Pseudoliparis swirei (Mariana hadal snailfish): 130206954
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Entry
130206954 CDS
T09868
Name
(RefSeq) high-affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130206954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130206954
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130206954
BRITE hierarchy
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
130206954
NCBI-ProteinID:
XP_056291224
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Position
17:complement(21356355..21387713)
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AA seq
557 aa
AA seq
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MVLNIPGLAVMVFFYLLVLGIGIWASFKSKREAKKCDGDKTDMALLGNRGISLVVGIFTM
TATWVGGGFIVGTAEAVYNPSMGLIWAVMPIAATMCFIIGGLFFAEPMRNSKYVTMMDPF
QIKYGKVPTAALSLASLASEIMWVTGTLIGLGVTMSVILNLSYTVSIWISAAVAITYTLM
GGLYSVAYTDIIQLILIFISLWLCVPFAMMGPAVVDITETAYNSTFHSPWVGTLEANRAW
MWIDNFLLLGLGNLGLQNFHQRTLSAASSSTAKITCFVAAFIVPMLGIPPILIGAVAAST
NWNLTSYGSPSPYDRGEAGLILPLVLQHLTPTYISIIGIGAVAAAVMSSTDSALLSAASI
FTANIYRNILRPQASEGEIQWVIRLSVVFVGLAGTSLTFLDNSVLMIWMLRSDLTYTLML
PQLVCVLFFSVSNGYGAVLGCAVGVVLRVLCGEPLIGLEPVLKFPGCTLVNGVYVQRSPI
RTICMLSAFSSILLFSYLAELIFTRDLIPEKWDVFNVKAQYSKQSHGDAVSETKDEKLKE
PNENSDVCEPMIESTCL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaacatccccggcttggccgtcatggtgttcttctacctgctggtcctcggc
atcggcatctgggcttctttcaagtccaaaagggaagccaagaagtgcgacggggataag
accgacatggcgctgcttggcaaccggggcatcagcctggttgtcggcatcttcaccatg
acagcgacgtgggttggaggtggattcatcgtgggcaccgcggaggcggtctacaacccc
tccatgggactgatctgggccgtgatgcccatcgcggccaccatgtgcttcatcatcggt
ggcctattcttcgccgagccgatgagaaacagtaaatacgtcaccatgatggatccattc
cagatcaaatatggaaaagtaccgacggccgctctgtctctggcgtcgctcgcatcagag
atcatgtgggtaacaggaacactcataggattaggtgtaacgatgagcgtgatcctgaat
ttgtcctacaccgtgagcatctggatttcggctgctgtggccatcacctacaccctgatg
ggaggcctctactctgtggcctacacggacatcatacagctcattctcattttcatcagc
ttgtggctgtgtgttcccttcgctatgatgggccccgccgtggtggacatcaccgagacg
gcctacaactccaccttccactctccgtgggtcggaaccctggaggccaaccgggcctgg
atgtggatcgataactttctactcctgggtttagggaacttgggtcttcagaacttccac
cagaggacgctgtcggccgcctcctcgtccacggccaagatcacctgcttcgtcgccgcg
ttcatcgtccccatgttgggcatcccccccatcctgatcggtgcagtggcggcatctaca
aactggaacttgacctcttacggttctccgtctccgtacgaccgcggggaggcggggctc
atcctgcccctcgtgctgcagcacctcaccccgacctacatctccatcatcggcatcggg
gcggtggccgccgccgtcatgtcgtccaccgactccgccctgctgtccgcggcctccatc
ttcaccgccaacatctacaggaacatcctgaggccccaggcgtccgagggagagatccag
tgggtgatccggctctccgtggtgttcgtgggcctggccggcacgtccctcaccttcctg
gacaacagcgtgctgatgatctggatgctgcggtccgacctcacctacaccctcatgctg
ccgcagctcgtctgcgtcctcttcttcagcgtctccaacggctacggcgccgtgctgggc
tgcgcggtgggcgtggtgctgcgggtgctgtgcggcgagccgctgatcgggctggagccc
gtactcaagttcccagggtgcactctggtgaacggcgtctacgtccagcgctcccccatc
aggaccatttgcatgctgtccgccttttcgtcgatcctgctgttctcctacctggcggag
ctgatcttcaccagagacctgatcccggagaagtgggatgtttttaacgtgaaggcgcag
tactcgaaacagtcacacggcgacgccgtgtccgaaaccaaggacgagaagttgaaagaa
cccaatgagaacagtgacgtgtgtgaacctatgatagagtccacgtgtttataa
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