggccctacccgggc
cttgaccccatgagcttcctgcctcacatggcctacacctatgccaccgaggcagccacg
tttgctgaaatgcagcagaggagaaagtaccaacggaaacaaggtttccagggagatctg
ctggatgggacggcggactatctgtcgggcctggacgacctgacagacagcgattcgctg
ctgtccaagaagaagatgaagaagactgaaagtggtatgtacgcgtgtgacttgtgcgac
aaaacattccagaagaccagttccctcctaagacacaaatatgagcacacagggaagcgc
cctcaccagtgtcagatctgtaagaaggccttcaagcacaagcaccacctcatcgagcac
tcgcggctgcactccggggagaaaccctaccagtgcgacaagtgcggcaaacgcttctcc
cactcgggctcgtactcgcagcacatgaaccaccgctactcgtactgcaagagggaggcg
gaggagcgcgaggcggccgagagggaggcccagggcgaggctgggggaggagcaggagga
ggaggaggaggaggtctggaggagcccaccgaggtgctgatgaggagggcctaccttcag
gggctcggaccgctcgggtactcggacccagaggaccagcgggaggacggcggtacgatc
acgagggacgagggaggaagacgggaggagagggacgaagacgagacgtacgaggaggtg
acagacaggcgggaggaaagtttcagggaaggagacgaggtagaggaggaggaggaggag
gaggaggaggaggaagaggaaagagacagcaagatccagatggactcaacgatggacgac
aagggcagagacacgacgcagctgatggacgtgagctcacgagaagggaagacggacaga
aagtcagagccggaggactga
DBGET
integrated database retrieval system
